RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B SWC4P53201 476 aa-0.53□□□□□ -2.49
snR39BsnR39B MAL12P53341 584 aa-0.53□□□□□ -2.49
snR39BsnR39B CTF19Q02732 369 aa-0.53□□□□□ -2.49
snR39BsnR39B BOP2Q06150 570 aa-0.53□□□□□ -2.49
snR39BsnR39B MSA1Q08471 629 aa-0.53□□□□□ -2.49
snR39BsnR39B COX5AP00424 153 aa-0.54□□□□□ -2.5
snR39BsnR39B RPN12P32496 274 aa-0.54□□□□□ -2.5
snR39BsnR39B YHR180WP38868 163 aa-0.54□□□□□ -2.5
snR39BsnR39B ARC15P40518 154 aaRIP-Chip data-0.54□□□□□ -2.5not detected
snR39BsnR39B JHD2P47156 728 aaPredicted RBP-0.54□□□□□ -2.5
snR39BsnR39B VPS60Q03390 229 aa-0.54□□□□□ -2.5
snR39BsnR39B SLD7Q08457 257 aa-0.54□□□□□ -2.5
snR39BsnR39B YDR262WQ12331 272 aa-0.54□□□□□ -2.5
snR39BsnR39B MRPL23Q12487 163 aaPredicted RBP-0.54□□□□□ -2.5
snR39BsnR39B TFB5Q3E7C1 72 aaPredicted RBP-0.54□□□□□ -2.5
snR39BsnR39B FMP49A0A023PZB3 126 aa-0.55□□□□□ -2.5
snR39BsnR39B YHR139C-AO13536 103 aa-0.55□□□□□ -2.5
snR39BsnR39B RPL6BP05739 176 aaKnown RBP-0.55□□□□□ -2.5
snR39BsnR39B STE3P06783 470 aa-0.55□□□□□ -2.5
snR39BsnR39B MSS116P15424 664 aaKnown RBP-0.55□□□□□ -2.5
snR39BsnR39B SUA5P32579 426 aa-0.55□□□□□ -2.5
snR39BsnR39B PRS4P38063 326 aaPredicted RBP-0.55□□□□□ -2.5
snR39BsnR39B PEX18P38855 283 aa-0.55□□□□□ -2.5
snR39BsnR39B NPT1P39683 429 aaKnown RBP-0.55□□□□□ -2.5
snR39BsnR39B RPA34P47006 233 aaPredicted RBP-0.55□□□□□ -2.5
snR39BsnR39B TOS8P53147 276 aa-0.55□□□□□ -2.5
snR39BsnR39B PEX31P53203 462 aa-0.55□□□□□ -2.5
snR39BsnR39B YGR168CP53293 376 aa-0.55□□□□□ -2.5
snR39BsnR39B ARP5P53946 755 aa-0.55□□□□□ -2.5
snR39BsnR39B RPL6AQ02326 176 aaKnown RBP-0.55□□□□□ -2.5
snR39BsnR39B YMR279CQ03263 540 aa-0.55□□□□□ -2.5
snR39BsnR39B ATC1Q04005 294 aa-0.55□□□□□ -2.5
snR39BsnR39B NEJ1Q06148 342 aa-0.55□□□□□ -2.5
snR39BsnR39B RRP42Q12277 265 aaPredicted RBP-0.55□□□□□ -2.5
snR39BsnR39B YPR064WQ12492 139 aa-0.55□□□□□ -2.5
snR39BsnR39B IZH4Q99393 312 aa-0.55□□□□□ -2.5
snR39BsnR39B RPC40P07703 335 aaKnown RBP-0.56□□□□□ -2.5
snR39BsnR39B YHR212W-AP0CX91 67 aa-0.56□□□□□ -2.5
snR39BsnR39B PET9P18239 318 aaKnown RBP-0.56□□□□□ -2.5
snR39BsnR39B MNE1P24720 663 aa-0.56□□□□□ -2.5
snR39BsnR39B UGX2P32772 223 aa-0.56□□□□□ -2.5
snR39BsnR39B RPS0AP32905 252 aaKnown RBP-0.56□□□□□ -2.5
snR39BsnR39B RCN1P36054 211 aa-0.56□□□□□ -2.5
snR39BsnR39B ADH5P38113 351 aaKnown RBP-0.56□□□□□ -2.5
snR39BsnR39B RXT2P38255 430 aa-0.56□□□□□ -2.5
snR39BsnR39B SSH1P38353 490 aaKnown RBP-0.56□□□□□ -2.5
snR39BsnR39B YHR125WP38831 101 aa-0.56□□□□□ -2.5
snR39BsnR39B YJL055WP47044 245 aa-0.56□□□□□ -2.5
snR39BsnR39B EMP46Q12396 444 aa-0.56□□□□□ -2.5
snR39BsnR39B PAR32Q12515 295 aaKnown RBP-0.56□□□□□ -2.5
snR39BsnR39B YNL146C-AQ3E7Z1 64 aa-0.56□□□□□ -2.5
snR39BsnR39B ACC1Q00955 2233 aaKnown RBP-0.56□□□□□ -2.5
snR39BsnR39B YMR316C-AI2HB70 103 aa-0.57□□□□□ -2.5
snR39BsnR39B STP22P25604 385 aa-0.57□□□□□ -2.5
snR39BsnR39B CAM1P29547 415 aaKnown RBP-0.57□□□□□ -2.5
snR39BsnR39B SPT4P32914 102 aaPredicted RBP-0.57□□□□□ -2.5
snR39BsnR39B TVP38P36164 337 aa-0.57□□□□□ -2.5
snR39BsnR39B COS8P38723 381 aa-0.57□□□□□ -2.5
snR39BsnR39B FET3P38993 636 aa-0.57□□□□□ -2.5
snR39BsnR39B YFL065CP43539 102 aa-0.57□□□□□ -2.5
snR39BsnR39B IBA57P47158 497 aa-0.57□□□□□ -2.5
snR39BsnR39B APC9Q12107 265 aa-0.57□□□□□ -2.5
snR39BsnR39B PSY3Q12318 242 aa-0.57□□□□□ -2.5
snR39BsnR39B SMC6Q12749 1114 aa-0.57□□□□□ -2.5
snR39BsnR39B RPL9AP05738 191 aaKnown RBP-0.58□□□□□ -2.5
snR39BsnR39B RPL18AP0CX49 186 aaKnown RBP-0.58□□□□□ -2.5
snR39BsnR39B RPL18BP0CX50 186 aaKnown RBP-0.58□□□□□ -2.5
snR39BsnR39B CWP1P28319 239 aa-0.58□□□□□ -2.5
snR39BsnR39B SER33P40510 469 aa-0.58□□□□□ -2.5
snR39BsnR39B RPL9BP51401 191 aaKnown RBP-0.58□□□□□ -2.5
snR39BsnR39B YNL146WP53906 100 aa-0.58□□□□□ -2.5
snR39BsnR39B YMR209CQ03648 457 aa-0.58□□□□□ -2.5
snR39BsnR39B TAF9Q05027 157 aa-0.58□□□□□ -2.5
snR39BsnR39B ARR2Q06597 130 aa-0.58□□□□□ -2.5
snR39BsnR39B PBP4Q07362 185 aaKnown RBP-0.58□□□□□ -2.5
snR39BsnR39B NFI1Q12216 726 aa-0.58□□□□□ -2.5
snR39BsnR39B SEC22P22214 214 aa-0.59□□□□□ -2.5
snR39BsnR39B VMA11P32842 164 aa-0.59□□□□□ -2.5
snR39BsnR39B YHL049CP38722 271 aa-0.59□□□□□ -2.5
snR39BsnR39B YML6P51998 286 aa-0.59□□□□□ -2.5
snR39BsnR39B YGL185CP53100 379 aa-0.59□□□□□ -2.5
snR39BsnR39B SPP2Q02521 185 aa-0.59□□□□□ -2.5
snR39BsnR39B DIG2Q03373 323 aaKnown RBP-0.59□□□□□ -2.5
snR39BsnR39B YLR030WQ07967 263 aa-0.59□□□□□ -2.5
snR39BsnR39B BBP1Q12365 385 aa-0.59□□□□□ -2.5
snR39BsnR39B AI5_BETAQ9ZZX0 354 aa-0.59□□□□□ -2.5
snR39BsnR39B SIR4P11978 1358 aa-0.59□□□□□ -2.5
snR39BsnR39B GRX2P17695 143 aaKnown RBP-0.6□□□□□ -2.51
snR39BsnR39B FZF1P32805 299 aa-0.6□□□□□ -2.51
snR39BsnR39B SRY1P36007 326 aa-0.6□□□□□ -2.51
snR39BsnR39B RPC37P36121 282 aa-0.6□□□□□ -2.51
snR39BsnR39B JNM1P36224 373 aa-0.6□□□□□ -2.51
snR39BsnR39B YGL034CP53186 121 aa-0.6□□□□□ -2.51
snR39BsnR39B YPR011CQ12251 326 aa-0.6□□□□□ -2.51
snR39BsnR39B YDL180WQ12301 547 aa-0.6□□□□□ -2.51
snR39BsnR39B YAL064W-BO13512 126 aa-0.61□□□□□ -2.51
snR39BsnR39B PRM9P39551 298 aa-0.61□□□□□ -2.51
snR39BsnR39B EDC3P39998 551 aaKnown RBP-0.61□□□□□ -2.51
snR39BsnR39B BOL2P53082 120 aa-0.61□□□□□ -2.51
snR39BsnR39B SLX9P53251 210 aaPredicted RBP-0.61□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms