RNA–Protein interactions for RNA: YOL139C

CDC33, Transcript of mRNA cap binding protein and translation initiation factor eIF4E, yeast

Gene CDC33, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC33	YOL139C	PEX4	P29340	183 aa		1	□□□□□ -2.25
CDC33	YOL139C	RPC25	P35718	212 aa		1	□□□□□ -2.25
CDC33	YOL139C	MAL32	P38158	584 aa		1	□□□□□ -2.25
CDC33	YOL139C	CIS3	P47001	227 aa		1	□□□□□ -2.25
CDC33	YOL139C	MAL12	P53341	584 aa		1	□□□□□ -2.25
CDC33	YOL139C	AAH1	P53909	347 aa		1	□□□□□ -2.25
CDC33	YOL139C	RSM10	Q03201	203 aa		1	□□□□□ -2.25
CDC33	YOL139C	ATC1	Q04005	294 aa		1	□□□□□ -2.25
CDC33	YOL139C	BOP2	Q06150	570 aa		1	□□□□□ -2.25
CDC33	YOL139C	VAC14	Q06708	880 aa		1	□□□□□ -2.25
CDC33	YOL139C	RPL4A	P10664	362 aa	Known RBP	0.99	□□□□□ -2.25
CDC33	YOL139C	GCD2	P12754	651 aa	Predicted RBP	0.99	□□□□□ -2.25
CDC33	YOL139C	VMA2	P16140	517 aa	Known RBP	0.99	□□□□□ -2.25
CDC33	YOL139C	SCL1	P21243	252 aa	Known RBP	0.99	□□□□□ -2.25
CDC33	YOL139C	MDH2	P22133	377 aa		0.99	□□□□□ -2.25
CDC33	YOL139C	SHC1	P39000	512 aa		0.99	□□□□□ -2.25
CDC33	YOL139C	RPL4B	P49626	362 aa	Known RBP	0.99	□□□□□ -2.25
CDC33	YOL139C	PEX10	Q05568	337 aa		0.99	□□□□□ -2.25
CDC33	YOL139C	BCP1	Q06338	283 aa		0.99	□□□□□ -2.25
CDC33	YOL139C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.99	□□□□□ -2.25	not detected
CDC33	YOL139C	POM33	Q12164	279 aa		0.99	□□□□□ -2.25
CDC33	YOL139C	DCN1	Q12395	269 aa		0.99	□□□□□ -2.25
CDC33	YOL139C	SPT7	P35177	1332 aa		0.98	□□□□□ -2.25
CDC33	YOL139C	YGL010W	P25338	174 aa		0.98	□□□□□ -2.25
CDC33	YOL139C	CWP1	P28319	239 aa		0.98	□□□□□ -2.25
CDC33	YOL139C	HIS2	P38635	335 aa		0.98	□□□□□ -2.25
CDC33	YOL139C	DSE2	P38844	325 aa		0.98	□□□□□ -2.25
CDC33	YOL139C	CTF19	Q02732	369 aa		0.98	□□□□□ -2.25
CDC33	YOL139C	YMR111C	Q04461	462 aa	Predicted RBP	0.98	□□□□□ -2.25
CDC33	YOL139C	DSF1	P0CX08	502 aa		0.97	□□□□□ -2.25
CDC33	YOL139C	YNR073C	P0CX09	502 aa		0.97	□□□□□ -2.25
CDC33	YOL139C	ICL1	P28240	557 aa	Predicted RBP	0.97	□□□□□ -2.25
CDC33	YOL139C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.97	□□□□□ -2.25	not detected
CDC33	YOL139C	YKR045C	P36138	183 aa		0.97	□□□□□ -2.25
CDC33	YOL139C	YBR220C	P38318	560 aa		0.97	□□□□□ -2.25
CDC33	YOL139C	VTC1	P40046	129 aa	RIP-Chip data	0.97	□□□□□ -2.25	not detected
CDC33	YOL139C	BMT5	P40493	336 aa		0.97	□□□□□ -2.25
CDC33	YOL139C	SER33	P40510	469 aa		0.97	□□□□□ -2.25
CDC33	YOL139C	SLD7	Q08457	257 aa		0.97	□□□□□ -2.25
CDC33	YOL139C	EMP46	Q12396	444 aa		0.97	□□□□□ -2.25
CDC33	YOL139C	RAS2	P01120	322 aa	Known RBP	0.96	□□□□□ -2.26
CDC33	YOL139C	COS8	P38723	381 aa		0.96	□□□□□ -2.26
CDC33	YOL139C	ARC15	P40518	154 aa	RIP-Chip data	0.96	□□□□□ -2.26	not detected
CDC33	YOL139C	NBP35	P52920	328 aa		0.96	□□□□□ -2.26
CDC33	YOL139C	ERG25	P53045	309 aa		0.96	□□□□□ -2.26
CDC33	YOL139C	YGR026W	P53217	278 aa		0.96	□□□□□ -2.26
CDC33	YOL139C	TIM21	P53220	239 aa		0.96	□□□□□ -2.26
CDC33	YOL139C	PRO2	P54885	456 aa	Known RBP	0.96	□□□□□ -2.26
CDC33	YOL139C	YMR279C	Q03263	540 aa		0.96	□□□□□ -2.26
CDC33	YOL139C	VBA1	Q04301	562 aa		0.96	□□□□□ -2.26
CDC33	YOL139C	EMI1	Q04406	187 aa		0.96	□□□□□ -2.26
CDC33	YOL139C	SFH1	Q06168	426 aa		0.96	□□□□□ -2.26
CDC33	YOL139C	GPI12	P23797	304 aa		0.95	□□□□□ -2.26
CDC33	YOL139C	MNN9	P39107	395 aa	Known RBP	0.95	□□□□□ -2.26
CDC33	YOL139C	AVT2	P39981	480 aa		0.95	□□□□□ -2.26
CDC33	YOL139C	PEX31	P53203	462 aa		0.95	□□□□□ -2.26
CDC33	YOL139C	CPD1	P53314	239 aa		0.95	□□□□□ -2.26
CDC33	YOL139C	NUP49	Q02199	472 aa		0.95	□□□□□ -2.26
CDC33	YOL139C	MRPS8	Q03799	155 aa		0.95	□□□□□ -2.26
CDC33	YOL139C	CUR1	Q06469	252 aa		0.95	□□□□□ -2.26
CDC33	YOL139C	AKR2	Q12013	749 aa		0.95	□□□□□ -2.26
CDC33	YOL139C	Q0255	P03881	472 aa		0.94	□□□□□ -2.26
CDC33	YOL139C	YHL049C	P38722	271 aa		0.94	□□□□□ -2.26
CDC33	YOL139C	SMD3	P43321	101 aa	Known RBP	0.94	□□□□□ -2.26
CDC33	YOL139C	YJR079W	P47126	109 aa		0.94	□□□□□ -2.26
CDC33	YOL139C	SWS2	P53937	143 aa		0.94	□□□□□ -2.26
CDC33	YOL139C	ARP5	P53946	755 aa		0.94	□□□□□ -2.26
CDC33	YOL139C	PER33	Q12144	273 aa		0.94	□□□□□ -2.26
CDC33	YOL139C	USB1	Q12208	290 aa	Known RBP	0.94	□□□□□ -2.26
CDC33	YOL139C	DDI2	P0CH63	225 aa		0.93	□□□□□ -2.26
CDC33	YOL139C	DDI3	P0CH64	225 aa		0.93	□□□□□ -2.26
CDC33	YOL139C	FRS2	P15625	503 aa	Known RBP	0.93	□□□□□ -2.26
CDC33	YOL139C	PRS4	P38063	326 aa	Predicted RBP	0.93	□□□□□ -2.26
CDC33	YOL139C	PHO88	P38264	188 aa	Predicted RBP	0.93	□□□□□ -2.26
CDC33	YOL139C	YNL260C	P53846	198 aa		0.93	□□□□□ -2.26
CDC33	YOL139C	BUD25	P85052	153 aa		0.93	□□□□□ -2.26
CDC33	YOL139C	PGC1	Q08959	321 aa		0.93	□□□□□ -2.26
CDC33	YOL139C	TPM1	P17536	199 aa	Known RBP	0.92	□□□□□ -2.26
CDC33	YOL139C	SWI3	P32591	825 aa		0.92	□□□□□ -2.26
CDC33	YOL139C	BLI1	P35727	113 aa		0.92	□□□□□ -2.26
CDC33	YOL139C	RCN1	P36054	211 aa		0.92	□□□□□ -2.26
CDC33	YOL139C	MNT4	P53745	580 aa		0.92	□□□□□ -2.26
CDC33	YOL139C	SPO19	Q03029	223 aa		0.92	□□□□□ -2.26
CDC33	YOL139C	RIO1	Q12196	484 aa	Known RBP	0.92	□□□□□ -2.26
CDC33	YOL139C	SME1	Q12330	94 aa	Predicted RBP	0.92	□□□□□ -2.26
CDC33	YOL139C	RPP0	P05317	312 aa	Known RBP	0.91	□□□□□ -2.26
CDC33	YOL139C	RPC40	P07703	335 aa	Known RBP	0.91	□□□□□ -2.26
CDC33	YOL139C	FPR1	P20081	114 aa	Known RBP	0.91	□□□□□ -2.26
CDC33	YOL139C	SEC22	P22214	214 aa		0.91	□□□□□ -2.26
CDC33	YOL139C	EBP2	P36049	427 aa	Known RBP	0.91	□□□□□ -2.26
CDC33	YOL139C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
CDC33	YOL139C	YHR022C	P38763	256 aa		0.91	□□□□□ -2.26
CDC33	YOL139C	SVP26	P38869	228 aa		0.91	□□□□□ -2.26
CDC33	YOL139C	GLE2	P40066	365 aa		0.91	□□□□□ -2.26
CDC33	YOL139C	YKE4	P40544	346 aa		0.91	□□□□□ -2.26
CDC33	YOL139C	STH1	P32597	1359 aa		0.91	□□□□□ -2.26
CDC33	YOL139C	COX5A	P00424	153 aa		0.9	□□□□□ -2.27
CDC33	YOL139C	YHR125W	P38831	101 aa		0.9	□□□□□ -2.27
CDC33	YOL139C	RPL13B	P40212	199 aa	Known RBP	0.9	□□□□□ -2.27
CDC33	YOL139C	PRM10	P42946	383 aa		0.9	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms