RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C YDR209CQ03480 137 aa2.59□□□□□ -2
WHI3YNL197C VPS3P23643 1011 aa2.58□□□□□ -2
WHI3YNL197C SRB4P32569 687 aa2.58□□□□□ -2
WHI3YNL197C YKL075CP36083 450 aa2.58□□□□□ -2
WHI3YNL197C ARN2P38724 620 aa2.58□□□□□ -2
WHI3YNL197C GOS1P38736 223 aa2.58□□□□□ -2
WHI3YNL197C RTC3P38804 111 aaPredicted RBP2.58□□□□□ -2
WHI3YNL197C USE1P53146 245 aa2.58□□□□□ -2
WHI3YNL197C ASI3P53983 676 aa2.58□□□□□ -2
WHI3YNL197C SGT2Q12118 346 aaKnown RBP2.58□□□□□ -2
WHI3YNL197C YCT1Q12235 531 aa2.58□□□□□ -2
WHI3YNL197C YCR102CP25608 368 aa2.58□□□□□ -2
WHI3YNL197C DOA4P32571 926 aa2.58□□□□□ -2
WHI3YNL197C YKT6P36015 200 aaKnown RBP2.58□□□□□ -2
WHI3YNL197C TRR2P38816 342 aa2.58□□□□□ -2
WHI3YNL197C CPR7P47103 393 aa2.58□□□□□ -2
WHI3YNL197C YPL039WQ03080 316 aa2.58□□□□□ -2
WHI3YNL197C YDR222WQ04925 415 aa2.58□□□□□ -2
WHI3YNL197C GIS3Q12418 502 aa2.58□□□□□ -2
WHI3YNL197C YBL112CQ3E7Y4 105 aa2.58□□□□□ -2
WHI3YNL197C RPB4P20433 221 aaPredicted RBP2.57□□□□□ -2
WHI3YNL197C FLC3P53121 802 aa2.57□□□□□ -2
WHI3YNL197C YGL034CP53186 121 aa2.57□□□□□ -2
WHI3YNL197C HST4P53688 370 aa2.57□□□□□ -2
WHI3YNL197C SWT21P53873 357 aaPredicted RBP2.57□□□□□ -2
WHI3YNL197C AAH1P53909 347 aa2.57□□□□□ -2
WHI3YNL197C CWC21Q03375 135 aaKnown RBP2.57□□□□□ -2
WHI3YNL197C GTO3Q04806 366 aa2.57□□□□□ -2
WHI3YNL197C MRX8Q05473 314 aa2.57□□□□□ -2
WHI3YNL197C RFM1Q12192 310 aa2.57□□□□□ -2
WHI3YNL197C POX1P13711 748 aa2.56□□□□□ -2
WHI3YNL197C CUP2P15315 225 aa2.56□□□□□ -2
WHI3YNL197C ERG2P32352 222 aa2.56□□□□□ -2
WHI3YNL197C MID2P36027 376 aa2.56□□□□□ -2
WHI3YNL197C PHO89P38361 574 aa2.56□□□□□ -2
WHI3YNL197C URA8P38627 578 aaPredicted RBP2.56□□□□□ -2
WHI3YNL197C DCR2Q05924 578 aa2.56□□□□□ -2
WHI3YNL197C YPR098CQ06089 161 aa2.56□□□□□ -2
WHI3YNL197C DXO1Q06349 442 aa2.56□□□□□ -2
WHI3YNL197C THO1P40040 218 aaKnown RBP2.56□□□□□ -2
WHI3YNL197C SNZ3P43545 298 aa2.56□□□□□ -2
WHI3YNL197C PGA2P53903 129 aa2.56□□□□□ -2
WHI3YNL197C ADF1Q2V2Q1 113 aa2.56□□□□□ -2
WHI3YNL197C YPL229WQ99395 206 aa2.56□□□□□ -2
WHI3YNL197C JIP3O13555 125 aa2.55□□□□□ -2
WHI3YNL197C YKR104WP0CE69 306 aa2.55□□□□□ -2
WHI3YNL197C VPS21P36017 210 aaKnown RBP2.55□□□□□ -2
WHI3YNL197C TCD1P38756 429 aa2.55□□□□□ -2
WHI3YNL197C ECM11Q04110 302 aa2.55□□□□□ -2
WHI3YNL197C PEX10Q05568 337 aa2.55□□□□□ -2
WHI3YNL197C THP2O13539 261 aaKnown RBP2.54□□□□□ -2
WHI3YNL197C PBN1P25580 416 aa2.54□□□□□ -2
WHI3YNL197C VMA6P32366 345 aaKnown RBP2.54□□□□□ -2
WHI3YNL197C OST3P48439 350 aa2.54□□□□□ -2
WHI3YNL197C ZRG17P53735 605 aa2.54□□□□□ -2
WHI3YNL197C TVP15Q03860 143 aa2.54□□□□□ -2
WHI3YNL197C NNT1Q05874 261 aa2.54□□□□□ -2
WHI3YNL197C CCH1P50077 2039 aa2.54□□□□□ -2
WHI3YNL197C PPA2P28239 310 aa2.54□□□□□ -2
WHI3YNL197C RIB1P38066 345 aa2.54□□□□□ -2
WHI3YNL197C YHI9P38765 294 aa2.54□□□□□ -2
WHI3YNL197C YFR045WP43617 309 aa2.54□□□□□ -2
WHI3YNL197C SNZ2P53824 298 aa2.54□□□□□ -2
WHI3YNL197C SPG4Q04438 115 aa2.54□□□□□ -2
WHI3YNL197C ATG17Q06410 417 aa2.54□□□□□ -2
WHI3YNL197C TIM22Q12328 207 aa2.54□□□□□ -2
WHI3YNL197C YAK1P14680 807 aa2.53□□□□□ -2
WHI3YNL197C MRPL25P23369 157 aa2.53□□□□□ -2
WHI3YNL197C TOM40P23644 387 aaKnown RBP2.53□□□□□ -2
WHI3YNL197C NTF2P33331 125 aaKnown RBP2.53□□□□□ -2
WHI3YNL197C CAB3P36076 571 aa2.53□□□□□ -2
WHI3YNL197C TRM7P38238 310 aaKnown RBP2.53□□□□□ -2
WHI3YNL197C MIC12P38341 106 aa2.53□□□□□ -2
WHI3YNL197C YJR149WP47177 404 aa2.53□□□□□ -2
WHI3YNL197C MRH4P53166 561 aa2.53□□□□□ -2
WHI3YNL197C SLX9P53251 210 aaPredicted RBP2.53□□□□□ -2
WHI3YNL197C EMI1Q04406 187 aa2.53□□□□□ -2
WHI3YNL197C SEI1Q06058 285 aa2.53□□□□□ -2
WHI3YNL197C YDL012CQ12489 107 aa2.53□□□□□ -2
WHI3YNL197C PAN1P32521 1480 aa2.53□□□□□ -2
WHI3YNL197C RPL24BP24000 155 aaKnown RBP2.52□□□□□ -2.01
WHI3YNL197C DPB2P24482 689 aaPredicted RBP2.52□□□□□ -2.01
WHI3YNL197C PRY2P36110 329 aa2.52□□□□□ -2.01
WHI3YNL197C YOL019WQ08157 551 aa2.52□□□□□ -2.01
WHI3YNL197C RRS1Q08746 203 aaKnown RBP2.52□□□□□ -2.01
WHI3YNL197C PRR2Q12310 699 aa2.52□□□□□ -2.01
WHI3YNL197C SEY1Q99287 776 aa2.52□□□□□ -2.01
WHI3YNL197C YOL163WP0CF20 169 aa2.52□□□□□ -2.01
WHI3YNL197C MAL32P38158 584 aa2.52□□□□□ -2.01
WHI3YNL197C ECM13P38195 257 aa2.52□□□□□ -2.01
WHI3YNL197C FZO1P38297 855 aa2.52□□□□□ -2.01
WHI3YNL197C RPE1P46969 238 aa2.52□□□□□ -2.01
WHI3YNL197C MAL12P53341 584 aa2.52□□□□□ -2.01
WHI3YNL197C SNU23Q12368 194 aaPredicted RBP2.52□□□□□ -2.01
WHI3YNL197C NOT5Q12514 560 aaPredicted RBP2.52□□□□□ -2.01
WHI3YNL197C YPL247CQ12523 523 aa2.52□□□□□ -2.01
WHI3YNL197C YKL183C-AQ3E765 70 aa2.52□□□□□ -2.01
WHI3YNL197C CDC36P06100 191 aaPredicted RBP2.51□□□□□ -2.01
WHI3YNL197C ZWF1P11412 505 aaKnown RBP2.51□□□□□ -2.01
WHI3YNL197C YMR31P19955 123 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms