RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W UFD1P53044 361 aa0.09□□□□□ -2.4
PRP39YML046W LST7P53237 242 aa0.09□□□□□ -2.4
PRP39YML046W ACT1P60010 375 aaKnown RBP0.09□□□□□ -2.4
PRP39YML046W ABZ2Q03266 374 aa0.09□□□□□ -2.4
PRP39YML046W PEX12Q04370 399 aa0.09□□□□□ -2.4
PRP39YML046W ERB1Q04660 807 aaKnown RBP0.09□□□□□ -2.4
PRP39YML046W NAT4Q04751 285 aa0.09□□□□□ -2.4
PRP39YML046W ARC18Q05933 178 aaKnown RBP0.09□□□□□ -2.4
PRP39YML046W REX3Q12090 404 aa0.09□□□□□ -2.4
PRP39YML046W YPL150WQ12152 901 aa0.09□□□□□ -2.4
PRP39YML046W SLH1P53327 1967 aaKnown RBP0.09□□□□□ -2.4
PRP39YML046W PXA2P34230 853 aa0.08□□□□□ -2.4
PRP39YML046W TVP38P36164 337 aa0.08□□□□□ -2.4
PRP39YML046W TRM7P38238 310 aaKnown RBP0.08□□□□□ -2.4
PRP39YML046W YIR020CP40575 100 aa0.08□□□□□ -2.4
PRP39YML046W CDC40P40968 455 aaPredicted RBP0.08□□□□□ -2.4
PRP39YML046W ZIM17P42844 174 aa0.08□□□□□ -2.4
PRP39YML046W MZM1Q03429 123 aaPredicted RBP0.08□□□□□ -2.4
PRP39YML046W SMP3Q04174 516 aa0.08□□□□□ -2.4
PRP39YML046W NDL1Q06568 189 aa0.08□□□□□ -2.4
PRP39YML046W MLP1Q02455 1875 aaKnown RBP0.08□□□□□ -2.4
PRP39YML046W CYR1P08678 2026 aaKnown RBP0.08□□□□□ -2.4
PRP39YML046W FUR1P18562 216 aaKnown RBP0.07□□□□□ -2.4
PRP39YML046W ROX3P25046 220 aa0.07□□□□□ -2.4
PRP39YML046W SFC1P33303 322 aa0.07□□□□□ -2.4
PRP39YML046W MYO3P36006 1272 aa0.07□□□□□ -2.4
PRP39YML046W TPO5P36029 618 aa0.07□□□□□ -2.4
PRP39YML046W YBR062CP38239 180 aa0.07□□□□□ -2.4
PRP39YML046W YHR177WP38867 453 aa0.07□□□□□ -2.4
PRP39YML046W SER33P40510 469 aa0.07□□□□□ -2.4
PRP39YML046W CUP9P41817 306 aa0.07□□□□□ -2.4
PRP39YML046W YFL064CP43540 174 aa0.07□□□□□ -2.4
PRP39YML046W TPC1P53257 314 aa0.07□□□□□ -2.4
PRP39YML046W YNR068CP53754 272 aa0.07□□□□□ -2.4
PRP39YML046W HCH1P53834 153 aa0.07□□□□□ -2.4
PRP39YML046W YNL050CP53952 270 aa0.07□□□□□ -2.4
PRP39YML046W MEH1Q02205 184 aa0.07□□□□□ -2.4
PRP39YML046W IPK1Q06667 281 aa0.07□□□□□ -2.4
PRP39YML046W YPR202WQ08993 238 aa0.07□□□□□ -2.4
PRP39YML046W MDM32Q12171 622 aa0.07□□□□□ -2.4
PRP39YML046W SUR1P33300 382 aa0.07□□□□□ -2.4
PRP39YML046W AIM29P36154 155 aa0.07□□□□□ -2.4
PRP39YML046W ARN2P38724 620 aa0.07□□□□□ -2.4
PRP39YML046W SNL1P40548 159 aa0.07□□□□□ -2.4
PRP39YML046W TCB2P48231 1178 aa0.07□□□□□ -2.4
PRP39YML046W COS6P53344 381 aa0.07□□□□□ -2.4
PRP39YML046W MNT4P53745 580 aa0.07□□□□□ -2.4
PRP39YML046W PDR16P53860 351 aaKnown RBP0.07□□□□□ -2.4
PRP39YML046W YLR446WQ06204 433 aa0.07□□□□□ -2.4
PRP39YML046W DTD1Q07648 150 aaKnown RBP0.07□□□□□ -2.4
PRP39YML046W APC5Q08683 685 aa0.07□□□□□ -2.4
PRP39YML046W YPL245WQ12179 454 aaKnown RBP0.07□□□□□ -2.4
PRP39YML046W SMC6Q12749 1114 aa0.07□□□□□ -2.4
PRP39YML046W SRN2Q99176 213 aa0.07□□□□□ -2.4
PRP39YML046W ZWF1P11412 505 aaKnown RBP0.06□□□□□ -2.4
PRP39YML046W ERG9P29704 444 aa0.06□□□□□ -2.4
PRP39YML046W SGE1P33335 543 aa0.06□□□□□ -2.4
PRP39YML046W YHR035WP38769 630 aa0.06□□□□□ -2.4
PRP39YML046W AVT7P40501 490 aa0.06□□□□□ -2.4
PRP39YML046W YIL086CP40503 102 aa0.06□□□□□ -2.4
PRP39YML046W YNL247WP53852 767 aaKnown RBP0.06□□□□□ -2.4
PRP39YML046W YDL144CQ07589 356 aa0.06□□□□□ -2.4
PRP39YML046W LCL2Q08045 131 aa0.06□□□□□ -2.4
PRP39YML046W PEX27Q08580 376 aa0.06□□□□□ -2.4
PRP39YML046W UAF30Q08747 228 aa0.06□□□□□ -2.4
PRP39YML046W VIK1Q12045 647 aa0.06□□□□□ -2.4
PRP39YML046W RPN6Q12377 434 aa0.06□□□□□ -2.4
PRP39YML046W YPL247CQ12523 523 aa0.06□□□□□ -2.4
PRP39YML046W YOR032W-AQ8TGS1 66 aa0.06□□□□□ -2.4
PRP39YML046W RAD50P12753 1312 aa0.06□□□□□ -2.4
PRP39YML046W UBR1P19812 1950 aa0.06□□□□□ -2.4
PRP39YML046W LTV1P34078 463 aa0.05□□□□□ -2.4
PRP39YML046W YOR062CP36025 268 aa0.05□□□□□ -2.4
PRP39YML046W YKR045CP36138 183 aa0.05□□□□□ -2.4
PRP39YML046W MMS21P38632 267 aa0.05□□□□□ -2.4
PRP39YML046W YHL037CP38733 133 aa0.05□□□□□ -2.4
PRP39YML046W SEN34P39707 275 aa0.05□□□□□ -2.4
PRP39YML046W NDE1P40215 560 aa0.05□□□□□ -2.4
PRP39YML046W YGR017WP53210 297 aa0.05□□□□□ -2.4
PRP39YML046W RET3P53600 189 aa0.05□□□□□ -2.4
PRP39YML046W SED1Q01589 338 aa0.05□□□□□ -2.4
PRP39YML046W OSH6Q02201 448 aa0.05□□□□□ -2.4
PRP39YML046W NNT1Q05874 261 aa0.05□□□□□ -2.4
PRP39YML046W CSI2Q08054 341 aa0.05□□□□□ -2.4
PRP39YML046W RTR2Q12378 196 aa0.05□□□□□ -2.4
PRP39YML046W YDR010CQ12426 110 aa0.05□□□□□ -2.4
PRP39YML046W RAD10P06838 210 aa0.05□□□□□ -2.4
PRP39YML046W GAL3P13045 520 aa0.05□□□□□ -2.4
PRP39YML046W DPM1P14020 267 aaKnown RBP0.05□□□□□ -2.4
PRP39YML046W MDH1P17505 334 aaKnown RBP RIP-Chip data0.05□□□□□ -2.4not detected
PRP39YML046W DBR1P24309 405 aaKnown RBP0.05□□□□□ -2.4
PRP39YML046W MRPL6P32904 214 aa0.05□□□□□ -2.4
PRP39YML046W LSM5P40089 93 aaKnown RBP0.05□□□□□ -2.4
PRP39YML046W SHQ1P40486 507 aaPredicted RBP0.05□□□□□ -2.4
PRP39YML046W ADO1P47143 340 aaKnown RBP0.05□□□□□ -2.4
PRP39YML046W KEL2P50090 882 aa0.05□□□□□ -2.4
PRP39YML046W PRO2P54885 456 aaKnown RBP0.05□□□□□ -2.4
PRP39YML046W CSM3Q04659 317 aa0.05□□□□□ -2.4
PRP39YML046W MIM1Q08176 113 aa0.05□□□□□ -2.4
PRP39YML046W FSH3Q99369 266 aa0.05□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms