RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C APA2P22108 325 aa1.8□□□□□ -2.12
ATG38YLR211C YCR025CP25352 136 aa1.8□□□□□ -2.12
ATG38YLR211C PBN1P25580 416 aa1.8□□□□□ -2.12
ATG38YLR211C MCH2P36032 473 aa1.8□□□□□ -2.12
ATG38YLR211C CBT1P36038 271 aaPredicted RBP1.8□□□□□ -2.12
ATG38YLR211C AIM29P36154 155 aa1.8□□□□□ -2.12
ATG38YLR211C PRS2P38620 318 aaKnown RBP1.8□□□□□ -2.12
ATG38YLR211C YHL044WP38727 235 aa1.8□□□□□ -2.12
ATG38YLR211C RPL10P41805 221 aaKnown RBP1.8□□□□□ -2.12
ATG38YLR211C MNN5P46982 586 aa1.8□□□□□ -2.12
ATG38YLR211C UBC13P52490 153 aa1.8□□□□□ -2.12
ATG38YLR211C MRPS17Q03246 237 aaPredicted RBP1.8□□□□□ -2.12
ATG38YLR211C BNA7Q04066 261 aa1.8□□□□□ -2.12
ATG38YLR211C CTR3Q06686 241 aa1.8□□□□□ -2.12
ATG38YLR211C YPR064WQ12492 139 aa1.8□□□□□ -2.12
ATG38YLR211C RPP0P05317 312 aaKnown RBP1.79□□□□□ -2.12
ATG38YLR211C CDC33P07260 213 aaKnown RBP1.79□□□□□ -2.12
ATG38YLR211C RPL24BP24000 155 aaKnown RBP1.79□□□□□ -2.12
ATG38YLR211C RIB1P38066 345 aa1.79□□□□□ -2.12
ATG38YLR211C DDI1P40087 428 aa1.79□□□□□ -2.12
ATG38YLR211C PIR5P46999 287 aa1.79□□□□□ -2.12
ATG38YLR211C GLG2P47011 380 aa1.79□□□□□ -2.12
ATG38YLR211C YJR012CP47087 207 aa1.79□□□□□ -2.12
ATG38YLR211C EBS1Q03466 884 aaKnown RBP1.79□□□□□ -2.12
ATG38YLR211C DPP1Q05521 289 aa1.79□□□□□ -2.12
ATG38YLR211C DCR2Q05924 578 aa1.79□□□□□ -2.12
ATG38YLR211C SPO77Q06134 477 aa1.79□□□□□ -2.12
ATG38YLR211C SFH1Q06168 426 aa1.79□□□□□ -2.12
ATG38YLR211C PER33Q12144 273 aa1.79□□□□□ -2.12
ATG38YLR211C YOS9Q99220 542 aa1.79□□□□□ -2.12
ATG38YLR211C MATALPHA2P0CY08 210 aa1.78□□□□□ -2.12
ATG38YLR211C HMLALPHA2P0CY09 210 aa1.78□□□□□ -2.12
ATG38YLR211C CBF1P17106 351 aa1.78□□□□□ -2.12
ATG38YLR211C OSM1P21375 501 aaKnown RBP1.78□□□□□ -2.12
ATG38YLR211C VPH2P32341 215 aa1.78□□□□□ -2.12
ATG38YLR211C QRI5P32344 111 aa1.78□□□□□ -2.12
ATG38YLR211C PRP18P33411 251 aaPredicted RBP1.78□□□□□ -2.12
ATG38YLR211C RTC3P38804 111 aaPredicted RBP1.78□□□□□ -2.12
ATG38YLR211C YNL194CP40169 301 aa1.78□□□□□ -2.12
ATG38YLR211C HOC1P47124 396 aa1.78□□□□□ -2.12
ATG38YLR211C MAL13P53338 473 aa1.78□□□□□ -2.12
ATG38YLR211C SNZ1Q03148 297 aa1.78□□□□□ -2.12
ATG38YLR211C YLR446WQ06204 433 aa1.78□□□□□ -2.12
ATG38YLR211C GET4Q12125 312 aa1.78□□□□□ -2.12
ATG38YLR211C YRA1Q12159 226 aaKnown RBP1.78□□□□□ -2.12
ATG38YLR211C YOR114WQ12219 294 aa1.78□□□□□ -2.12
ATG38YLR211C RAD9P14737 1309 aa1.77□□□□□ -2.13
ATG38YLR211C RPS3P05750 240 aaKnown RBP1.77□□□□□ -2.13
ATG38YLR211C POX1P13711 748 aa1.77□□□□□ -2.13
ATG38YLR211C STE18P18852 110 aa1.77□□□□□ -2.13
ATG38YLR211C YPK2P18961 677 aa1.77□□□□□ -2.13
ATG38YLR211C YMR31P19955 123 aa1.77□□□□□ -2.13
ATG38YLR211C RPO26P20435 155 aa1.77□□□□□ -2.13
ATG38YLR211C RNA15P25299 296 aaPredicted RBP1.77□□□□□ -2.13
ATG38YLR211C VMA6P32366 345 aaKnown RBP1.77□□□□□ -2.13
ATG38YLR211C MRX3P38172 270 aa1.77□□□□□ -2.13
ATG38YLR211C NPT1P39683 429 aaKnown RBP1.77□□□□□ -2.13
ATG38YLR211C SMB1P40018 196 aaKnown RBP1.77□□□□□ -2.13
ATG38YLR211C ERG28P40030 148 aa1.77□□□□□ -2.13
ATG38YLR211C THO1P40040 218 aaKnown RBP1.77□□□□□ -2.13
ATG38YLR211C YRB2P40517 327 aa1.77□□□□□ -2.13
ATG38YLR211C SYS1P41544 203 aa1.77□□□□□ -2.13
ATG38YLR211C JHD2P47156 728 aaPredicted RBP1.77□□□□□ -2.13
ATG38YLR211C YPT32P51996 222 aaKnown RBP1.77□□□□□ -2.13
ATG38YLR211C TPN1P53099 579 aa1.77□□□□□ -2.13
ATG38YLR211C SYF2P53277 215 aaPredicted RBP1.77□□□□□ -2.13
ATG38YLR211C SSU72P53538 206 aaPredicted RBP1.77□□□□□ -2.13
ATG38YLR211C CTF19Q02732 369 aa1.77□□□□□ -2.13
ATG38YLR211C KRE28Q04431 385 aa1.77□□□□□ -2.13
ATG38YLR211C PRR2Q12310 699 aa1.77□□□□□ -2.13
ATG38YLR211C TIM22Q12328 207 aa1.77□□□□□ -2.13
ATG38YLR211C YPL119C-AQ3E751 87 aa1.77□□□□□ -2.13
ATG38YLR211C LAG2Q92325 660 aa1.77□□□□□ -2.13
ATG38YLR211C JIP3O13555 125 aa1.76□□□□□ -2.13
ATG38YLR211C PET494P07390 489 aaPredicted RBP1.76□□□□□ -2.13
ATG38YLR211C VPS21P36017 210 aaKnown RBP1.76□□□□□ -2.13
ATG38YLR211C JEN1P36035 616 aa1.76□□□□□ -2.13
ATG38YLR211C URA8P38627 578 aaPredicted RBP1.76□□□□□ -2.13
ATG38YLR211C VAB2P40003 282 aa1.76□□□□□ -2.13
ATG38YLR211C RFC4P40339 323 aaKnown RBP1.76□□□□□ -2.13
ATG38YLR211C SER33P40510 469 aa1.76□□□□□ -2.13
ATG38YLR211C RPC17P47076 161 aa1.76□□□□□ -2.13
ATG38YLR211C HAM1P47119 197 aaKnown RBP1.76□□□□□ -2.13
ATG38YLR211C IBA57P47158 497 aa1.76□□□□□ -2.13
ATG38YLR211C CUS2P53830 285 aaPredicted RBP1.76□□□□□ -2.13
ATG38YLR211C ASI3P53983 676 aa1.76□□□□□ -2.13
ATG38YLR211C TAF9Q05027 157 aa1.76□□□□□ -2.13
ATG38YLR211C SMD2Q06217 110 aaKnown RBP1.76□□□□□ -2.13
ATG38YLR211C VIK1Q12045 647 aa1.76□□□□□ -2.13
ATG38YLR211C YKL183C-AQ3E765 70 aa1.76□□□□□ -2.13
ATG38YLR211C SEY1Q99287 776 aa1.76□□□□□ -2.13
ATG38YLR211C YDR157WA0A023PZE8 133 aa1.75□□□□□ -2.13
ATG38YLR211C YBR121C-AP0C5L4 52 aa1.75□□□□□ -2.13
ATG38YLR211C HOM6P31116 359 aaKnown RBP1.75□□□□□ -2.13
ATG38YLR211C CDC13P32797 924 aaKnown RBP1.75□□□□□ -2.13
ATG38YLR211C YBR096WP38256 230 aa1.75□□□□□ -2.13
ATG38YLR211C AVT7P40501 490 aa1.75□□□□□ -2.13
ATG38YLR211C YJR079WP47126 109 aa1.75□□□□□ -2.13
ATG38YLR211C CWC23P52868 283 aaPredicted RBP1.75□□□□□ -2.13
ATG38YLR211C USE1P53146 245 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms