RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C SAM35P14693 329 aa3.06□□□□□ -1.92
VPS53YJL029C DBF2P22204 572 aa3.06□□□□□ -1.92
VPS53YJL029C SED4P25365 1065 aa3.06□□□□□ -1.92
VPS53YJL029C TCA17P32613 152 aa3.06□□□□□ -1.92
VPS53YJL029C ARC40P38328 384 aaKnown RBP3.06□□□□□ -1.92
VPS53YJL029C YIL012WP40551 113 aa3.06□□□□□ -1.92
VPS53YJL029C MTL1P53214 551 aa3.06□□□□□ -1.92
VPS53YJL029C BUD17P53727 317 aa3.06□□□□□ -1.92
VPS53YJL029C SED1Q01589 338 aa3.06□□□□□ -1.92
VPS53YJL029C LRS4Q04087 347 aaKnown RBP3.06□□□□□ -1.92
VPS53YJL029C YMR315WQ04869 349 aaKnown RBP3.06□□□□□ -1.92
VPS53YJL029C YPR098CQ06089 161 aa3.06□□□□□ -1.92
VPS53YJL029C RRP9Q06506 573 aaKnown RBP3.06□□□□□ -1.92
VPS53YJL029C AIM6Q07716 390 aa3.06□□□□□ -1.92
VPS53YJL029C RFU1Q08003 200 aa3.06□□□□□ -1.92
VPS53YJL029C TY1A-NL1Q12391 440 aaKnown RBP3.06□□□□□ -1.92
VPS53YJL029C TDH3P00359 332 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
VPS53YJL029C NFT1P0CE68 1218 aa3.05□□□□□ -1.92
VPS53YJL029C DSF1P0CX08 502 aa3.05□□□□□ -1.92
VPS53YJL029C YNR073CP0CX09 502 aa3.05□□□□□ -1.92
VPS53YJL029C VPS17P32913 551 aa3.05□□□□□ -1.92
VPS53YJL029C SHM2P37291 469 aaKnown RBP3.05□□□□□ -1.92
VPS53YJL029C YBR138CP38277 524 aa3.05□□□□□ -1.92
VPS53YJL029C RTC2P38279 296 aa3.05□□□□□ -1.92
VPS53YJL029C IPT1P38954 527 aa3.05□□□□□ -1.92
VPS53YJL029C MSS4P38994 779 aa3.05□□□□□ -1.92
VPS53YJL029C YIL029CP40538 142 aa3.05□□□□□ -1.92
VPS53YJL029C NAS2P40555 220 aa3.05□□□□□ -1.92
VPS53YJL029C SWP82P43554 623 aa3.05□□□□□ -1.92
VPS53YJL029C YNR048WP53740 393 aa3.05□□□□□ -1.92
VPS53YJL029C PRM15Q03262 622 aa3.05□□□□□ -1.92
VPS53YJL029C MRX8Q05473 314 aa3.05□□□□□ -1.92
VPS53YJL029C YLR345WQ06137 509 aa3.05□□□□□ -1.92
VPS53YJL029C MED2Q12124 431 aa3.05□□□□□ -1.92
VPS53YJL029C TRM10Q12400 293 aa3.05□□□□□ -1.92
VPS53YJL029C HXT2P23585 541 aa3.05□□□□□ -1.92
VPS53YJL029C DEG1P31115 442 aaKnown RBP3.05□□□□□ -1.92
VPS53YJL029C NNK1P36003 928 aa3.05□□□□□ -1.92
VPS53YJL029C ARO9P38840 513 aaPredicted RBP3.05□□□□□ -1.92
VPS53YJL029C YIR020CP40575 100 aa3.05□□□□□ -1.92
VPS53YJL029C CIN2P46670 268 aa3.05□□□□□ -1.92
VPS53YJL029C UBC13P52490 153 aa3.05□□□□□ -1.92
VPS53YJL029C PEF1P53238 335 aa3.05□□□□□ -1.92
VPS53YJL029C DLT1Q04216 342 aa3.05□□□□□ -1.92
VPS53YJL029C YMR087WQ04299 284 aa3.05□□□□□ -1.92
VPS53YJL029C GAL83Q04739 417 aa3.05□□□□□ -1.92
VPS53YJL029C YTH1Q06102 208 aaPredicted RBP3.05□□□□□ -1.92
VPS53YJL029C TSR2Q06672 205 aaKnown RBP3.05□□□□□ -1.92
VPS53YJL029C GAT3Q07928 141 aa3.05□□□□□ -1.92
VPS53YJL029C FRE6Q12473 712 aa3.05□□□□□ -1.92
VPS53YJL029C KRR1P25586 316 aaPredicted RBP3.04□□□□□ -1.92
VPS53YJL029C REC114P32841 428 aa3.04□□□□□ -1.92
VPS53YJL029C SLM4P38247 162 aa3.04□□□□□ -1.92
VPS53YJL029C MDM31P38880 579 aa3.04□□□□□ -1.92
VPS53YJL029C QRI7P43122 407 aa3.04□□□□□ -1.92
VPS53YJL029C SLD3P53135 668 aa3.04□□□□□ -1.92
VPS53YJL029C CIK1Q01649 594 aa3.04□□□□□ -1.92
VPS53YJL029C YMR279CQ03263 540 aa3.04□□□□□ -1.92
VPS53YJL029C RSC58Q07979 502 aa3.04□□□□□ -1.92
VPS53YJL029C MED11Q99278 115 aa3.04□□□□□ -1.92
VPS53YJL029C TDH2P00358 332 aaKnown RBP3.04□□□□□ -1.92
VPS53YJL029C SOD2P00447 233 aa3.04□□□□□ -1.92
VPS53YJL029C MEK1P24719 497 aaPredicted RBP3.04□□□□□ -1.92
VPS53YJL029C YBR063CP38083 404 aa3.04□□□□□ -1.92
VPS53YJL029C YBR285WP38354 144 aa3.04□□□□□ -1.92
VPS53YJL029C SGN1P40561 250 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
VPS53YJL029C IRC24P40580 263 aa3.04□□□□□ -1.92
VPS53YJL029C EGT2P42835 1041 aa3.04□□□□□ -1.92
VPS53YJL029C PMT6P42934 759 aa3.04□□□□□ -1.92
VPS53YJL029C NCA3P46955 337 aa3.04□□□□□ -1.92
VPS53YJL029C YGL204CP53089 101 aa3.04□□□□□ -1.92
VPS53YJL029C NRK1P53915 240 aa3.04□□□□□ -1.92
VPS53YJL029C YLR152CP54072 576 aa3.04□□□□□ -1.92
VPS53YJL029C BRE4Q07660 1125 aa3.04□□□□□ -1.92
VPS53YJL029C TMC1Q08422 150 aaPredicted RBP3.04□□□□□ -1.92
VPS53YJL029C ISA2Q12425 185 aa3.04□□□□□ -1.92
VPS53YJL029C RPS13P05756 151 aaKnown RBP3.03□□□□□ -1.92
VPS53YJL029C PDE2P06776 526 aa3.03□□□□□ -1.92
VPS53YJL029C MDH1P17505 334 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
VPS53YJL029C PUB1P32588 453 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
VPS53YJL029C GLC7P32598 312 aaKnown RBP3.03□□□□□ -1.92
VPS53YJL029C YKR015CP36111 568 aa3.03□□□□□ -1.92
VPS53YJL029C YHR035WP38769 630 aa3.03□□□□□ -1.92
VPS53YJL029C ECM14P38836 430 aa3.03□□□□□ -1.92
VPS53YJL029C YER121WP40076 114 aa3.03□□□□□ -1.92
VPS53YJL029C YRB2P40517 327 aa3.03□□□□□ -1.92
VPS53YJL029C CTK2P46962 323 aa3.03□□□□□ -1.92
VPS53YJL029C MOT3P54785 490 aaKnown RBP3.03□□□□□ -1.92
VPS53YJL029C TLG1Q03322 224 aa3.03□□□□□ -1.92
VPS53YJL029C RCF1Q03713 159 aa3.03□□□□□ -1.92
VPS53YJL029C GPI17Q04080 534 aa3.03□□□□□ -1.92
VPS53YJL029C YDR514CQ04408 483 aa3.03□□□□□ -1.92
VPS53YJL029C RDL1Q12305 139 aaKnown RBP3.03□□□□□ -1.92
VPS53YJL029C MES1P00958 751 aaKnown RBP3.03□□□□□ -1.92
VPS53YJL029C MSI1P13712 422 aa3.03□□□□□ -1.92
VPS53YJL029C BOS1P25385 244 aa3.03□□□□□ -1.92
VPS53YJL029C RPB9P27999 122 aa3.03□□□□□ -1.92
VPS53YJL029C ZUO1P32527 433 aaKnown RBP3.03□□□□□ -1.92
VPS53YJL029C RPC34P32910 317 aa3.03□□□□□ -1.92
VPS53YJL029C YOX1P34161 385 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms