RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W NIF3P53081 288 aa1.92□□□□□ -2.1
SHS1YDL225W EBS1Q03466 884 aaKnown RBP1.92□□□□□ -2.1
SHS1YDL225W FCF1Q05498 189 aaPredicted RBP1.92□□□□□ -2.1
SHS1YDL225W MSF1P08425 469 aa1.91□□□□□ -2.1
SHS1YDL225W RRT12P25381 491 aa1.91□□□□□ -2.1
SHS1YDL225W YUH1P35127 236 aa1.91□□□□□ -2.1
SHS1YDL225W SLX9P53251 210 aaPredicted RBP1.91□□□□□ -2.1
SHS1YDL225W AAH1P53909 347 aa1.91□□□□□ -2.1
SHS1YDL225W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
SHS1YDL225W BTS1Q12051 335 aa1.91□□□□□ -2.1
SHS1YDL225W SMT3Q12306 101 aaKnown RBP1.91□□□□□ -2.1
SHS1YDL225W AGC1Q12482 902 aa1.91□□□□□ -2.1
SHS1YDL225W BMH1P29311 267 aaKnown RBP1.9□□□□□ -2.1
SHS1YDL225W QRI5P32344 111 aa1.9□□□□□ -2.1
SHS1YDL225W UTR5P32630 166 aa1.9□□□□□ -2.1
SHS1YDL225W RPT5P33297 434 aaKnown RBP1.9□□□□□ -2.1
SHS1YDL225W COY1P34237 679 aa1.9□□□□□ -2.1
SHS1YDL225W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.9□□□□□ -2.1not detected
SHS1YDL225W DSN1P40568 576 aa1.9□□□□□ -2.1
SHS1YDL225W SYF2P53277 215 aaPredicted RBP1.9□□□□□ -2.1
SHS1YDL225W ADH6Q04894 360 aaKnown RBP1.9□□□□□ -2.1
SHS1YDL225W PEX10Q05568 337 aa1.9□□□□□ -2.1
SHS1YDL225W RRT8Q08219 342 aa1.9□□□□□ -2.1
SHS1YDL225W YPL119C-AQ3E751 87 aa1.9□□□□□ -2.1
SHS1YDL225W VPS3P23643 1011 aa1.9□□□□□ -2.11
SHS1YDL225W PRS2P38620 318 aaKnown RBP1.9□□□□□ -2.11
SHS1YDL225W TEM1P38987 245 aa1.9□□□□□ -2.11
SHS1YDL225W AGX1P43567 385 aa1.9□□□□□ -2.11
SHS1YDL225W YJL028WP47062 111 aa1.9□□□□□ -2.11
SHS1YDL225W SSU72P53538 206 aaPredicted RBP1.9□□□□□ -2.11
SHS1YDL225W MIX17Q03667 156 aa1.9□□□□□ -2.11
SHS1YDL225W CTS2Q06350 511 aa1.9□□□□□ -2.11
SHS1YDL225W PLB3Q08108 686 aa1.9□□□□□ -2.11
SHS1YDL225W YOL107WQ12239 342 aa1.9□□□□□ -2.11
SHS1YDL225W NOT5Q12514 560 aaPredicted RBP1.9□□□□□ -2.11
SHS1YDL225W INO80P53115 1489 aa1.89□□□□□ -2.11
SHS1YDL225W RAD10P06838 210 aa1.89□□□□□ -2.11
SHS1YDL225W POX1P13711 748 aa1.89□□□□□ -2.11
SHS1YDL225W RSR1P13856 272 aa1.89□□□□□ -2.11
SHS1YDL225W SFC1P33303 322 aa1.89□□□□□ -2.11
SHS1YDL225W IGO1P53897 168 aa1.89□□□□□ -2.11
SHS1YDL225W RAD3P06839 778 aa1.88□□□□□ -2.11
SHS1YDL225W DPB2P24482 689 aaPredicted RBP1.88□□□□□ -2.11
SHS1YDL225W CWP1P28319 239 aa1.88□□□□□ -2.11
SHS1YDL225W BIG1P38813 335 aa1.88□□□□□ -2.11
SHS1YDL225W SPT8P38915 602 aa1.88□□□□□ -2.11
SHS1YDL225W SMB1P40018 196 aaKnown RBP1.88□□□□□ -2.11
SHS1YDL225W YJR141WP47172 347 aaPredicted RBP1.88□□□□□ -2.11
SHS1YDL225W BOP2Q06150 570 aa1.88□□□□□ -2.11
SHS1YDL225W YPL247CQ12523 523 aa1.88□□□□□ -2.11
SHS1YDL225W GDH2P33327 1092 aaKnown RBP1.87□□□□□ -2.11
SHS1YDL225W JEN1P36035 616 aa1.87□□□□□ -2.11
SHS1YDL225W PRS4P38063 326 aaPredicted RBP1.87□□□□□ -2.11
SHS1YDL225W MAL32P38158 584 aa1.87□□□□□ -2.11
SHS1YDL225W YHR045WP38775 560 aa1.87□□□□□ -2.11
SHS1YDL225W MED6P38782 295 aa1.87□□□□□ -2.11
SHS1YDL225W MDM34P53083 459 aa1.87□□□□□ -2.11
SHS1YDL225W MAL12P53341 584 aa1.87□□□□□ -2.11
SHS1YDL225W EMI1Q04406 187 aa1.87□□□□□ -2.11
SHS1YDL225W GRH1Q04410 372 aaKnown RBP1.87□□□□□ -2.11
SHS1YDL225W SDO1Q07953 250 aaKnown RBP1.87□□□□□ -2.11
SHS1YDL225W YOR268CQ08734 132 aa1.87□□□□□ -2.11
SHS1YDL225W PST1Q12355 444 aa1.87□□□□□ -2.11
SHS1YDL225W SNF8Q12483 233 aa1.87□□□□□ -2.11
SHS1YDL225W RNP1P32385 249 aa1.86□□□□□ -2.11
SHS1YDL225W MRX3P38172 270 aa1.86□□□□□ -2.11
SHS1YDL225W GLG2P47011 380 aa1.86□□□□□ -2.11
SHS1YDL225W YDR209CQ03480 137 aa1.86□□□□□ -2.11
SHS1YDL225W RDS3Q06835 107 aaPredicted RBP1.86□□□□□ -2.11
SHS1YDL225W SLD7Q08457 257 aa1.86□□□□□ -2.11
SHS1YDL225W YPR011CQ12251 326 aa1.86□□□□□ -2.11
SHS1YDL225W GEP5Q12393 293 aa1.86□□□□□ -2.11
SHS1YDL225W YBL008W-AQ3E821 79 aa1.86□□□□□ -2.11
SHS1YDL225W DPM1P14020 267 aaKnown RBP1.86□□□□□ -2.11
SHS1YDL225W GON7P46984 123 aa1.86□□□□□ -2.11
SHS1YDL225W YMR114CQ04471 368 aaKnown RBP1.86□□□□□ -2.11
SHS1YDL225W YOR029WQ12243 111 aa1.86□□□□□ -2.11
SHS1YDL225W PPH21P23594 369 aa1.85□□□□□ -2.11
SHS1YDL225W EHD3P28817 500 aa1.85□□□□□ -2.11
SHS1YDL225W HOM6P31116 359 aaKnown RBP1.85□□□□□ -2.11
SHS1YDL225W ECM13P38195 257 aa1.85□□□□□ -2.11
SHS1YDL225W SNZ3P43545 298 aa1.85□□□□□ -2.11
SHS1YDL225W YNL134CP53912 376 aaKnown RBP1.85□□□□□ -2.11
SHS1YDL225W ASI3P53983 676 aa1.85□□□□□ -2.11
SHS1YDL225W COQ10Q08058 207 aa1.85□□□□□ -2.11
SHS1YDL225W BNA6P43619 295 aa1.84□□□□□ -2.11
SHS1YDL225W YGL034CP53186 121 aa1.84□□□□□ -2.11
SHS1YDL225W CTF19Q02732 369 aa1.84□□□□□ -2.11
SHS1YDL225W MYO5Q04439 1219 aaKnown RBP1.84□□□□□ -2.11
SHS1YDL225W YLR173WQ06247 608 aa1.84□□□□□ -2.11
SHS1YDL225W ATG17Q06410 417 aa1.84□□□□□ -2.11
SHS1YDL225W YPR147CQ06522 304 aaKnown RBP1.84□□□□□ -2.11
SHS1YDL225W CDD1Q06549 142 aa1.84□□□□□ -2.11
SHS1YDL225W RPL26AP05743 127 aaKnown RBP1.83□□□□□ -2.12
SHS1YDL225W RNA15P25299 296 aaPredicted RBP1.83□□□□□ -2.12
SHS1YDL225W YBR096WP38256 230 aa1.83□□□□□ -2.12
SHS1YDL225W RPL26BP53221 127 aaKnown RBP1.83□□□□□ -2.12
SHS1YDL225W RRN5Q02983 363 aa1.83□□□□□ -2.12
SHS1YDL225W YPR098CQ06089 161 aa1.83□□□□□ -2.12
SHS1YDL225W SUE1Q06524 206 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms