RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C DPB2P24482 689 aaPredicted RBP1.79□□□□□ -2.12
PBP4YDL053C SFC1P33303 322 aa1.79□□□□□ -2.12
PBP4YDL053C YGP1P38616 354 aaKnown RBP1.79□□□□□ -2.12
PBP4YDL053C GON7P46984 123 aa1.79□□□□□ -2.12
PBP4YDL053C RPL4BP49626 362 aaKnown RBP1.79□□□□□ -2.12
PBP4YDL053C NBP35P52920 328 aa1.79□□□□□ -2.12
PBP4YDL053C NIF3P53081 288 aa1.79□□□□□ -2.12
PBP4YDL053C SWS2P53937 143 aa1.79□□□□□ -2.12
PBP4YDL053C RRN5Q02983 363 aa1.79□□□□□ -2.12
PBP4YDL053C ATC1Q04005 294 aa1.79□□□□□ -2.12
PBP4YDL053C YMR114CQ04471 368 aaKnown RBP1.79□□□□□ -2.12
PBP4YDL053C SPO77Q06134 477 aa1.79□□□□□ -2.12
PBP4YDL053C GDH2P33327 1092 aaKnown RBP1.78□□□□□ -2.12
PBP4YDL053C HEK2P38199 381 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
PBP4YDL053C HSM3P38348 480 aa1.78□□□□□ -2.12
PBP4YDL053C YHL049CP38722 271 aa1.78□□□□□ -2.12
PBP4YDL053C YHR045WP38775 560 aa1.78□□□□□ -2.12
PBP4YDL053C SHC1P39000 512 aa1.78□□□□□ -2.12
PBP4YDL053C YJL028WP47062 111 aa1.78□□□□□ -2.12
PBP4YDL053C TIM21P53220 239 aa1.78□□□□□ -2.12
PBP4YDL053C CAB4P53332 305 aa1.78□□□□□ -2.12
PBP4YDL053C MNT4P53745 580 aa1.78□□□□□ -2.12
PBP4YDL053C CGI121Q03705 181 aaKnown RBP1.78□□□□□ -2.12
PBP4YDL053C TY3A-GQ12173 290 aa1.78□□□□□ -2.12
PBP4YDL053C SMT3Q12306 101 aaKnown RBP1.78□□□□□ -2.12
PBP4YDL053C TY3A-IQ99219 290 aa1.78□□□□□ -2.12
PBP4YDL053C STH1P32597 1359 aa1.77□□□□□ -2.13
PBP4YDL053C SSA3P09435 649 aaKnown RBP1.77□□□□□ -2.13
PBP4YDL053C MET16P18408 261 aaPredicted RBP1.77□□□□□ -2.13
PBP4YDL053C PPH21P23594 369 aa1.77□□□□□ -2.13
PBP4YDL053C COG3P40094 801 aa1.77□□□□□ -2.13
PBP4YDL053C COA1P40452 197 aa1.77□□□□□ -2.13
PBP4YDL053C AGX1P43567 385 aa1.77□□□□□ -2.13
PBP4YDL053C NUP84P52891 726 aa1.77□□□□□ -2.13
PBP4YDL053C SLX9P53251 210 aaPredicted RBP1.77□□□□□ -2.13
PBP4YDL053C SLM2P53955 656 aa1.77□□□□□ -2.13
PBP4YDL053C GMC2Q06201 188 aa1.77□□□□□ -2.13
PBP4YDL053C CTR3Q06686 241 aa1.77□□□□□ -2.13
PBP4YDL053C YOR283WQ12040 230 aaKnown RBP1.77□□□□□ -2.13
PBP4YDL053C FKS1P38631 1876 aaKnown RBP1.77□□□□□ -2.13
PBP4YDL053C SSK22P25390 1331 aaPredicted RBP1.76□□□□□ -2.13
PBP4YDL053C YUH1P35127 236 aa1.76□□□□□ -2.13
PBP4YDL053C TEM1P38987 245 aa1.76□□□□□ -2.13
PBP4YDL053C PRM9P39551 298 aa1.76□□□□□ -2.13
PBP4YDL053C TAD2P47058 250 aa1.76□□□□□ -2.13
PBP4YDL053C YJL016WP47072 561 aa1.76□□□□□ -2.13
PBP4YDL053C DAN1P47178 298 aa1.76□□□□□ -2.13
PBP4YDL053C MDM34P53083 459 aa1.76□□□□□ -2.13
PBP4YDL053C RUD3Q12234 484 aaKnown RBP1.76□□□□□ -2.13
PBP4YDL053C GEP5Q12393 293 aa1.76□□□□□ -2.13
PBP4YDL053C BEM2P39960 2167 aaKnown RBP1.76□□□□□ -2.13
PBP4YDL053C SAC3P46674 1301 aa1.75□□□□□ -2.13
PBP4YDL053C SCO1P23833 295 aa1.75□□□□□ -2.13
PBP4YDL053C NTG1P31378 399 aa1.75□□□□□ -2.13
PBP4YDL053C RNP1P32385 249 aa1.75□□□□□ -2.13
PBP4YDL053C DRE2P36152 348 aa1.75□□□□□ -2.13
PBP4YDL053C MAL32P38158 584 aa1.75□□□□□ -2.13
PBP4YDL053C MAL12P53341 584 aa1.75□□□□□ -2.13
PBP4YDL053C COS6P53344 381 aa1.75□□□□□ -2.13
PBP4YDL053C AAH1P53909 347 aa1.75□□□□□ -2.13
PBP4YDL053C EMI1Q04406 187 aa1.75□□□□□ -2.13
PBP4YDL053C PEX10Q05568 337 aa1.75□□□□□ -2.13
PBP4YDL053C KAP95Q06142 861 aaKnown RBP1.75□□□□□ -2.13
PBP4YDL053C BOP2Q06150 570 aa1.75□□□□□ -2.13
PBP4YDL053C SME1Q12330 94 aaPredicted RBP1.75□□□□□ -2.13
PBP4YDL053C ECM13P38195 257 aa1.74□□□□□ -2.13
PBP4YDL053C TIF34P40217 347 aaKnown RBP1.74□□□□□ -2.13
PBP4YDL053C MRPL49P40858 161 aaPredicted RBP1.74□□□□□ -2.13
PBP4YDL053C PST1Q12355 444 aa1.74□□□□□ -2.13
PBP4YDL053C RAD3P06839 778 aa1.73□□□□□ -2.13
PBP4YDL053C RAD51P25454 400 aa1.73□□□□□ -2.13
PBP4YDL053C YHL026CP38740 315 aa1.73□□□□□ -2.13
PBP4YDL053C RCY1P39531 840 aa1.73□□□□□ -2.13
PBP4YDL053C DDI1P40087 428 aa1.73□□□□□ -2.13
PBP4YDL053C GCN20P43535 752 aaKnown RBP1.73□□□□□ -2.13
PBP4YDL053C LIA1P47120 325 aaKnown RBP1.73□□□□□ -2.13
PBP4YDL053C KAP114P53067 1004 aa1.73□□□□□ -2.13
PBP4YDL053C MAL13P53338 473 aa1.73□□□□□ -2.13
PBP4YDL053C OST6Q03723 332 aa1.73□□□□□ -2.13
PBP4YDL053C ATG38Q05789 226 aaKnown RBP1.73□□□□□ -2.13
PBP4YDL053C YPR172WQ06608 200 aa1.73□□□□□ -2.13
PBP4YDL053C RRT8Q08219 342 aa1.73□□□□□ -2.13
PBP4YDL053C CHD1P32657 1468 aa1.73□□□□□ -2.13
PBP4YDL053C PET100P38958 111 aa1.72□□□□□ -2.13
PBP4YDL053C EMC2P47133 292 aaKnown RBP1.72□□□□□ -2.13
PBP4YDL053C NBP1P52919 319 aaPredicted RBP1.72□□□□□ -2.13
PBP4YDL053C PEX12Q04370 399 aa1.72□□□□□ -2.13
PBP4YDL053C SLD7Q08457 257 aa1.72□□□□□ -2.13
PBP4YDL053C COX2P00410 251 aa1.71□□□□□ -2.14
PBP4YDL053C HIS1P00498 297 aaKnown RBP1.71□□□□□ -2.14
PBP4YDL053C MER1P16523 270 aa1.71□□□□□ -2.14
PBP4YDL053C RPB4P20433 221 aaPredicted RBP1.71□□□□□ -2.14
PBP4YDL053C MRPL25P23369 157 aa1.71□□□□□ -2.14
PBP4YDL053C CWP1P28319 239 aa1.71□□□□□ -2.14
PBP4YDL053C DOA4P32571 926 aa1.71□□□□□ -2.14
PBP4YDL053C RPT5P33297 434 aaKnown RBP1.71□□□□□ -2.14
PBP4YDL053C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
PBP4YDL053C YKT6P36015 200 aaKnown RBP1.71□□□□□ -2.14
PBP4YDL053C MRPL37P36532 105 aa1.71□□□□□ -2.14
PBP4YDL053C NRG2P38082 220 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms