RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C OST3P48439 350 aa3.21□□□□□ -1.9
YPK3YBR028C EBS1Q03466 884 aaKnown RBP3.21□□□□□ -1.9
YPK3YBR028C ATG38Q05789 226 aaKnown RBP3.21□□□□□ -1.9
YPK3YBR028C CLP1Q08685 445 aaPredicted RBP3.21□□□□□ -1.9
YPK3YBR028C RAD3P06839 778 aa3.2□□□□□ -1.9
YPK3YBR028C RPL10P41805 221 aaKnown RBP3.2□□□□□ -1.9
YPK3YBR028C YOR029WQ12243 111 aa3.2□□□□□ -1.9
YPK3YBR028C ZWF1P11412 505 aaKnown RBP3.19□□□□□ -1.9
YPK3YBR028C EHD3P28817 500 aa3.19□□□□□ -1.9
YPK3YBR028C YHI9P38765 294 aa3.19□□□□□ -1.9
YPK3YBR028C SUR2P38992 349 aa3.19□□□□□ -1.9
YPK3YBR028C SMB1P40018 196 aaKnown RBP3.19□□□□□ -1.9
YPK3YBR028C BNA6P43619 295 aa3.19□□□□□ -1.9
YPK3YBR028C GLG2P47011 380 aa3.19□□□□□ -1.9
YPK3YBR028C MIG2P53035 382 aa3.19□□□□□ -1.9
YPK3YBR028C ALG9P53868 555 aaKnown RBP3.19□□□□□ -1.9
YPK3YBR028C PLB3Q08108 686 aa3.19□□□□□ -1.9
YPK3YBR028C RFM1Q12192 310 aa3.19□□□□□ -1.9
YPK3YBR028C MRPL25P23369 157 aa3.18□□□□□ -1.9
YPK3YBR028C MRX3P38172 270 aa3.18□□□□□ -1.9
YPK3YBR028C YHR045WP38775 560 aa3.18□□□□□ -1.9
YPK3YBR028C SPL2P38839 148 aa3.18□□□□□ -1.9
YPK3YBR028C YER084WP40057 128 aa3.18□□□□□ -1.9
YPK3YBR028C RSM27P53305 110 aa3.18□□□□□ -1.9
YPK3YBR028C YOL019WQ08157 551 aa3.18□□□□□ -1.9
YPK3YBR028C YPS3Q12303 508 aa3.18□□□□□ -1.9
YPK3YBR028C MRX4Q12467 430 aa3.18□□□□□ -1.9
YPK3YBR028C YPL119C-AQ3E751 87 aa3.18□□□□□ -1.9
YPK3YBR028C RPB4P20433 221 aaPredicted RBP3.17□□□□□ -1.9
YPK3YBR028C BUD13P46947 266 aaPredicted RBP3.17□□□□□ -1.9
YPK3YBR028C LIA1P47120 325 aaKnown RBP3.17□□□□□ -1.9
YPK3YBR028C HSH155P49955 971 aaKnown RBP3.17□□□□□ -1.9
YPK3YBR028C ATG31Q12421 196 aa3.17□□□□□ -1.9
YPK3YBR028C TDH2P00358 332 aaKnown RBP3.17□□□□□ -1.9
YPK3YBR028C PEX10Q05568 337 aa3.17□□□□□ -1.9
YPK3YBR028C TY3A-GQ12173 290 aa3.17□□□□□ -1.9
YPK3YBR028C MSH5Q12175 901 aa3.17□□□□□ -1.9
YPK3YBR028C TY3A-IQ99219 290 aa3.17□□□□□ -1.9
YPK3YBR028C NUP157P40064 1391 aaKnown RBP3.16□□□□□ -1.9
YPK3YBR028C MET2P08465 486 aa3.16□□□□□ -1.9
YPK3YBR028C ARC19P33204 171 aaKnown RBP3.16□□□□□ -1.9
YPK3YBR028C YKT6P36015 200 aaKnown RBP3.16□□□□□ -1.9
YPK3YBR028C SLX9P53251 210 aaPredicted RBP3.16□□□□□ -1.9
YPK3YBR028C GIM3P53900 129 aa3.16□□□□□ -1.9
YPK3YBR028C CTF19Q02732 369 aa3.16□□□□□ -1.9
YPK3YBR028C FCF1Q05498 189 aaPredicted RBP3.16□□□□□ -1.9
YPK3YBR028C HIS3P06633 220 aa3.15□□□□□ -1.91
YPK3YBR028C VPS3P23643 1011 aa3.15□□□□□ -1.91
YPK3YBR028C TOM40P23644 387 aaKnown RBP3.15□□□□□ -1.91
YPK3YBR028C HOM6P31116 359 aaKnown RBP3.15□□□□□ -1.91
YPK3YBR028C SDH4P37298 181 aa3.15□□□□□ -1.91
YPK3YBR028C YBR096WP38256 230 aa3.15□□□□□ -1.91
YPK3YBR028C YER034WP40022 185 aaKnown RBP3.15□□□□□ -1.91
YPK3YBR028C AAH1P53909 347 aa3.15□□□□□ -1.91
YPK3YBR028C SRL4Q03085 281 aa3.15□□□□□ -1.91
YPK3YBR028C FEX1Q08913 375 aa3.15□□□□□ -1.91
YPK3YBR028C FEX2Q08991 375 aa3.15□□□□□ -1.91
YPK3YBR028C YPL150WQ12152 901 aa3.15□□□□□ -1.91
YPK3YBR028C TIM22Q12328 207 aa3.15□□□□□ -1.91
YPK3YBR028C MED4Q12343 284 aa3.15□□□□□ -1.91
YPK3YBR028C SNF8Q12483 233 aa3.15□□□□□ -1.91
YPK3YBR028C POX1P13711 748 aa3.14□□□□□ -1.91
YPK3YBR028C KRE1P17260 313 aa3.14□□□□□ -1.91
YPK3YBR028C JEN1P36035 616 aa3.14□□□□□ -1.91
YPK3YBR028C YDR209CQ03480 137 aa3.14□□□□□ -1.91
YPK3YBR028C YDR114CQ04597 100 aa3.14□□□□□ -1.91
YPK3YBR028C AGC1Q12482 902 aa3.14□□□□□ -1.91
YPK3YBR028C ISD11Q6Q560 94 aa3.14□□□□□ -1.91
YPK3YBR028C RNA15P25299 296 aaPredicted RBP3.13□□□□□ -1.91
YPK3YBR028C YJL144WP47009 104 aa3.13□□□□□ -1.91
YPK3YBR028C YJL028WP47062 111 aa3.13□□□□□ -1.91
YPK3YBR028C RAD17P48581 401 aa3.13□□□□□ -1.91
YPK3YBR028C NIF3P53081 288 aa3.13□□□□□ -1.91
YPK3YBR028C CGR1P53188 120 aa3.13□□□□□ -1.91
YPK3YBR028C EMI1Q04406 187 aa3.13□□□□□ -1.91
YPK3YBR028C COQ10Q08058 207 aa3.13□□□□□ -1.91
YPK3YBR028C NOT5Q12514 560 aaPredicted RBP3.13□□□□□ -1.91
YPK3YBR028C YPL247CQ12523 523 aa3.13□□□□□ -1.91
YPK3YBR028C ADF1Q2V2Q1 113 aa3.13□□□□□ -1.91
YPK3YBR028C BMH1P29311 267 aaKnown RBP3.12□□□□□ -1.91
YPK3YBR028C DOA4P32571 926 aa3.12□□□□□ -1.91
YPK3YBR028C TCD1P38756 429 aa3.12□□□□□ -1.91
YPK3YBR028C YGL088WP53151 121 aa3.12□□□□□ -1.91
YPK3YBR028C YGL034CP53186 121 aa3.12□□□□□ -1.91
YPK3YBR028C ASI3P53983 676 aa3.12□□□□□ -1.91
YPK3YBR028C CSM4Q08955 156 aa3.12□□□□□ -1.91
YPK3YBR028C YEL009C-AA0A023PZF2 135 aa3.12□□□□□ -1.91
YPK3YBR028C TCP1P12612 559 aaKnown RBP3.12□□□□□ -1.91
YPK3YBR028C MIG1P27705 504 aa3.12□□□□□ -1.91
YPK3YBR028C GCN20P43535 752 aaKnown RBP3.12□□□□□ -1.91
YPK3YBR028C PIR5P46999 287 aa3.12□□□□□ -1.91
YPK3YBR028C JHD2P47156 728 aaPredicted RBP3.12□□□□□ -1.91
YPK3YBR028C PET117Q02771 107 aa3.12□□□□□ -1.91
YPK3YBR028C PAM18Q07914 168 aa3.12□□□□□ -1.91
YPK3YBR028C HRT1Q08273 121 aa3.12□□□□□ -1.91
YPK3YBR028C SMT3Q12306 101 aaKnown RBP3.12□□□□□ -1.91
YPK3YBR028C USE1P53146 245 aa3.11□□□□□ -1.91
YPK3YBR028C BOP2Q06150 570 aa3.11□□□□□ -1.91
YPK3YBR028C SFC1P33303 322 aa3.1□□□□□ -1.91
YPK3YBR028C GDH2P33327 1092 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms