RNA–Protein interactions for RNA: snR35

snR35, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR35, Length 204 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR35snR35 YPL113CQ02961 396 aa2.4□□□□□ -2.03
snR35snR35 RUD3Q12234 484 aaKnown RBP2.4□□□□□ -2.03
snR35snR35 YAL063C-AQ3E791 96 aa2.4□□□□□ -2.03
snR35snR35 FLO11P08640 1367 aa2.39□□□□□ -2.03
snR35snR35 YCR025CP25352 136 aa2.39□□□□□ -2.03
snR35snR35 KRE6P32486 720 aa2.39□□□□□ -2.03
snR35snR35 ATG12P38316 186 aa2.39□□□□□ -2.03
snR35snR35 BIG1P38813 335 aa2.39□□□□□ -2.03
snR35snR35 AVT7P40501 490 aa2.39□□□□□ -2.03
snR35snR35 YIL012WP40551 113 aa2.39□□□□□ -2.03
snR35snR35 UFD1P53044 361 aa2.39□□□□□ -2.03
snR35snR35 MRPL50P53724 139 aa2.39□□□□□ -2.03
snR35snR35 SWS2P53937 143 aa2.39□□□□□ -2.03
snR35snR35 TIM11P81449 96 aaPredicted RBP2.39□□□□□ -2.03
snR35snR35 PET117Q02771 107 aa2.39□□□□□ -2.03
snR35snR35 SDC1Q03323 175 aa2.39□□□□□ -2.03
snR35snR35 BSC6Q08280 497 aa2.39□□□□□ -2.03
snR35snR35 CSM4Q08955 156 aa2.39□□□□□ -2.03
snR35snR35 ATG31Q12421 196 aa2.39□□□□□ -2.03
snR35snR35 SNF8Q12483 233 aa2.39□□□□□ -2.03
snR35snR35 AI5_BETAQ9ZZX0 354 aa2.39□□□□□ -2.03
snR35snR35 CUP2P15315 225 aa2.38□□□□□ -2.03
snR35snR35 RNA15P25299 296 aaPredicted RBP2.38□□□□□ -2.03
snR35snR35 ARO4P32449 370 aaKnown RBP2.38□□□□□ -2.03
snR35snR35 CAT2P32796 670 aaKnown RBP2.38□□□□□ -2.03
snR35snR35 SKI2P35207 1287 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
snR35snR35 MED8P38304 223 aa2.38□□□□□ -2.03
snR35snR35 DED81P38707 554 aaKnown RBP2.38□□□□□ -2.03
snR35snR35 SER33P40510 469 aa2.38□□□□□ -2.03
snR35snR35 NBP35P52920 328 aa2.38□□□□□ -2.03
snR35snR35 MAL13P53338 473 aa2.38□□□□□ -2.03
snR35snR35 MRS2Q01926 470 aa2.38□□□□□ -2.03
snR35snR35 KRE28Q04431 385 aa2.38□□□□□ -2.03
snR35snR35 RNH1Q04740 348 aa2.38□□□□□ -2.03
snR35snR35 YLR283WQ05867 314 aa2.38□□□□□ -2.03
snR35snR35 LOA1Q06508 300 aa2.38□□□□□ -2.03
snR35snR35 PAM18Q07914 168 aa2.38□□□□□ -2.03
snR35snR35 YDL211CQ12121 372 aa2.38□□□□□ -2.03
snR35snR35 TY3A-GQ12173 290 aa2.38□□□□□ -2.03
snR35snR35 TY3A-IQ99219 290 aa2.38□□□□□ -2.03
snR35snR35 RPL4AP10664 362 aaKnown RBP2.37□□□□□ -2.03
snR35snR35 CPT1P17898 393 aa2.37□□□□□ -2.03
snR35snR35 VPS3P23643 1011 aa2.37□□□□□ -2.03
snR35snR35 ERG2P32352 222 aa2.37□□□□□ -2.03
snR35snR35 POP8P38208 133 aa2.37□□□□□ -2.03
snR35snR35 PHO89P38361 574 aa2.37□□□□□ -2.03
snR35snR35 SYS1P41544 203 aa2.37□□□□□ -2.03
snR35snR35 RPL4BP49626 362 aaKnown RBP2.37□□□□□ -2.03
snR35snR35 HST4P53688 370 aa2.37□□□□□ -2.03
snR35snR35 YDR209CQ03480 137 aa2.37□□□□□ -2.03
snR35snR35 NNT1Q05874 261 aa2.37□□□□□ -2.03
snR35snR35 DXO1Q06349 442 aa2.37□□□□□ -2.03
snR35snR35 MSH5Q12175 901 aa2.37□□□□□ -2.03
snR35snR35 YOR029WQ12243 111 aa2.37□□□□□ -2.03
snR35snR35 YCR016WP25617 290 aaKnown RBP2.36□□□□□ -2.03
snR35snR35 GCN20P43535 752 aaKnown RBP2.36□□□□□ -2.03
snR35snR35 SLX9P53251 210 aaPredicted RBP2.36□□□□□ -2.03
snR35snR35 YNL095CP53932 642 aa2.36□□□□□ -2.03
snR35snR35 ATG17Q06410 417 aa2.36□□□□□ -2.03
snR35snR35 YPL264CQ08980 353 aa2.36□□□□□ -2.03
snR35snR35 SGT2Q12118 346 aaKnown RBP2.36□□□□□ -2.03
snR35snR35 HOM6P31116 359 aaKnown RBP2.35□□□□□ -2.03
snR35snR35 QRI5P32344 111 aa2.35□□□□□ -2.03
snR35snR35 SRB4P32569 687 aa2.35□□□□□ -2.03
snR35snR35 MSN4P33749 630 aa2.35□□□□□ -2.03
snR35snR35 HMT1P38074 348 aa2.35□□□□□ -2.03
snR35snR35 SLX1P38324 304 aa2.35□□□□□ -2.03
snR35snR35 SMB1P40018 196 aaKnown RBP2.35□□□□□ -2.03
snR35snR35 YER085CP40058 173 aa2.35□□□□□ -2.03
snR35snR35 YIR035CP40579 254 aa2.35□□□□□ -2.03
snR35snR35 HSH155P49955 971 aaKnown RBP2.35□□□□□ -2.03
snR35snR35 NBP1P52919 319 aaPredicted RBP2.35□□□□□ -2.03
snR35snR35 RSM27P53305 110 aa2.35□□□□□ -2.03
snR35snR35 SWT21P53873 357 aaPredicted RBP2.35□□□□□ -2.03
snR35snR35 FMP41P53889 259 aaKnown RBP2.35□□□□□ -2.03
snR35snR35 EBS1Q03466 884 aaKnown RBP2.35□□□□□ -2.03
snR35snR35 TVP15Q03860 143 aa2.35□□□□□ -2.03
snR35snR35 IES4Q08561 116 aa2.35□□□□□ -2.03
snR35snR35 YOL163WP0CF20 169 aa2.34□□□□□ -2.03
snR35snR35 HEK2P38199 381 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
snR35snR35 FZO1P38297 855 aa2.34□□□□□ -2.03
snR35snR35 RPE1P46969 238 aa2.34□□□□□ -2.03
snR35snR35 GLG2P47011 380 aa2.34□□□□□ -2.03
snR35snR35 USE1P53146 245 aa2.34□□□□□ -2.03
snR35snR35 ZRG17P53735 605 aa2.34□□□□□ -2.03
snR35snR35 ASI3P53983 676 aa2.34□□□□□ -2.03
snR35snR35 OSH6Q02201 448 aa2.34□□□□□ -2.03
snR35snR35 PEX10Q05568 337 aa2.34□□□□□ -2.03
snR35snR35 RFM1Q12192 310 aa2.34□□□□□ -2.03
snR35snR35 YPL119C-AQ3E751 87 aa2.34□□□□□ -2.03
snR35snR35 TDH2P00358 332 aaKnown RBP2.33□□□□□ -2.04
snR35snR35 POX1P13711 748 aa2.33□□□□□ -2.04
snR35snR35 YAK1P14680 807 aa2.33□□□□□ -2.04
snR35snR35 CDC42P19073 191 aa2.33□□□□□ -2.04
snR35snR35 PRE7P23724 241 aaKnown RBP2.33□□□□□ -2.04
snR35snR35 TRM7P38238 310 aaKnown RBP2.33□□□□□ -2.04
snR35snR35 YHL049CP38722 271 aa2.33□□□□□ -2.04
snR35snR35 TCD1P38756 429 aa2.33□□□□□ -2.04
snR35snR35 COS4P43542 379 aa2.33□□□□□ -2.04
snR35snR35 YFR045WP43617 309 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms