RNA–Protein interactions for RNA: YPL176C

TRE1, Transcript of Transferrin receptor-like protein, yeast

Gene TRE1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRE1	YPL176C	PHO80	P20052	293 aa		4.1	□□□□□ -1.75
TRE1	YPL176C	CLB2	P24869	491 aa		4.1	□□□□□ -1.75
TRE1	YPL176C	SAC1	P32368	623 aa	Known RBP	4.1	□□□□□ -1.75
TRE1	YPL176C	SPS18	P32572	300 aa		4.1	□□□□□ -1.75
TRE1	YPL176C	YBR096W	P38256	230 aa		4.1	□□□□□ -1.75
TRE1	YPL176C	NUP57	P48837	541 aa		4.1	□□□□□ -1.75
TRE1	YPL176C	MNN10	P50108	393 aa	Known RBP	4.1	□□□□□ -1.75
TRE1	YPL176C	PHO23	P50947	330 aa		4.1	□□□□□ -1.75
TRE1	YPL176C	MAL13	P53338	473 aa		4.1	□□□□□ -1.75
TRE1	YPL176C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
TRE1	YPL176C	TRS23	Q03784	219 aa		4.1	□□□□□ -1.75
TRE1	YPL176C	YMR166C	Q03829	368 aa		4.1	□□□□□ -1.75
TRE1	YPL176C	NOC4	Q06512	552 aa	Predicted RBP	4.1	□□□□□ -1.75
TRE1	YPL176C	MHR1	Q06630	226 aa		4.1	□□□□□ -1.75
TRE1	YPL176C	THP3	Q12049	470 aa	Known RBP	4.1	□□□□□ -1.75
TRE1	YPL176C	CDC8	P00572	216 aa		4.09	□□□□□ -1.75
TRE1	YPL176C	RPL20A	P0CX23	172 aa	Known RBP	4.09	□□□□□ -1.75
TRE1	YPL176C	RPL20B	P0CX24	172 aa	Predicted RBP	4.09	□□□□□ -1.75
TRE1	YPL176C	AMD1	P15274	810 aa	Known RBP	4.09	□□□□□ -1.75
TRE1	YPL176C	EXO70	P19658	623 aa		4.09	□□□□□ -1.75
TRE1	YPL176C	CTK3	P46963	296 aa	Predicted RBP	4.09	□□□□□ -1.75
TRE1	YPL176C	IRC18	P47056	224 aa		4.09	□□□□□ -1.75
TRE1	YPL176C	YJL016W	P47072	561 aa		4.09	□□□□□ -1.75
TRE1	YPL176C	USE1	P53146	245 aa		4.09	□□□□□ -1.75
TRE1	YPL176C	CDH1	P53197	566 aa		4.09	□□□□□ -1.75
TRE1	YPL176C	YGR151C	P53287	111 aa		4.09	□□□□□ -1.75
TRE1	YPL176C	CAF40	P53829	373 aa		4.09	□□□□□ -1.75
TRE1	YPL176C	DPP1	Q05521	289 aa		4.09	□□□□□ -1.75
TRE1	YPL176C	GRX8	Q05926	109 aa		4.09	□□□□□ -1.75
TRE1	YPL176C	TPO3	Q06451	622 aa		4.09	□□□□□ -1.75
TRE1	YPL176C	IZH4	Q99393	312 aa		4.09	□□□□□ -1.75
TRE1	YPL176C	YER145C-A	A0A023PYF4	145 aa		4.09	□□□□□ -1.76
TRE1	YPL176C	BAR1	P12630	587 aa		4.09	□□□□□ -1.76
TRE1	YPL176C	NUP1	P20676	1076 aa		4.09	□□□□□ -1.76
TRE1	YPL176C	IDP1	P21954	428 aa	Known RBP	4.09	□□□□□ -1.76
TRE1	YPL176C	MCK1	P21965	375 aa	Known RBP	4.09	□□□□□ -1.76
TRE1	YPL176C	YBR242W	P38331	238 aa		4.09	□□□□□ -1.76
TRE1	YPL176C	YER076C	P40049	302 aa		4.09	□□□□□ -1.76
TRE1	YPL176C	MUP1	P50276	574 aa		4.09	□□□□□ -1.76
TRE1	YPL176C	MST27	P53176	234 aa		4.09	□□□□□ -1.76
TRE1	YPL176C	DML1	Q03652	475 aa		4.09	□□□□□ -1.76
TRE1	YPL176C	USV1	Q12132	391 aa		4.09	□□□□□ -1.76
TRE1	YPL176C	ICT1	Q12385	394 aa		4.09	□□□□□ -1.76
TRE1	YPL176C	SNQ2	P32568	1501 aa	Known RBP	4.08	□□□□□ -1.76
TRE1	YPL176C	SAL1	D6W196	494 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	FUN26	P31381	517 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	KAR9	P32526	644 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	MUD1	P32605	298 aa	Known RBP	4.08	□□□□□ -1.76
TRE1	YPL176C	GSP1	P32835	219 aa	Known RBP	4.08	□□□□□ -1.76
TRE1	YPL176C	GSP2	P32836	220 aa	Known RBP	4.08	□□□□□ -1.76
TRE1	YPL176C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
TRE1	YPL176C	PRS3	P38689	320 aa	Known RBP	4.08	□□□□□ -1.76
TRE1	YPL176C	YHR035W	P38769	630 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	RBG1	P39729	369 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	YJR012C	P47087	207 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	YJR030C	P47101	745 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	SMM1	P53720	384 aa	Known RBP	4.08	□□□□□ -1.76
TRE1	YPL176C	YNL040W	P53960	456 aa	Predicted RBP	4.08	□□□□□ -1.76
TRE1	YPL176C	YLR152C	P54072	576 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	ARL3	Q02804	198 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	CSN9	Q03981	162 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	CTR3	Q06686	241 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	IRC13	Q08630	104 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	SIR4	P11978	1358 aa		4.08	□□□□□ -1.76
TRE1	YPL176C	MTF1	P14908	341 aa	Known RBP	4.07	□□□□□ -1.76
TRE1	YPL176C	TVP38	P36164	337 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	CBP4	P37267	147 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	CDC1	P40986	491 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	GUF1	P46943	645 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	HMS2	P47175	358 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	OST3	P48439	350 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	CPR8	P53728	308 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	GAS2	Q06135	555 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	SSK1	Q07084	712 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	LDB18	Q07887	179 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	GAT3	Q07928	141 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	YOR283W	Q12040	230 aa	Known RBP	4.07	□□□□□ -1.76
TRE1	YPL176C	YDL009C	Q12210	107 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	YCL001W-B	Q96VH2	84 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	MEX67	Q99257	599 aa	Known RBP	4.07	□□□□□ -1.76
TRE1	YPL176C	YBT1	P32386	1661 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	CTS1	P29029	562 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	COX13	P32799	129 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	APL3	P38065	1025 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	UBP5	P39944	805 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	FAU1	P40099	211 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	SIM1	P40472	476 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	GAT1	P43574	510 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	TRM9	P49957	279 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	BRR6	P53062	197 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	POP6	P53218	158 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	PCP1	P53259	346 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	AIM34	Q03673	198 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	FRQ1	Q06389	190 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	YLR050C	Q12155	161 aa	Known RBP	4.07	□□□□□ -1.76
TRE1	YPL176C	TPO4	Q12256	659 aa		4.07	□□□□□ -1.76
TRE1	YPL176C	SME1	Q12330	94 aa	Predicted RBP	4.07	□□□□□ -1.76
TRE1	YPL176C	EFG1	Q3E705	233 aa	Known RBP	4.07	□□□□□ -1.76
TRE1	YPL176C	YOR304C-A	O14468	76 aa		4.06	□□□□□ -1.76
TRE1	YPL176C	MRP2	P10663	115 aa	Predicted RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms