RNA–Protein interactions for RNA: YNL272C

SEC2, Transcript of Guanyl-nucleotide exchange factor for the small G-protein Sec4p, yeast

Gene SEC2, Length 2,280 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC2	YNL272C	YLR352W	Q06479	807 aa		3.59	□□□□□ -1.84
SEC2	YNL272C	RKM1	Q08961	583 aa	Predicted RBP	3.59	□□□□□ -1.84
SEC2	YNL272C	TRM10	Q12400	293 aa		3.59	□□□□□ -1.84
SEC2	YNL272C	Q0144	Q9ZZW2	109 aa		3.59	□□□□□ -1.84
SEC2	YNL272C	PEP4	P07267	405 aa	Known RBP	3.58	□□□□□ -1.84
SEC2	YNL272C	ERG9	P29704	444 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	MSN4	P33749	630 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
SEC2	YNL272C	RFC4	P40339	323 aa	Known RBP	3.58	□□□□□ -1.84
SEC2	YNL272C	BPL1	P48445	690 aa	Predicted RBP	3.58	□□□□□ -1.84
SEC2	YNL272C	COS10	P52924	374 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	NQM1	P53228	333 aa	Predicted RBP	3.58	□□□□□ -1.84
SEC2	YNL272C	NUP49	Q02199	472 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	SPO19	Q03029	223 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	YMR087W	Q04299	284 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	ARP10	Q04549	284 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	ATG17	Q06410	417 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	TAZ1	Q06510	381 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	YDL218W	Q07629	317 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	YOR289W	Q12012	251 aa	Predicted RBP	3.58	□□□□□ -1.84
SEC2	YNL272C	PCL9	Q12477	304 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	SFG1	Q12507	346 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	SET6	Q12529	373 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	KIN28	P06242	306 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	NFT1	P0CE68	1218 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	PHO80	P20052	293 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	CNE1	P27825	502 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	MAL32	P38158	584 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	PHO90	P39535	881 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	SFH5	P47008	294 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	MAL12	P53341	584 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	MNT4	P53745	580 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	ACS1	Q01574	713 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	MRPL1	Q04599	285 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	YMR315W	Q04869	349 aa	Known RBP	3.58	□□□□□ -1.84
SEC2	YNL272C	YPR147C	Q06522	304 aa	Known RBP	3.58	□□□□□ -1.84
SEC2	YNL272C	MLC2	Q06580	163 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	HMS1	Q12398	434 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	FLO9	P39712	1322 aa		3.58	□□□□□ -1.84
SEC2	YNL272C	PPA2	P28239	310 aa		3.57	□□□□□ -1.84
SEC2	YNL272C	VMA6	P32366	345 aa	Known RBP	3.57	□□□□□ -1.84
SEC2	YNL272C	YME2	P32843	850 aa		3.57	□□□□□ -1.84
SEC2	YNL272C	YPT10	P38146	199 aa		3.57	□□□□□ -1.84
SEC2	YNL272C	CHK1	P38147	527 aa		3.57	□□□□□ -1.84
SEC2	YNL272C	SHE1	P38200	338 aa		3.57	□□□□□ -1.84
SEC2	YNL272C	GOS1	P38736	223 aa		3.57	□□□□□ -1.84
SEC2	YNL272C	HIS6	P40545	261 aa		3.57	□□□□□ -1.84
SEC2	YNL272C	MNN5	P46982	586 aa		3.57	□□□□□ -1.84
SEC2	YNL272C	EFM3	P47163	339 aa		3.57	□□□□□ -1.84
SEC2	YNL272C	NUP116	Q02630	1113 aa		3.57	□□□□□ -1.84
SEC2	YNL272C	PRP3	Q03338	469 aa	Predicted RBP	3.57	□□□□□ -1.84
SEC2	YNL272C	PRS5	Q12265	496 aa	Known RBP	3.57	□□□□□ -1.84
SEC2	YNL272C	TRA1	P38811	3744 aa		3.57	□□□□□ -1.84
SEC2	YNL272C	UTR1	P21373	530 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	RPS5	P26783	225 aa	Known RBP	3.56	□□□□□ -1.84
SEC2	YNL272C	VBA2	P38358	474 aa	Known RBP	3.56	□□□□□ -1.84
SEC2	YNL272C	RIX1	P38883	763 aa	Predicted RBP	3.56	□□□□□ -1.84
SEC2	YNL272C	FMC1	P40491	155 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	ADO1	P47143	340 aa	Known RBP	3.56	□□□□□ -1.84
SEC2	YNL272C	VOA1	P53262	265 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	BSC5	P53755	489 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	NGL2	Q03264	515 aa	Known RBP	3.56	□□□□□ -1.84
SEC2	YNL272C	MAK3	Q03503	176 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	YDR102C	Q03864	110 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	SPC19	Q03954	165 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	GAS2	Q06135	555 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	CTS2	Q06350	511 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	RRP9	Q06506	573 aa	Known RBP	3.56	□□□□□ -1.84
SEC2	YNL272C	BAG7	Q12128	409 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	RBD2	Q12270	262 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	CBP6	P07253	162 aa	Predicted RBP	3.56	□□□□□ -1.84
SEC2	YNL272C	MRPS28	P21771	286 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	MCM10	P32354	571 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	SUR1	P33300	382 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	SOF1	P33750	489 aa	Known RBP	3.56	□□□□□ -1.84
SEC2	YNL272C	SDS22	P36047	338 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	FLO10	P36170	1169 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	RPN14	P53196	417 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	SAY1	P53324	424 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	BNA7	Q04066	261 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	RNH1	Q04740	348 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	RBS1	Q05672	457 aa	Known RBP	3.56	□□□□□ -1.84
SEC2	YNL272C	NEJ1	Q06148	342 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	YLR173W	Q06247	608 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	YDL114W	Q07530	308 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	MIM1	Q08176	113 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	MED2	Q12124	431 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	YHR214C-E	Q8TGK0	99 aa		3.56	□□□□□ -1.84
SEC2	YNL272C	OPI3	P05375	206 aa		3.55	□□□□□ -1.84
SEC2	YNL272C	ARO7	P32178	256 aa		3.55	□□□□□ -1.84
SEC2	YNL272C	YBR063C	P38083	404 aa		3.55	□□□□□ -1.84
SEC2	YNL272C	BUR6	P40096	142 aa		3.55	□□□□□ -1.84
SEC2	YNL272C	MSY1	P48527	492 aa		3.55	□□□□□ -1.84
SEC2	YNL272C	YGL117W	P53133	265 aa		3.55	□□□□□ -1.84
SEC2	YNL272C	KAP120	Q02932	1032 aa		3.55	□□□□□ -1.84
SEC2	YNL272C	MRP51	Q02950	344 aa		3.55	□□□□□ -1.84
SEC2	YNL272C	TRI1	Q05024	226 aa		3.55	□□□□□ -1.84
SEC2	YNL272C	HRI1	Q05905	244 aa	Known RBP	3.55	□□□□□ -1.84
SEC2	YNL272C	AIM6	Q07716	390 aa		3.55	□□□□□ -1.84
SEC2	YNL272C	NIP7	Q08962	181 aa	Known RBP	3.55	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms