RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C YDL109CQ12103 647 aa4.16□□□□□ -1.74
EAR1YMR171C APC2Q12440 853 aa4.16□□□□□ -1.74
EAR1YMR171C YPR064WQ12492 139 aa4.16□□□□□ -1.74
EAR1YMR171C REV1P12689 985 aa4.15□□□□□ -1.75
EAR1YMR171C CDC23P16522 626 aa4.15□□□□□ -1.75
EAR1YMR171C MAG1P22134 296 aaKnown RBP4.15□□□□□ -1.75
EAR1YMR171C YSR3P23501 404 aa4.15□□□□□ -1.75
EAR1YMR171C RNA14P25298 677 aaKnown RBP4.15□□□□□ -1.75
EAR1YMR171C FUN26P31381 517 aa4.15□□□□□ -1.75
EAR1YMR171C ACB1P31787 87 aa4.15□□□□□ -1.75
EAR1YMR171C ARC19P33204 171 aaKnown RBP4.15□□□□□ -1.75
EAR1YMR171C TCD2P36101 447 aaKnown RBP4.15□□□□□ -1.75
EAR1YMR171C DTR1P38125 572 aa4.15□□□□□ -1.75
EAR1YMR171C PAU24P38155 120 aa4.15□□□□□ -1.75
EAR1YMR171C SRO77P38163 1010 aa4.15□□□□□ -1.75
EAR1YMR171C BNA4P38169 460 aa4.15□□□□□ -1.75
EAR1YMR171C RTC2P38279 296 aa4.15□□□□□ -1.75
EAR1YMR171C LOH1P47055 219 aa4.15□□□□□ -1.75
EAR1YMR171C MDE1P47095 244 aa4.15□□□□□ -1.75
EAR1YMR171C PMT5P52867 743 aa4.15□□□□□ -1.75
EAR1YMR171C YGL101WP53144 215 aa4.15□□□□□ -1.75
EAR1YMR171C PAU12P53343 120 aa4.15□□□□□ -1.75
EAR1YMR171C ERG13P54839 491 aaKnown RBP4.15□□□□□ -1.75
EAR1YMR171C YPL068CQ02749 293 aa4.15□□□□□ -1.75
EAR1YMR171C MSC1Q03104 513 aa4.15□□□□□ -1.75
EAR1YMR171C YMR310CQ04867 317 aaPredicted RBP4.15□□□□□ -1.75
EAR1YMR171C COX20Q04935 205 aa4.15□□□□□ -1.75
EAR1YMR171C MRPL35Q06678 367 aa4.15□□□□□ -1.75
EAR1YMR171C SSK1Q07084 712 aa4.15□□□□□ -1.75
EAR1YMR171C TIR4Q12218 487 aaPredicted RBP4.15□□□□□ -1.75
EAR1YMR171C INP53Q12271 1107 aa4.15□□□□□ -1.75
EAR1YMR171C SKS1Q12505 502 aa4.15□□□□□ -1.75
EAR1YMR171C YHR213W-AQ8TGT4 77 aa4.15□□□□□ -1.75
EAR1YMR171C YKR104WP0CE69 306 aa4.14□□□□□ -1.75
EAR1YMR171C YOL162WP0CF19 215 aa4.14□□□□□ -1.75
EAR1YMR171C NHP6BP11633 99 aaKnown RBP4.14□□□□□ -1.75
EAR1YMR171C MCK1P21965 375 aaKnown RBP4.14□□□□□ -1.75
EAR1YMR171C STE50P25344 346 aa4.14□□□□□ -1.75
EAR1YMR171C CPR3P25719 182 aa4.14□□□□□ -1.75
EAR1YMR171C DOA4P32571 926 aa4.14□□□□□ -1.75
EAR1YMR171C WBP1P33767 430 aaKnown RBP4.14□□□□□ -1.75
EAR1YMR171C GRE3P38715 327 aaKnown RBP RIP-Chip data4.14□□□□□ -1.75not detected
EAR1YMR171C HTD2P38790 280 aaKnown RBP4.14□□□□□ -1.75
EAR1YMR171C UIP3P39547 235 aa4.14□□□□□ -1.75
EAR1YMR171C XBP1P40489 647 aa4.14□□□□□ -1.75
EAR1YMR171C ALK1P43633 760 aaKnown RBP4.14□□□□□ -1.75
EAR1YMR171C LCL3P53153 274 aa4.14□□□□□ -1.75
EAR1YMR171C RSF1Q05043 376 aa4.14□□□□□ -1.75
EAR1YMR171C RRP40Q08285 240 aaKnown RBP4.14□□□□□ -1.75
EAR1YMR171C ATG41Q12048 136 aa4.14□□□□□ -1.75
EAR1YMR171C AEP3Q12089 606 aa4.14□□□□□ -1.75
EAR1YMR171C SPC3Q12133 184 aa4.14□□□□□ -1.75
EAR1YMR171C ATP14Q12349 124 aa4.14□□□□□ -1.75
EAR1YMR171C RDI1Q12434 202 aa4.14□□□□□ -1.75
EAR1YMR171C PSF1Q12488 208 aa4.14□□□□□ -1.75
EAR1YMR171C MDM35O60200 86 aa4.13□□□□□ -1.75
EAR1YMR171C DPM1P14020 267 aaKnown RBP4.13□□□□□ -1.75
EAR1YMR171C PDA1P16387 420 aaKnown RBP4.13□□□□□ -1.75
EAR1YMR171C UTR1P21373 530 aa4.13□□□□□ -1.75
EAR1YMR171C VMA16P23968 213 aa4.13□□□□□ -1.75
EAR1YMR171C ADE1P27616 306 aa4.13□□□□□ -1.75
EAR1YMR171C NAM9P27929 486 aa4.13□□□□□ -1.75
EAR1YMR171C ECT1P33412 323 aa4.13□□□□□ -1.75
EAR1YMR171C COS8P38723 381 aa4.13□□□□□ -1.75
EAR1YMR171C GEP4P38812 185 aa4.13□□□□□ -1.75
EAR1YMR171C LSM12P38828 187 aaKnown RBP4.13□□□□□ -1.75
EAR1YMR171C YHR122WP38829 231 aa4.13□□□□□ -1.75
EAR1YMR171C ALP1P38971 573 aa4.13□□□□□ -1.75
EAR1YMR171C VEL1P53058 206 aa4.13□□□□□ -1.75
EAR1YMR171C PGA1P53896 198 aa4.13□□□□□ -1.75
EAR1YMR171C TIM10P87108 93 aa4.13□□□□□ -1.75
EAR1YMR171C RHO4Q00246 291 aa4.13□□□□□ -1.75
EAR1YMR171C NAT4Q04751 285 aa4.13□□□□□ -1.75
EAR1YMR171C ROY1Q04847 553 aa4.13□□□□□ -1.75
EAR1YMR171C FDH1Q08911 376 aa4.13□□□□□ -1.75
EAR1YMR171C YPL272CQ08984 517 aa4.13□□□□□ -1.75
EAR1YMR171C YOR114WQ12219 294 aa4.13□□□□□ -1.75
EAR1YMR171C YOL107WQ12239 342 aa4.13□□□□□ -1.75
EAR1YMR171C CRC1Q12289 327 aa4.13□□□□□ -1.75
EAR1YMR171C RRI1Q12468 440 aa4.13□□□□□ -1.75
EAR1YMR171C FRE6Q12473 712 aa4.13□□□□□ -1.75
EAR1YMR171C YGL194C-AQ2V2P6 80 aa4.13□□□□□ -1.75
EAR1YMR171C MRP1P10662 321 aaKnown RBP4.13□□□□□ -1.75
EAR1YMR171C RPL3P14126 387 aaKnown RBP4.13□□□□□ -1.75
EAR1YMR171C RPB5P20434 215 aa4.13□□□□□ -1.75
EAR1YMR171C HXT2P23585 541 aa4.13□□□□□ -1.75
EAR1YMR171C ECM25P32525 599 aa4.13□□□□□ -1.75
EAR1YMR171C VPS17P32913 551 aa4.13□□□□□ -1.75
EAR1YMR171C DOA1P36037 715 aa4.13□□□□□ -1.75
EAR1YMR171C THI2P38141 450 aa4.13□□□□□ -1.75
EAR1YMR171C SGF73P53165 657 aa4.13□□□□□ -1.75
EAR1YMR171C KAP120Q02932 1032 aa4.13□□□□□ -1.75
EAR1YMR171C YDR249CQ03787 373 aa4.13□□□□□ -1.75
EAR1YMR171C VBA1Q04301 562 aa4.13□□□□□ -1.75
EAR1YMR171C DCR2Q05924 578 aa4.13□□□□□ -1.75
EAR1YMR171C VPS68Q12016 184 aa4.13□□□□□ -1.75
EAR1YMR171C BTS1Q12051 335 aa4.13□□□□□ -1.75
EAR1YMR171C RTC5Q12108 567 aaKnown RBP4.13□□□□□ -1.75
EAR1YMR171C YPR022CQ12139 1133 aa4.13□□□□□ -1.75
EAR1YMR171C PRM4Q12498 284 aa4.13□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms