RNA–Protein interactions for RNA: YLR383W

SMC6, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene SMC6, Length 3,345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC6YLR383W TPN1P53099 579 aa2.1□□□□□ -2.07
SMC6YLR383W YGR168CP53293 376 aa2.1□□□□□ -2.07
SMC6YLR383W PAU12P53343 120 aa2.1□□□□□ -2.07
SMC6YLR383W APC4Q04601 652 aa2.1□□□□□ -2.07
SMC6YLR383W IPK1Q06667 281 aa2.1□□□□□ -2.07
SMC6YLR383W RCN2Q12044 265 aa2.1□□□□□ -2.07
SMC6YLR383W HER1Q12276 1246 aa2.1□□□□□ -2.07
SMC6YLR383W YDR157WA0A023PZE8 133 aa2.1□□□□□ -2.07
SMC6YLR383W RHO1P06780 209 aaKnown RBP2.1□□□□□ -2.07
SMC6YLR383W YOL162WP0CF19 215 aa2.1□□□□□ -2.07
SMC6YLR383W MRP1P10662 321 aaKnown RBP2.1□□□□□ -2.07
SMC6YLR383W CHA1P25379 360 aaKnown RBP2.1□□□□□ -2.07
SMC6YLR383W RAD51P25454 400 aa2.1□□□□□ -2.07
SMC6YLR383W PRP21P32524 280 aaPredicted RBP2.1□□□□□ -2.07
SMC6YLR383W DOA4P32571 926 aa2.1□□□□□ -2.07
SMC6YLR383W NRP1P32770 719 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
SMC6YLR383W REC114P32841 428 aa2.1□□□□□ -2.07
SMC6YLR383W CHS7P38843 316 aa2.1□□□□□ -2.07
SMC6YLR383W TDA11P38854 504 aa2.1□□□□□ -2.07
SMC6YLR383W MEP2P41948 499 aa2.1□□□□□ -2.07
SMC6YLR383W GWT1P47026 490 aa2.1□□□□□ -2.07
SMC6YLR383W YGL114WP53134 725 aa2.1□□□□□ -2.07
SMC6YLR383W GPI1P53306 609 aa2.1□□□□□ -2.07
SMC6YLR383W YPL108WQ02872 168 aaPredicted RBP2.1□□□□□ -2.07
SMC6YLR383W DPB4Q04603 196 aaKnown RBP2.1□□□□□ -2.07
SMC6YLR383W YHC1Q05900 231 aaKnown RBP2.1□□□□□ -2.07
SMC6YLR383W YOR385WQ08909 290 aa2.1□□□□□ -2.07
SMC6YLR383W YPR064WQ12492 139 aa2.1□□□□□ -2.07
SMC6YLR383W YER145C-AA0A023PYF4 145 aa2.09□□□□□ -2.07
SMC6YLR383W PUT1P09368 476 aa2.09□□□□□ -2.07
SMC6YLR383W SNF4P12904 322 aa2.09□□□□□ -2.07
SMC6YLR383W SPT15P13393 240 aaKnown RBP2.09□□□□□ -2.07
SMC6YLR383W GAS1P22146 559 aaKnown RBP2.09□□□□□ -2.07
SMC6YLR383W RPI1P23250 407 aaKnown RBP2.09□□□□□ -2.07
SMC6YLR383W RHB1P25378 209 aa2.09□□□□□ -2.07
SMC6YLR383W RPC19P28000 142 aaKnown RBP2.09□□□□□ -2.07
SMC6YLR383W FUN19P28003 413 aaPredicted RBP2.09□□□□□ -2.07
SMC6YLR383W SNC1P31109 117 aa2.09□□□□□ -2.07
SMC6YLR383W TIM12P32830 109 aa2.09□□□□□ -2.07
SMC6YLR383W ASK1P35734 292 aa2.09□□□□□ -2.07
SMC6YLR383W YPK3P38070 525 aa2.09□□□□□ -2.07
SMC6YLR383W YGP1P38616 354 aaKnown RBP2.09□□□□□ -2.07
SMC6YLR383W PCL6P40038 420 aa2.09□□□□□ -2.07
SMC6YLR383W HPM1P40481 377 aa2.09□□□□□ -2.07
SMC6YLR383W GVP36P40531 326 aaKnown RBP2.09□□□□□ -2.07
SMC6YLR383W CUP9P41817 306 aa2.09□□□□□ -2.07
SMC6YLR383W FMP32P43557 207 aa2.09□□□□□ -2.07
SMC6YLR383W IBA57P47158 497 aa2.09□□□□□ -2.07
SMC6YLR383W ATG4P53867 494 aa2.09□□□□□ -2.07
SMC6YLR383W TAF12Q03761 539 aa2.09□□□□□ -2.07
SMC6YLR383W YDR179W-AQ03983 463 aa2.09□□□□□ -2.07
SMC6YLR383W YDR387CQ04162 555 aa2.09□□□□□ -2.07
SMC6YLR383W SMP3Q04174 516 aa2.09□□□□□ -2.07
SMC6YLR383W ARP10Q04549 284 aa2.09□□□□□ -2.07
SMC6YLR383W BAG7Q12128 409 aa2.09□□□□□ -2.07
SMC6YLR383W PAD1P33751 242 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07 RIP-Chip
SMC6YLR383W YOX1P34161 385 aa2.09□□□□□ -2.07
SMC6YLR383W MRPL39P36533 70 aa2.09□□□□□ -2.07
SMC6YLR383W XBP1P40489 647 aa2.09□□□□□ -2.07
SMC6YLR383W UTP25P40498 721 aaKnown RBP2.09□□□□□ -2.07
SMC6YLR383W VPS73P53142 486 aaKnown RBP2.09□□□□□ -2.07
SMC6YLR383W MTQ1P53944 314 aa2.09□□□□□ -2.07
SMC6YLR383W YNL046WP53956 172 aa2.09□□□□□ -2.07
SMC6YLR383W SCS7Q03529 384 aa2.09□□□□□ -2.07
SMC6YLR383W OST6Q03723 332 aa2.09□□□□□ -2.07
SMC6YLR383W CRN1Q06440 651 aa2.09□□□□□ -2.07
SMC6YLR383W CYK3Q07533 885 aa2.09□□□□□ -2.07
SMC6YLR383W MSH5Q12175 901 aa2.09□□□□□ -2.07
SMC6YLR383W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
SMC6YLR383W MED4Q12343 284 aa2.09□□□□□ -2.07
SMC6YLR383W PSF1Q12488 208 aa2.09□□□□□ -2.07
SMC6YLR383W YJR112W-AQ3E743 109 aa2.09□□□□□ -2.07
SMC6YLR383W CAM1P29547 415 aaKnown RBP2.09□□□□□ -2.08
SMC6YLR383W HYM1P32464 399 aa2.09□□□□□ -2.08
SMC6YLR383W PPZ2P33329 710 aa2.09□□□□□ -2.08
SMC6YLR383W LHP1P33399 275 aaKnown RBP2.09□□□□□ -2.08
SMC6YLR383W FES1P38260 290 aa2.09□□□□□ -2.08
SMC6YLR383W VBA2P38358 474 aaKnown RBP2.09□□□□□ -2.08
SMC6YLR383W GPI16P38875 610 aa2.09□□□□□ -2.08
SMC6YLR383W SMB1P40018 196 aaKnown RBP2.09□□□□□ -2.08
SMC6YLR383W CCS1P40202 249 aaKnown RBP2.09□□□□□ -2.08
SMC6YLR383W AVT7P40501 490 aa2.09□□□□□ -2.08
SMC6YLR383W YFL015CP43578 164 aa2.09□□□□□ -2.08
SMC6YLR383W PRM8P53174 237 aa2.09□□□□□ -2.08
SMC6YLR383W STD1Q02794 444 aa2.09□□□□□ -2.08
SMC6YLR383W YPL039WQ03080 316 aa2.09□□□□□ -2.08
SMC6YLR383W CGI121Q03705 181 aaKnown RBP2.09□□□□□ -2.08
SMC6YLR383W FMP45Q07651 309 aa2.09□□□□□ -2.08
SMC6YLR383W RRG7Q08774 242 aaPredicted RBP2.09□□□□□ -2.08
SMC6YLR383W MHF1Q3E835 90 aa2.09□□□□□ -2.08
SMC6YLR383W YER175W-AQ8TGU4 54 aa2.09□□□□□ -2.08
SMC6YLR383W RAS2P01120 322 aaKnown RBP2.08□□□□□ -2.08
SMC6YLR383W RPL20AP0CX23 172 aaKnown RBP2.08□□□□□ -2.08
SMC6YLR383W RPL20BP0CX24 172 aaPredicted RBP2.08□□□□□ -2.08
SMC6YLR383W MRPS28P21771 286 aa2.08□□□□□ -2.08
SMC6YLR383W SDH3P33421 198 aa2.08□□□□□ -2.08
SMC6YLR383W CBP4P37267 147 aa2.08□□□□□ -2.08
SMC6YLR383W APD1P38281 316 aa2.08□□□□□ -2.08
SMC6YLR383W PTI1P39927 425 aaPredicted RBP2.08□□□□□ -2.08
SMC6YLR383W RRG9P40156 214 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms