RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C ATP22P50273 684 aaPredicted RBP2.73□□□□□ -1.97
ATG27YJL178C ROG1P53118 685 aa2.73□□□□□ -1.97
ATG27YJL178C AQR1P53943 586 aa2.73□□□□□ -1.97
ATG27YJL178C SED5Q01590 340 aa2.73□□□□□ -1.97
ATG27YJL178C CIK1Q01649 594 aa2.73□□□□□ -1.97
ATG27YJL178C YMR226CQ05016 267 aaKnown RBP2.73□□□□□ -1.97
ATG27YJL178C NDE2Q07500 545 aa2.73□□□□□ -1.97
ATG27YJL178C RPN8Q08723 338 aaKnown RBP2.73□□□□□ -1.97
ATG27YJL178C YOR012WQ12351 137 aa2.73□□□□□ -1.97
ATG27YJL178C MHF2Q3E829 80 aa2.73□□□□□ -1.97
ATG27YJL178C SRN2Q99176 213 aa2.73□□□□□ -1.97
ATG27YJL178C CBP2P03874 630 aaPredicted RBP2.72□□□□□ -1.97
ATG27YJL178C OPI3P05375 206 aa2.72□□□□□ -1.97
ATG27YJL178C RPS14AP06367 137 aaKnown RBP2.72□□□□□ -1.97
ATG27YJL178C CPA1P07258 411 aaKnown RBP2.72□□□□□ -1.97
ATG27YJL178C RPC40P07703 335 aaKnown RBP2.72□□□□□ -1.97
ATG27YJL178C FBA1P14540 359 aaKnown RBP2.72□□□□□ -1.97
ATG27YJL178C DPB2P24482 689 aaPredicted RBP2.72□□□□□ -1.97
ATG27YJL178C PCL1P24867 279 aa2.72□□□□□ -1.97
ATG27YJL178C ITR2P30606 609 aa2.72□□□□□ -1.97
ATG27YJL178C NRP1P32770 719 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
ATG27YJL178C MGM101P32787 269 aaKnown RBP2.72□□□□□ -1.97
ATG27YJL178C YKR015CP36111 568 aa2.72□□□□□ -1.97
ATG27YJL178C UTH1P36135 365 aa2.72□□□□□ -1.97
ATG27YJL178C YCR087C-AP37263 153 aa2.72□□□□□ -1.97
ATG27YJL178C QDR3P38227 689 aa2.72□□□□□ -1.97
ATG27YJL178C EGD2P38879 174 aaKnown RBP2.72□□□□□ -1.97
ATG27YJL178C RPS14BP39516 138 aaKnown RBP2.72□□□□□ -1.97
ATG27YJL178C AIM10P39965 576 aaKnown RBP2.72□□□□□ -1.97
ATG27YJL178C YER034WP40022 185 aaKnown RBP2.72□□□□□ -1.97
ATG27YJL178C MEP1P40260 492 aa2.72□□□□□ -1.97
ATG27YJL178C LCB3P47013 409 aa2.72□□□□□ -1.97
ATG27YJL178C YJR149WP47177 404 aa2.72□□□□□ -1.97
ATG27YJL178C TOS2P50078 622 aa2.72□□□□□ -1.97
ATG27YJL178C FLC3P53121 802 aa2.72□□□□□ -1.97
ATG27YJL178C MPS2P53159 387 aa2.72□□□□□ -1.97
ATG27YJL178C YNR068CP53754 272 aa2.72□□□□□ -1.97
ATG27YJL178C YNL260CP53846 198 aa2.72□□□□□ -1.97
ATG27YJL178C IGO1P53897 168 aa2.72□□□□□ -1.97
ATG27YJL178C TMA20P89886 181 aaPredicted RBP2.72□□□□□ -1.97
ATG27YJL178C VHS1Q03785 461 aa2.72□□□□□ -1.97
ATG27YJL178C APC4Q04601 652 aa2.72□□□□□ -1.97
ATG27YJL178C ATG17Q06410 417 aa2.72□□□□□ -1.97
ATG27YJL178C MDM36Q06820 579 aa2.72□□□□□ -1.97
ATG27YJL178C MFG1Q07684 458 aa2.72□□□□□ -1.97
ATG27YJL178C YLL007CQ07799 665 aa2.72□□□□□ -1.97
ATG27YJL178C RPN5Q12250 445 aaKnown RBP2.72□□□□□ -1.97
ATG27YJL178C RRP42Q12277 265 aaPredicted RBP2.72□□□□□ -1.97
ATG27YJL178C RNH203Q12338 110 aa2.72□□□□□ -1.97
ATG27YJL178C JID1Q12350 301 aa2.72□□□□□ -1.97
ATG27YJL178C GTT2Q12390 233 aa2.72□□□□□ -1.97
ATG27YJL178C YPL119C-AQ3E751 87 aa2.72□□□□□ -1.97
ATG27YJL178C SLH1P53327 1967 aaKnown RBP2.72□□□□□ -1.97
ATG27YJL178C YPR096CO13587 100 aa2.71□□□□□ -1.98
ATG27YJL178C TPK3P05986 398 aa2.71□□□□□ -1.98
ATG27YJL178C PDE2P06776 526 aa2.71□□□□□ -1.98
ATG27YJL178C GAL3P13045 520 aa2.71□□□□□ -1.98
ATG27YJL178C MSI1P13712 422 aa2.71□□□□□ -1.98
ATG27YJL178C SLM5P25345 492 aaKnown RBP2.71□□□□□ -1.98
ATG27YJL178C PUP2P32379 260 aa2.71□□□□□ -1.98
ATG27YJL178C MEI5P32489 222 aa2.71□□□□□ -1.98
ATG27YJL178C ZUO1P32527 433 aaKnown RBP2.71□□□□□ -1.98
ATG27YJL178C CAT2P32796 670 aaKnown RBP2.71□□□□□ -1.98
ATG27YJL178C MRPL6P32904 214 aa2.71□□□□□ -1.98
ATG27YJL178C GDH2P33327 1092 aaKnown RBP2.71□□□□□ -1.98
ATG27YJL178C SPO23P33757 523 aa2.71□□□□□ -1.98
ATG27YJL178C YPT52P36018 234 aaKnown RBP2.71□□□□□ -1.98
ATG27YJL178C GOS1P38736 223 aa2.71□□□□□ -1.98
ATG27YJL178C YPT35P38815 214 aaKnown RBP2.71□□□□□ -1.98
ATG27YJL178C GGC1P38988 300 aa2.71□□□□□ -1.98
ATG27YJL178C SOP4P39543 234 aaPredicted RBP2.71□□□□□ -1.98
ATG27YJL178C MIG3P39943 394 aa2.71□□□□□ -1.98
ATG27YJL178C KRE29P40026 464 aa2.71□□□□□ -1.98
ATG27YJL178C THO1P40040 218 aaKnown RBP2.71□□□□□ -1.98
ATG27YJL178C PRE6P40303 254 aaKnown RBP2.71□□□□□ -1.98
ATG27YJL178C MSS2P40990 351 aa2.71□□□□□ -1.98
ATG27YJL178C GCN20P43535 752 aaKnown RBP2.71□□□□□ -1.98
ATG27YJL178C PMT5P52867 743 aa2.71□□□□□ -1.98
ATG27YJL178C MDM34P53083 459 aa2.71□□□□□ -1.98
ATG27YJL178C SYF2P53277 215 aaPredicted RBP2.71□□□□□ -1.98
ATG27YJL178C YNL140CP53910 189 aa2.71□□□□□ -1.98
ATG27YJL178C MEH1Q02205 184 aa2.71□□□□□ -1.98
ATG27YJL178C TLG1Q03322 224 aa2.71□□□□□ -1.98
ATG27YJL178C TDA1Q03533 586 aa2.71□□□□□ -1.98
ATG27YJL178C YGK3Q12222 375 aaPredicted RBP2.71□□□□□ -1.98
ATG27YJL178C YDL199CQ12407 687 aa2.71□□□□□ -1.98
ATG27YJL178C NAG1Q8TGN9 163 aa2.71□□□□□ -1.98
ATG27YJL178C FAB1P34756 2278 aa2.7□□□□□ -1.98
ATG27YJL178C RPL1AP0CX43 217 aaKnown RBP2.7□□□□□ -1.98
ATG27YJL178C RPL1BP0CX44 217 aaKnown RBP2.7□□□□□ -1.98
ATG27YJL178C MER1P16523 270 aa2.7□□□□□ -1.98
ATG27YJL178C FPR1P20081 114 aaKnown RBP2.7□□□□□ -1.98
ATG27YJL178C RPB5P20434 215 aa2.7□□□□□ -1.98
ATG27YJL178C GRR1P24814 1151 aa2.7□□□□□ -1.98
ATG27YJL178C UTP11P34247 250 aaPredicted RBP2.7□□□□□ -1.98
ATG27YJL178C TPO5P36029 618 aa2.7□□□□□ -1.98
ATG27YJL178C YHK8P38776 514 aa2.7□□□□□ -1.98
ATG27YJL178C MNN9P39107 395 aaKnown RBP2.7□□□□□ -1.98
ATG27YJL178C AIM2P39721 246 aa2.7□□□□□ -1.98
ATG27YJL178C GIM4P40005 111 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms