RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	RER1	P25560	188 aa		4.59	□□□□□ -1.67
RSC30	YHR056C	ARC19	P33204	171 aa	Known RBP	4.59	□□□□□ -1.67
RSC30	YHR056C	PUS4	P48567	403 aa	Known RBP	4.59	□□□□□ -1.67
RSC30	YHR056C	YMR254C	Q04838	102 aa		4.59	□□□□□ -1.67
RSC30	YHR056C	BGL2	P15703	313 aa	Known RBP	4.59	□□□□□ -1.67
RSC30	YHR056C	HXT2	P23585	541 aa		4.59	□□□□□ -1.67
RSC30	YHR056C	RPN2	P32565	945 aa	Known RBP	4.59	□□□□□ -1.67
RSC30	YHR056C	BAP2	P38084	609 aa		4.59	□□□□□ -1.67
RSC30	YHR056C	PRE3	P38624	215 aa		4.59	□□□□□ -1.67
RSC30	YHR056C	STB1	P42845	420 aa		4.59	□□□□□ -1.67
RSC30	YHR056C	NOP9	P47077	666 aa	Known RBP	4.59	□□□□□ -1.67
RSC30	YHR056C	WSC2	P53832	503 aa		4.59	□□□□□ -1.67
RSC30	YHR056C	TMA19	P35691	167 aa	Known RBP	4.59	□□□□□ -1.68
RSC30	YHR056C	HIS6	P40545	261 aa		4.59	□□□□□ -1.68
RSC30	YHR056C	RET2	P43621	546 aa		4.59	□□□□□ -1.68
RSC30	YHR056C	SYF2	P53277	215 aa	Predicted RBP	4.59	□□□□□ -1.68
RSC30	YHR056C	YLR108C	Q12259	485 aa		4.59	□□□□□ -1.68
RSC30	YHR056C	PHO4	P07270	312 aa	Known RBP	4.58	□□□□□ -1.68
RSC30	YHR056C	PRE4	P30657	266 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	YCR041W	P37265	110 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	SIC1	P38634	284 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	NAS2	P40555	220 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	SAM37	P50110	327 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	AVT4	P50944	713 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	DSL1	P53847	754 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	SPG4	Q04438	115 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	FRE3	Q08905	711 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	COX5B	P00425	151 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	GDH1	P07262	454 aa	Known RBP	4.58	□□□□□ -1.68
RSC30	YHR056C	MSS18	P08593	268 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	KRR1	P25586	316 aa	Predicted RBP	4.58	□□□□□ -1.68
RSC30	YHR056C	RMD6	P39975	231 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	SLI1	P53304	468 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	SAM50	P53969	484 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	NUP49	Q02199	472 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	UTP15	Q04305	513 aa	Known RBP	4.58	□□□□□ -1.68
RSC30	YHR056C	BRE4	Q07660	1125 aa		4.58	□□□□□ -1.68
RSC30	YHR056C	NFT1	P0CE68	1218 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	YBR063C	P38083	404 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	RPA43	P46669	326 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	TAF4	P50105	388 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	ABZ2	Q03266	374 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	YMR166C	Q03829	368 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	CAC2	Q04199	468 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	YMR087W	Q04299	284 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	MRPL23	Q12487	163 aa	Predicted RBP	4.57	□□□□□ -1.68
RSC30	YHR056C	RPC40	P07703	335 aa	Known RBP	4.57	□□□□□ -1.68
RSC30	YHR056C	SNF6	P18888	332 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	PEX3	P28795	441 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	RPC82	P32349	654 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	YBR144C	P34215	104 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	YMR105W-A	Q8TGS8	64 aa		4.57	□□□□□ -1.68
RSC30	YHR056C	MRP8	P35719	219 aa		4.56	□□□□□ -1.68
RSC30	YHR056C	SWD2	P36104	329 aa	Predicted RBP	4.56	□□□□□ -1.68
RSC30	YHR056C	SDH4	P37298	181 aa		4.56	□□□□□ -1.68
RSC30	YHR056C	CTK2	P46962	323 aa		4.56	□□□□□ -1.68
RSC30	YHR056C	YNL033W	P53964	284 aa		4.56	□□□□□ -1.68
RSC30	YHR056C	YNL019C	P53975	284 aa		4.56	□□□□□ -1.68
RSC30	YHR056C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
RSC30	YHR056C	COX2	P00410	251 aa		4.56	□□□□□ -1.68
RSC30	YHR056C	TY1A-H	P0C2I4	478 aa	Known RBP	4.56	□□□□□ -1.68
RSC30	YHR056C	ATP10	P18496	279 aa		4.56	□□□□□ -1.68
RSC30	YHR056C	CDC10	P25342	322 aa	Known RBP	4.56	□□□□□ -1.68
RSC30	YHR056C	FEN2	P25621	512 aa	Known RBP	4.56	□□□□□ -1.68
RSC30	YHR056C	RPS20	P38701	121 aa	Known RBP	4.56	□□□□□ -1.68
RSC30	YHR056C	GRC3	Q07845	632 aa		4.56	□□□□□ -1.68
RSC30	YHR056C	SPC3	Q12133	184 aa		4.56	□□□□□ -1.68
RSC30	YHR056C	TFC1	P32367	649 aa		4.55	□□□□□ -1.68
RSC30	YHR056C	YOR289W	Q12012	251 aa	Predicted RBP	4.55	□□□□□ -1.68
RSC30	YHR056C	MES1	P00958	751 aa	Known RBP	4.55	□□□□□ -1.68
RSC30	YHR056C	YJL016W	P47072	561 aa		4.55	□□□□□ -1.68
RSC30	YHR056C	YGR045C	P53229	120 aa		4.55	□□□□□ -1.68
RSC30	YHR056C	UBP2	Q01476	1272 aa		4.55	□□□□□ -1.68
RSC30	YHR056C	GPI11	Q06636	219 aa		4.55	□□□□□ -1.68
RSC30	YHR056C	YDL007C-A	Q2V2Q0	85 aa		4.55	□□□□□ -1.68
RSC30	YHR056C	TPK3	P05986	398 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	PHO80	P20052	293 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	VMA3	P25515	160 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	YCL002C	P25565	263 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	YKL077W	P36081	392 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	YPK3	P38070	525 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	THI2	P38141	450 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	FZO1	P38297	855 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	GON7	P46984	123 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	COS10	P52924	374 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	LIP2	Q06005	328 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	ISA2	Q12425	185 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	YCP4	P25349	247 aa	Known RBP	4.54	□□□□□ -1.68
RSC30	YHR056C	CTF8	P38877	133 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	ECM1	P39715	212 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	AAD14	P42884	376 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	MIG2	P53035	382 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	GET1	P53192	235 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	MRPL13	Q02204	264 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	HFD1	Q04458	532 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	SPR28	Q04921	423 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	YLR281C	Q05863	155 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	AIM6	Q07716	390 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	BBP1	Q12365	385 aa		4.54	□□□□□ -1.68
RSC30	YHR056C	HEM13	P11353	328 aa	Known RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms