RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C YPL247CQ12523 523 aa1.2□□□□□ -2.22
MSH3YCR092C YOL159C-AQ3E769 90 aa1.2□□□□□ -2.22
MSH3YCR092C YKL018C-AQ3E7A7 99 aa1.2□□□□□ -2.22
MSH3YCR092C MSS18P08593 268 aa1.19□□□□□ -2.22
MSH3YCR092C RNA14P25298 677 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C GFD2P25370 566 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C RPC19P28000 142 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C GLC7P32598 312 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C RPS0AP32905 252 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C VPS17P32913 551 aa1.19□□□□□ -2.22
MSH3YCR092C NUF2P33895 451 aa1.19□□□□□ -2.22
MSH3YCR092C TMA19P35691 167 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C MPC2P38857 129 aa1.19□□□□□ -2.22
MSH3YCR092C PSD1P39006 500 aa1.19□□□□□ -2.22
MSH3YCR092C YER079WP40052 210 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C YER084WP40057 128 aa1.19□□□□□ -2.22
MSH3YCR092C BUD8P41698 603 aa1.19□□□□□ -2.22
MSH3YCR092C NOP9P47077 666 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C CWC23P52868 283 aaPredicted RBP1.19□□□□□ -2.22
MSH3YCR092C PXR1P53335 271 aaPredicted RBP1.19□□□□□ -2.22
MSH3YCR092C MPA43P53583 542 aaPredicted RBP1.19□□□□□ -2.22
MSH3YCR092C SED1Q01589 338 aa1.19□□□□□ -2.22
MSH3YCR092C HOF1Q05080 669 aa1.19□□□□□ -2.22
MSH3YCR092C MRX9Q07349 420 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C AIM6Q07716 390 aa1.19□□□□□ -2.22
MSH3YCR092C YEH2Q07950 538 aa1.19□□□□□ -2.22
MSH3YCR092C YLR042CQ07990 161 aa1.19□□□□□ -2.22
MSH3YCR092C RTC5Q12108 567 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C RKI1Q12189 258 aa1.19□□□□□ -2.22
MSH3YCR092C TAF3Q12297 353 aa1.19□□□□□ -2.22
MSH3YCR092C DIF1O13577 133 aa1.19□□□□□ -2.22
MSH3YCR092C SIR3P06701 978 aa1.19□□□□□ -2.22
MSH3YCR092C GPI12P23797 304 aa1.19□□□□□ -2.22
MSH3YCR092C TFC1P32367 649 aa1.19□□□□□ -2.22
MSH3YCR092C TIM12P32830 109 aa1.19□□□□□ -2.22
MSH3YCR092C PAD1P33751 242 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
MSH3YCR092C PRS4P38063 326 aaPredicted RBP1.19□□□□□ -2.22
MSH3YCR092C RTC3P38804 111 aaPredicted RBP1.19□□□□□ -2.22
MSH3YCR092C SMB1P40018 196 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C MRX1P40050 688 aa1.19□□□□□ -2.22
MSH3YCR092C GAT2P40209 560 aa1.19□□□□□ -2.22
MSH3YCR092C RPL10P41805 221 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C PFS2P42841 465 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C AGP3P43548 558 aa1.19□□□□□ -2.22
MSH3YCR092C YGR168CP53293 376 aa1.19□□□□□ -2.22
MSH3YCR092C YGR219WP53307 113 aa1.19□□□□□ -2.22
MSH3YCR092C ARG5,6Q01217 863 aa1.19□□□□□ -2.22
MSH3YCR092C KAP120Q02932 1032 aa1.19□□□□□ -2.22
MSH3YCR092C YMR099CQ03161 297 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C VBA1Q04301 562 aa1.19□□□□□ -2.22
MSH3YCR092C HSP31Q04432 237 aa1.19□□□□□ -2.22
MSH3YCR092C SPG4Q04438 115 aa1.19□□□□□ -2.22
MSH3YCR092C NEJ1Q06148 342 aa1.19□□□□□ -2.22
MSH3YCR092C TPO3Q06451 622 aa1.19□□□□□ -2.22
MSH3YCR092C TSR2Q06672 205 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C APL4Q12028 832 aa1.19□□□□□ -2.22
MSH3YCR092C FRE6Q12473 712 aa1.19□□□□□ -2.22
MSH3YCR092C YBR126W-AQ8TGU7 68 aa1.19□□□□□ -2.22
MSH3YCR092C CHO1P08456 276 aa1.19□□□□□ -2.22
MSH3YCR092C RPL30P14120 105 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C CKA1P15790 372 aa1.19□□□□□ -2.22
MSH3YCR092C GSH1P32477 678 aa1.19□□□□□ -2.22
MSH3YCR092C LTV1P34078 463 aa1.19□□□□□ -2.22
MSH3YCR092C MRP8P35719 219 aa1.19□□□□□ -2.22
MSH3YCR092C NUP120P35729 1037 aa1.19□□□□□ -2.22
MSH3YCR092C YBR138CP38277 524 aa1.19□□□□□ -2.22
MSH3YCR092C GRE3P38715 327 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
MSH3YCR092C ARF3P40994 183 aaRIP-Chip data1.19□□□□□ -2.22not detected
MSH3YCR092C YJL163CP46996 555 aa1.19□□□□□ -2.22
MSH3YCR092C YGL114WP53134 725 aa1.19□□□□□ -2.22
MSH3YCR092C TPC1P53257 314 aa1.19□□□□□ -2.22
MSH3YCR092C SYF2P53277 215 aaPredicted RBP1.19□□□□□ -2.22
MSH3YCR092C TIM13P53299 105 aa1.19□□□□□ -2.22
MSH3YCR092C YNR048WP53740 393 aa1.19□□□□□ -2.22
MSH3YCR092C YNL095CP53932 642 aa1.19□□□□□ -2.22
MSH3YCR092C SNO4Q04902 237 aa1.19□□□□□ -2.22
MSH3YCR092C SGT1Q08446 395 aa1.19□□□□□ -2.22
MSH3YCR092C HSP33Q08914 237 aaKnown RBP1.19□□□□□ -2.22
MSH3YCR092C YPL191CQ08930 360 aa1.19□□□□□ -2.22
MSH3YCR092C HSP32Q08992 237 aa1.19□□□□□ -2.22
MSH3YCR092C YPL162CQ12042 273 aa1.19□□□□□ -2.22
MSH3YCR092C AGC1Q12482 902 aa1.19□□□□□ -2.22
MSH3YCR092C ARG81P05085 880 aa1.18□□□□□ -2.22
MSH3YCR092C PET9P18239 318 aaKnown RBP1.18□□□□□ -2.22
MSH3YCR092C VMA16P23968 213 aa1.18□□□□□ -2.22
MSH3YCR092C PTC6P25646 442 aa1.18□□□□□ -2.22
MSH3YCR092C POP5P28005 173 aa1.18□□□□□ -2.22
MSH3YCR092C ACH1P32316 526 aa1.18□□□□□ -2.22
MSH3YCR092C AFG1P32317 509 aa1.18□□□□□ -2.22
MSH3YCR092C HSP150P32478 413 aa1.18□□□□□ -2.22
MSH3YCR092C DUT1P33317 147 aa1.18□□□□□ -2.22
MSH3YCR092C SRP102P36057 244 aaPredicted RBP1.18□□□□□ -2.22
MSH3YCR092C YPK3P38070 525 aa1.18□□□□□ -2.22
MSH3YCR092C YHR035WP38769 630 aa1.18□□□□□ -2.22
MSH3YCR092C PHB1P40961 287 aa1.18□□□□□ -2.22
MSH3YCR092C TRS85P46944 698 aa1.18□□□□□ -2.22
MSH3YCR092C DUO1P53168 247 aaKnown RBP1.18□□□□□ -2.22
MSH3YCR092C TYW3P53177 273 aa1.18□□□□□ -2.22
MSH3YCR092C MIX17Q03667 156 aa1.18□□□□□ -2.22
MSH3YCR092C EKI1Q03764 534 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms