RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Arhgap30Q640N3 1101 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Sh3rf1Q69ZI1 892 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Btbd10Q80X66 475 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Q8BGD0 127 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 B3glctQ8BHT6 489 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Znf76Q8BMU0 568 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Rpa3Q9CQ71 121 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 TnrQ8BYI9 1358 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 PcQ05920 1178 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 JrkQ60976 557 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 CapslQ6P8Y1 208 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Cfap206Q6PE87 622 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Fam181bQ80VF6 417 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 CenpuQ8C4M7 410 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Trim52Q8CDV4 233 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 HscbQ8K3A0 234 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Mospd1Q8VEL0 213 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Pcdhb5Q91XZ5 792 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Rnf112Q96DY5 654 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Rnf25Q9QZR0 456 aa13.11□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Syngap1F6SEU4 1340 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Itpripl1A2ASA8 547 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 CopeO89079 308 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Gna11P21278 359 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Col6a1Q04857 1025 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Map3k9Q3U1V8 1077 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Dab2ipQ3UHC7 1189 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ints2Q80UK8 1198 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Fsd1lQ8BYN5 507 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Apol7cQ8C6E1 369 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Epn2Q8CHU3 595 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Arfip2Q8K221 341 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ggt7Q99JP7 662 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Zfyve9A2A8R0 1397 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Msh3P13705 1091 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Elk4P41158 430 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Zdhhc18Q5Y5T2 380 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 IrgcQ8C262 412 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 GanQ8CA72 597 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 SltmQ8CH25 1031 aaKnown RBP13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 HyiQ8R1F5 277 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Hdac9Q99N13 588 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Llcfc1Q9D9P8 108 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Trem1Q9JKE2 230 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ccnt1Q9QWV9 724 aaKnown RBP13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Angptl2Q9R045 493 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Cetn2Q9R1K9 172 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Trip6Q9Z1Y4 480 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ahnak2E9PYB0 1738 aaKnown RBP13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Kif6E9PX57 802 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Tlr8P58682 1032 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Fam129aQ3UW53 926 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Tor4aQ8BH02 426 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Vps37bQ8R0J7 285 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Paip2bQ91W45 136 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ascc2Q91WR3 749 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Kremen1Q99N43 473 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Nsmce3Q9CPR8 279 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Arpc5lQ9D898 153 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ap2b1Q9DBG3 937 aa13.1□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Myh2G3UW82 1942 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ttc7bE9Q6P5 843 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ripk2P58801 539 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Adrbk2Q3UYH7 688 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Mthfd1lQ3V3R1 977 aaKnown RBP13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Orai3Q6P8G8 290 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Kcnk18Q6VV64 394 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Mfn1Q811U4 741 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 LRWD1Q8BUI3 648 aaKnown RBP13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Trim35Q8C006 501 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Tph2Q8CGV2 488 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Tmod2Q9JKK7 351 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Dlc1Q9R0Z9 1092 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Nme9A0A1L1SUL6 329 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Rfx8D3YU81 596 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Gm4340L7N2C4 268 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Myo19Q5SV80 963 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Arid3aQ62431 601 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Plekhg2Q6KAU7 1340 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 CrebzfQ91ZR3 358 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ppp1r3aQ99MR9 1089 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Arl8bQ9CQW2 186 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Lrp2bpQ9D4C6 346 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Klrc2Q9WTJ9 238 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Usp51B1AY15 661 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Cdk7Q03147 346 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Znf367Q0VDT2 340 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Ppp1r14bQ62084 147 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Crybg3Q80W49 1005 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Dennd2aQ8C4S8 1000 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 Stoml1Q8CI66 399 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 CbsQ91WT9 561 aa13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 PygmQ9WUB3 842 aaKnown RBP13.09□□□□□ -0.31
Pcdh1-202ENSMUST00000159405 IqccA2ADZ8 418 aa13.08□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Foxm1O08696 760 aa13.08□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 LdhaP06151 332 aaKnown RBP13.08□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Kcna1P16388 495 aa13.08□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Rbm46P86049 533 aa13.08□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Pih1d3Q3KNI6 218 aa13.08□□□□□ -0.32
Pcdh1-202ENSMUST00000159405 Ugt1a9Q62452 528 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms