Protein–RNA interactions for Protein: Q3V3R1

Mthfd1l, Monofunctional C1-tetrahydrofolate synthase, mitochondrial, mousemouse

Known RBP Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mthfd1lQ3V3R1 Gm25239-201ENSMUST00000174915 86 ntBASIC36.27■■■■□ 3.4
Mthfd1lQ3V3R1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
Mthfd1lQ3V3R1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Mthfd1lQ3V3R1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Mthfd1lQ3V3R1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Mthfd1lQ3V3R1 Gm15042-201ENSMUST00000120212 883 ntBASIC32.04■■■□□ 2.72
Mthfd1lQ3V3R1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
Mthfd1lQ3V3R1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Mthfd1lQ3V3R1 Gm15045-201ENSMUST00000117359 883 ntBASIC31.36■■■□□ 2.61
Mthfd1lQ3V3R1 Gm24109-201ENSMUST00000175489 103 ntBASIC31.25■■■□□ 2.59
Mthfd1lQ3V3R1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Mthfd1lQ3V3R1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Mthfd1lQ3V3R1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Mthfd1lQ3V3R1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Mthfd1lQ3V3R1 Psd-208ENSMUST00000224556 2034 ntBASIC30.57■■■□□ 2.48
Mthfd1lQ3V3R1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.38■■■□□ 2.45
Mthfd1lQ3V3R1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Mthfd1lQ3V3R1 Gm23366-201ENSMUST00000175022 89 ntBASIC30.36■■■□□ 2.45
Mthfd1lQ3V3R1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Mthfd1lQ3V3R1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Mthfd1lQ3V3R1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Mthfd1lQ3V3R1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Mthfd1lQ3V3R1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Mthfd1lQ3V3R1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Mthfd1lQ3V3R1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Mthfd1lQ3V3R1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Mthfd1lQ3V3R1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Mthfd1lQ3V3R1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Mthfd1lQ3V3R1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.64■■■□□ 2.34
Mthfd1lQ3V3R1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Mthfd1lQ3V3R1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
Mthfd1lQ3V3R1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Mthfd1lQ3V3R1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.41■■■□□ 2.3
Mthfd1lQ3V3R1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.26■■■□□ 2.27
Mthfd1lQ3V3R1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Mthfd1lQ3V3R1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Mthfd1lQ3V3R1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Mthfd1lQ3V3R1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Mthfd1lQ3V3R1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Mthfd1lQ3V3R1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.9■■■□□ 2.22
Mthfd1lQ3V3R1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Mthfd1lQ3V3R1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Mthfd1lQ3V3R1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.75■■■□□ 2.19
Mthfd1lQ3V3R1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Mthfd1lQ3V3R1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
Mthfd1lQ3V3R1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Mthfd1lQ3V3R1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Mthfd1lQ3V3R1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Mthfd1lQ3V3R1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Mthfd1lQ3V3R1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Mthfd1lQ3V3R1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Mthfd1lQ3V3R1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.5■■■□□ 2.15
Mthfd1lQ3V3R1 Gm25238-201ENSMUST00000174914 89 ntBASIC28.5■■■□□ 2.15
Mthfd1lQ3V3R1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Mthfd1lQ3V3R1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.42■■■□□ 2.14
Mthfd1lQ3V3R1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Mthfd1lQ3V3R1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Mthfd1lQ3V3R1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Mthfd1lQ3V3R1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Mthfd1lQ3V3R1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Mthfd1lQ3V3R1 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.24■■■□□ 2.11
Mthfd1lQ3V3R1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Mthfd1lQ3V3R1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Mthfd1lQ3V3R1 Gm27325-201ENSMUST00000175467 74 ntBASIC28.14■■■□□ 2.1
Mthfd1lQ3V3R1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Mthfd1lQ3V3R1 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.08■■■□□ 2.09
Mthfd1lQ3V3R1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.07■■■□□ 2.08
Mthfd1lQ3V3R1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Mthfd1lQ3V3R1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Mthfd1lQ3V3R1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.02■■■□□ 2.08
Mthfd1lQ3V3R1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Mthfd1lQ3V3R1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.98■■■□□ 2.07
Mthfd1lQ3V3R1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Mthfd1lQ3V3R1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.92■■■□□ 2.06
Mthfd1lQ3V3R1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Mthfd1lQ3V3R1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Mthfd1lQ3V3R1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Mthfd1lQ3V3R1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.79■■■□□ 2.04
Mthfd1lQ3V3R1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Mthfd1lQ3V3R1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.76■■■□□ 2.04
Mthfd1lQ3V3R1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Mthfd1lQ3V3R1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.74■■■□□ 2.03
Mthfd1lQ3V3R1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Mthfd1lQ3V3R1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.71■■■□□ 2.03
Mthfd1lQ3V3R1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Mthfd1lQ3V3R1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Mthfd1lQ3V3R1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Mthfd1lQ3V3R1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.52■■■□□ 2
Mthfd1lQ3V3R1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.47■■□□□ 1.99
Mthfd1lQ3V3R1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Mthfd1lQ3V3R1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.43■■□□□ 1.98
Mthfd1lQ3V3R1 Rab21-202ENSMUST00000218831 843 ntBASIC27.42■■□□□ 1.98
Mthfd1lQ3V3R1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Mthfd1lQ3V3R1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
Mthfd1lQ3V3R1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Mthfd1lQ3V3R1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Mthfd1lQ3V3R1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.29■■□□□ 1.96
Mthfd1lQ3V3R1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
Mthfd1lQ3V3R1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Mthfd1lQ3V3R1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 128 ms