RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 YNR068CP53754 272 aa-0.08□□□□□ -2.42
snR55snR55 UTP6Q02354 440 aaKnown RBP-0.08□□□□□ -2.42
snR55snR55 YPL039WQ03080 316 aa-0.08□□□□□ -2.42
snR55snR55 ECM18Q04623 453 aa-0.08□□□□□ -2.42
snR55snR55 BUR2Q05949 395 aa-0.08□□□□□ -2.42
snR55snR55 RBK1P25332 333 aa-0.09□□□□□ -2.42
snR55snR55 KRE29P40026 464 aa-0.09□□□□□ -2.42
snR55snR55 YMR310CQ04867 317 aaPredicted RBP-0.09□□□□□ -2.42
snR55snR55 DCN1Q12395 269 aa-0.09□□□□□ -2.42
snR55snR55 CYR1P08678 2026 aaKnown RBP-0.09□□□□□ -2.42
snR55snR55 FAA1P30624 700 aaKnown RBP-0.1□□□□□ -2.43
snR55snR55 RPE1P46969 238 aa-0.1□□□□□ -2.43
snR55snR55 SNX4P47057 423 aa-0.1□□□□□ -2.43
snR55snR55 TAF6P53040 516 aa-0.1□□□□□ -2.43
snR55snR55 PEX12Q04370 399 aa-0.1□□□□□ -2.43
snR55snR55 YBR219CP38317 127 aa-0.11□□□□□ -2.43
snR55snR55 SHC1P39000 512 aa-0.11□□□□□ -2.43
snR55snR55 BTT1P40314 149 aaPredicted RBP-0.11□□□□□ -2.43
snR55snR55 SNX41Q04053 625 aa-0.11□□□□□ -2.43
snR55snR55 CSI2Q08054 341 aa-0.11□□□□□ -2.43
snR55snR55 FKS1P38631 1876 aaKnown RBP-0.12□□□□□ -2.43
snR55snR55 YEL009C-AA0A023PZF2 135 aa-0.12□□□□□ -2.43
snR55snR55 VAR1P02381 398 aa-0.12□□□□□ -2.43
snR55snR55 SCL1P21243 252 aaKnown RBP-0.12□□□□□ -2.43
snR55snR55 UBA1P22515 1024 aaKnown RBP-0.12□□□□□ -2.43
snR55snR55 IFM1P25038 676 aa-0.12□□□□□ -2.43
snR55snR55 PUP2P32379 260 aa-0.12□□□□□ -2.43
snR55snR55 MCH2P36032 473 aa-0.12□□□□□ -2.43
snR55snR55 AVT7P40501 490 aa-0.12□□□□□ -2.43
snR55snR55 HSP82P02829 709 aaKnown RBP-0.13□□□□□ -2.43
snR55snR55 BMH1P29311 267 aaKnown RBP-0.13□□□□□ -2.43
snR55snR55 MDL1P33310 695 aa-0.13□□□□□ -2.43
snR55snR55 GDH2P33327 1092 aaKnown RBP-0.13□□□□□ -2.43
snR55snR55 YPC1P38298 316 aa-0.13□□□□□ -2.43
snR55snR55 YHB1P39676 399 aaKnown RBP-0.13□□□□□ -2.43
snR55snR55 SHQ1P40486 507 aaPredicted RBP-0.13□□□□□ -2.43
snR55snR55 BMT5P40493 336 aa-0.13□□□□□ -2.43
snR55snR55 BUD21Q08492 214 aaPredicted RBP-0.13□□□□□ -2.43
snR55snR55 RGS2Q99188 309 aa-0.13□□□□□ -2.43
snR55snR55 YLL053CP0CD98 152 aa-0.14□□□□□ -2.43
snR55snR55 DSF1P0CX08 502 aa-0.14□□□□□ -2.43
snR55snR55 YNR073CP0CX09 502 aa-0.14□□□□□ -2.43
snR55snR55 FBA1P14540 359 aaKnown RBP-0.14□□□□□ -2.43
snR55snR55 RDS1P25611 832 aa-0.14□□□□□ -2.43
snR55snR55 ERG2P32352 222 aa-0.14□□□□□ -2.43
snR55snR55 IMP3P32899 183 aaPredicted RBP-0.14□□□□□ -2.43
snR55snR55 PXA2P34230 853 aa-0.14□□□□□ -2.43
snR55snR55 JNM1P36224 373 aa-0.14□□□□□ -2.43
snR55snR55 TCD1P38756 429 aa-0.14□□□□□ -2.43
snR55snR55 CAJ1P39101 391 aa-0.14□□□□□ -2.43
snR55snR55 AIM36Q03798 255 aa-0.14□□□□□ -2.43
snR55snR55 MDH2P22133 377 aa-0.15□□□□□ -2.43
snR55snR55 ACB1P31787 87 aa-0.15□□□□□ -2.43
snR55snR55 COT1P32798 439 aa-0.15□□□□□ -2.43
snR55snR55 UPS2P35200 230 aa-0.15□□□□□ -2.43
snR55snR55 POP8P38208 133 aa-0.15□□□□□ -2.43
snR55snR55 YSW1P38280 609 aa-0.15□□□□□ -2.43
snR55snR55 PHO89P38361 574 aa-0.15□□□□□ -2.43
snR55snR55 KEL2P50090 882 aa-0.15□□□□□ -2.43
snR55snR55 IRC4Q03036 179 aa-0.15□□□□□ -2.43
snR55snR55 YLR162WQ06235 118 aa-0.15□□□□□ -2.43
snR55snR55 UTP23Q12339 254 aaKnown RBP-0.15□□□□□ -2.43
snR55snR55 SPO24Q3E752 67 aa-0.15□□□□□ -2.43
snR55snR55 VMA2P16140 517 aaKnown RBP-0.16□□□□□ -2.44
snR55snR55 PPH21P23594 369 aa-0.16□□□□□ -2.44
snR55snR55 DPB2P24482 689 aaPredicted RBP-0.16□□□□□ -2.44
snR55snR55 PEX4P29340 183 aa-0.16□□□□□ -2.44
snR55snR55 ARN2P38724 620 aa-0.16□□□□□ -2.44
snR55snR55 SPT8P38915 602 aa-0.16□□□□□ -2.44
snR55snR55 ALP1P38971 573 aa-0.16□□□□□ -2.44
snR55snR55 SEN34P39707 275 aa-0.16□□□□□ -2.44
snR55snR55 YJL055WP47044 245 aa-0.16□□□□□ -2.44
snR55snR55 UBC13P52490 153 aa-0.16□□□□□ -2.44
snR55snR55 RVB1Q03940 463 aaKnown RBP-0.16□□□□□ -2.44
snR55snR55 SPC19Q03954 165 aa-0.16□□□□□ -2.44
snR55snR55 CTR3Q06686 241 aa-0.16□□□□□ -2.44
snR55snR55 RIO1Q12196 484 aaKnown RBP-0.16□□□□□ -2.44
snR55snR55 MHT1Q12525 324 aa-0.16□□□□□ -2.44
snR55snR55 TFB5Q3E7C1 72 aaPredicted RBP-0.16□□□□□ -2.44
snR55snR55 CPA1P07258 411 aaKnown RBP-0.17□□□□□ -2.44
snR55snR55 CCA1P21269 546 aa-0.17□□□□□ -2.44
snR55snR55 VPH1P32563 840 aaKnown RBP-0.17□□□□□ -2.44
snR55snR55 CSG2P35206 410 aa-0.17□□□□□ -2.44
snR55snR55 DRE2P36152 348 aa-0.17□□□□□ -2.44
snR55snR55 PRP39P39682 629 aaKnown RBP-0.17□□□□□ -2.44
snR55snR55 AVT2P39981 480 aa-0.17□□□□□ -2.44
snR55snR55 TAD2P47058 250 aa-0.17□□□□□ -2.44
snR55snR55 MDM34P53083 459 aa-0.17□□□□□ -2.44
snR55snR55 GEP5Q12393 293 aa-0.17□□□□□ -2.44
snR55snR55 SMC6Q12749 1114 aa-0.17□□□□□ -2.44
snR55snR55 VMA5P31412 392 aaKnown RBP-0.18□□□□□ -2.44
snR55snR55 AEP1P32493 518 aa-0.18□□□□□ -2.44
snR55snR55 SIF2P38262 535 aa-0.18□□□□□ -2.44
snR55snR55 YHR035WP38769 630 aa-0.18□□□□□ -2.44
snR55snR55 DOG1P38774 246 aa-0.18□□□□□ -2.44
snR55snR55 RPL13BP40212 199 aaKnown RBP-0.18□□□□□ -2.44
snR55snR55 CYT2Q00873 224 aa-0.18□□□□□ -2.44
snR55snR55 PAR32Q12515 295 aaKnown RBP-0.18□□□□□ -2.44
snR55snR55 RPL13AQ12690 199 aaPredicted RBP-0.18□□□□□ -2.44
snR55snR55 SAS5Q99314 248 aa-0.18□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 53 ms