RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W YBR062CP38239 180 aa0.55□□□□□ -2.32
SGF11YPL047W KRE29P40026 464 aa0.55□□□□□ -2.32
SGF11YPL047W YER135CP40082 130 aa0.55□□□□□ -2.32
SGF11YPL047W JEM1P40358 645 aa0.55□□□□□ -2.32
SGF11YPL047W SHQ1P40486 507 aaPredicted RBP0.55□□□□□ -2.32
SGF11YPL047W YPT32P51996 222 aaKnown RBP0.55□□□□□ -2.32
SGF11YPL047W UBC13P52490 153 aa0.55□□□□□ -2.32
SGF11YPL047W OKP1P53298 406 aa0.55□□□□□ -2.32
SGF11YPL047W DAD3P69850 94 aa0.55□□□□□ -2.32
SGF11YPL047W DBP9Q06218 594 aaKnown RBP0.55□□□□□ -2.32
SGF11YPL047W YLL007CQ07799 665 aa0.55□□□□□ -2.32
SGF11YPL047W YPL278CQ08990 100 aa0.55□□□□□ -2.32
SGF11YPL047W UTP23Q12339 254 aaKnown RBP0.55□□□□□ -2.32
SGF11YPL047W ISD11Q6Q560 94 aa0.55□□□□□ -2.32
SGF11YPL047W STE3P06783 470 aa0.54□□□□□ -2.32
SGF11YPL047W RNR2P09938 399 aaKnown RBP0.54□□□□□ -2.32
SGF11YPL047W MSS116P15424 664 aaKnown RBP0.54□□□□□ -2.32
SGF11YPL047W YCR102CP25608 368 aa0.54□□□□□ -2.32
SGF11YPL047W IMP1P28627 190 aa0.54□□□□□ -2.32
SGF11YPL047W BMH1P29311 267 aaKnown RBP0.54□□□□□ -2.32
SGF11YPL047W SCM4P32564 187 aa0.54□□□□□ -2.32
SGF11YPL047W SKI2P35207 1287 aaKnown RBP RIP-Chip data0.54□□□□□ -2.32not detected
SGF11YPL047W SPT8P38915 602 aa0.54□□□□□ -2.32
SGF11YPL047W YIL012WP40551 113 aa0.54□□□□□ -2.32
SGF11YPL047W YGL114WP53134 725 aa0.54□□□□□ -2.32
SGF11YPL047W YNL146WP53906 100 aa0.54□□□□□ -2.32
SGF11YPL047W STE23Q06010 1027 aa0.54□□□□□ -2.32
SGF11YPL047W SMT3Q12306 101 aaKnown RBP0.54□□□□□ -2.32
SGF11YPL047W ERG2P32352 222 aa0.53□□□□□ -2.32
SGF11YPL047W KRE6P32486 720 aa0.53□□□□□ -2.32
SGF11YPL047W YPC1P38298 316 aa0.53□□□□□ -2.32
SGF11YPL047W LIN1P38852 340 aaPredicted RBP0.53□□□□□ -2.32
SGF11YPL047W LSM4P40070 187 aaKnown RBP0.53□□□□□ -2.32
SGF11YPL047W SWC4P53201 476 aa0.53□□□□□ -2.32
SGF11YPL047W SWT21P53873 357 aaPredicted RBP0.53□□□□□ -2.32
SGF11YPL047W SPO24Q3E752 67 aa0.53□□□□□ -2.32
SGF11YPL047W NUP157P40064 1391 aaKnown RBP0.53□□□□□ -2.32
SGF11YPL047W YEL009C-AA0A023PZF2 135 aa0.52□□□□□ -2.33
SGF11YPL047W CDC7P06243 507 aa0.52□□□□□ -2.33
SGF11YPL047W RAD10P06838 210 aa0.52□□□□□ -2.33
SGF11YPL047W TAL1P15019 335 aaKnown RBP0.52□□□□□ -2.33
SGF11YPL047W ZRT1P32804 376 aa0.52□□□□□ -2.33
SGF11YPL047W SFC1P33303 322 aa0.52□□□□□ -2.33
SGF11YPL047W YDR089WP38966 869 aa0.52□□□□□ -2.33
SGF11YPL047W RPE1P46969 238 aa0.52□□□□□ -2.33
SGF11YPL047W YJL118WP47022 219 aa0.52□□□□□ -2.33
SGF11YPL047W RSC1P53236 928 aa0.52□□□□□ -2.33
SGF11YPL047W YGR168CP53293 376 aa0.52□□□□□ -2.33
SGF11YPL047W MRS2Q01926 470 aa0.52□□□□□ -2.33
SGF11YPL047W MZM1Q03429 123 aaPredicted RBP0.52□□□□□ -2.33
SGF11YPL047W YML018CQ03730 393 aa0.52□□□□□ -2.33
SGF11YPL047W YMR114CQ04471 368 aaKnown RBP0.52□□□□□ -2.33
SGF11YPL047W INM2Q05533 292 aa0.52□□□□□ -2.33
SGF11YPL047W YPL247CQ12523 523 aa0.52□□□□□ -2.33
SGF11YPL047W YBL112CQ3E7Y4 105 aa0.52□□□□□ -2.33
SGF11YPL047W IZH4Q99393 312 aa0.52□□□□□ -2.33
SGF11YPL047W PAN1P32521 1480 aa0.52□□□□□ -2.33
SGF11YPL047W RPL31AP0C2H8 113 aaKnown RBP0.51□□□□□ -2.33
SGF11YPL047W RPL18AP0CX49 186 aaKnown RBP0.51□□□□□ -2.33
SGF11YPL047W RPL18BP0CX50 186 aaKnown RBP0.51□□□□□ -2.33
SGF11YPL047W POX1P13711 748 aa0.51□□□□□ -2.33
SGF11YPL047W CCA1P21269 546 aa0.51□□□□□ -2.33
SGF11YPL047W PPH21P23594 369 aa0.51□□□□□ -2.33
SGF11YPL047W DOA4P32571 926 aa0.51□□□□□ -2.33
SGF11YPL047W SUA5P32579 426 aa0.51□□□□□ -2.33
SGF11YPL047W CAT2P32796 670 aaKnown RBP0.51□□□□□ -2.33
SGF11YPL047W COT1P32798 439 aa0.51□□□□□ -2.33
SGF11YPL047W GDH2P33327 1092 aaKnown RBP0.51□□□□□ -2.33
SGF11YPL047W YKL162CP36052 402 aa0.51□□□□□ -2.33
SGF11YPL047W POP8P38208 133 aa0.51□□□□□ -2.33
SGF11YPL047W RXT2P38255 430 aa0.51□□□□□ -2.33
SGF11YPL047W PHO89P38361 574 aa0.51□□□□□ -2.33
SGF11YPL047W AVT7P40501 490 aa0.51□□□□□ -2.33
SGF11YPL047W GDS1P41913 522 aa0.51□□□□□ -2.33
SGF11YPL047W ASI3P53983 676 aa0.51□□□□□ -2.33
SGF11YPL047W YPL039WQ03080 316 aa0.51□□□□□ -2.33
SGF11YPL047W PEX12Q04370 399 aa0.51□□□□□ -2.33
SGF11YPL047W ECM18Q04623 453 aa0.51□□□□□ -2.33
SGF11YPL047W BUR2Q05949 395 aa0.51□□□□□ -2.33
SGF11YPL047W APC9Q12107 265 aa0.51□□□□□ -2.33
SGF11YPL047W FRE6Q12473 712 aa0.51□□□□□ -2.33
SGF11YPL047W RAD3P06839 778 aa0.5□□□□□ -2.33
SGF11YPL047W PUT1P09368 476 aa0.5□□□□□ -2.33
SGF11YPL047W POT1P27796 417 aaKnown RBP RIP-Chip data0.5□□□□□ -2.33not detected
SGF11YPL047W CSG2P35206 410 aa0.5□□□□□ -2.33
SGF11YPL047W SIF2P38262 535 aa0.5□□□□□ -2.33
SGF11YPL047W DOG1P38774 246 aa0.5□□□□□ -2.33
SGF11YPL047W TEM1P38987 245 aa0.5□□□□□ -2.33
SGF11YPL047W PEP8P40335 379 aa0.5□□□□□ -2.33
SGF11YPL047W CDC40P40968 455 aaPredicted RBP0.5□□□□□ -2.33
SGF11YPL047W PDR16P53860 351 aaKnown RBP0.5□□□□□ -2.33
SGF11YPL047W YPL077CQ02831 240 aa0.5□□□□□ -2.33
SGF11YPL047W YPR064WQ12492 139 aa0.5□□□□□ -2.33
SGF11YPL047W SGA1P08019 549 aa0.49□□□□□ -2.33
SGF11YPL047W COS2P0CX12 379 aa0.49□□□□□ -2.33
SGF11YPL047W COS3P0CX13 379 aa0.49□□□□□ -2.33
SGF11YPL047W GAL3P13045 520 aa0.49□□□□□ -2.33
SGF11YPL047W DPB2P24482 689 aaPredicted RBP0.49□□□□□ -2.33
SGF11YPL047W LAS1P36146 502 aaPredicted RBP0.49□□□□□ -2.33
SGF11YPL047W HMT1P38074 348 aa0.49□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms