RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W MIM1Q08176 113 aa3.85□□□□□ -1.79
SIR1YKR101W NUP2P32499 720 aa3.84□□□□□ -1.79
SIR1YKR101W DOA4P32571 926 aa3.84□□□□□ -1.79
SIR1YKR101W KTI12P34253 313 aaKnown RBP3.84□□□□□ -1.79
SIR1YKR101W PRS4P38063 326 aaPredicted RBP3.84□□□□□ -1.79
SIR1YKR101W YER186CP40101 306 aa3.84□□□□□ -1.79
SIR1YKR101W YGL260WP53056 76 aa3.84□□□□□ -1.79
SIR1YKR101W SKI8Q02793 397 aaPredicted RBP3.84□□□□□ -1.79
SIR1YKR101W CTA1P15202 515 aa3.83□□□□□ -1.8
SIR1YKR101W ERD1P16151 362 aa3.83□□□□□ -1.8
SIR1YKR101W GIT1P25346 518 aa3.83□□□□□ -1.8
SIR1YKR101W SUA5P32579 426 aa3.83□□□□□ -1.8
SIR1YKR101W YKT6P36015 200 aaKnown RBP3.83□□□□□ -1.8
SIR1YKR101W YBR062CP38239 180 aa3.83□□□□□ -1.8
SIR1YKR101W FMC1P40491 155 aa3.83□□□□□ -1.8
SIR1YKR101W YJR054WP47114 497 aa3.83□□□□□ -1.8
SIR1YKR101W SWC4P53201 476 aa3.83□□□□□ -1.8
SIR1YKR101W CPD1P53314 239 aa3.83□□□□□ -1.8
SIR1YKR101W RSA1Q08932 381 aa3.83□□□□□ -1.8
SIR1YKR101W PLP2Q12017 286 aa3.83□□□□□ -1.8
SIR1YKR101W ILV1P00927 576 aaKnown RBP3.83□□□□□ -1.8
SIR1YKR101W RPP0P05317 312 aaKnown RBP3.83□□□□□ -1.8
SIR1YKR101W TFS1P14306 219 aa3.83□□□□□ -1.8
SIR1YKR101W OXA1P39952 402 aa3.83□□□□□ -1.8
SIR1YKR101W YAT2P40017 923 aa3.83□□□□□ -1.8
SIR1YKR101W NBP1P52919 319 aaPredicted RBP3.83□□□□□ -1.8
SIR1YKR101W MYO5Q04439 1219 aaKnown RBP3.83□□□□□ -1.8
SIR1YKR101W IRC25Q07951 179 aa3.83□□□□□ -1.8
SIR1YKR101W VPS1P21576 704 aaKnown RBP3.82□□□□□ -1.8
SIR1YKR101W POF1P25576 258 aa3.82□□□□□ -1.8
SIR1YKR101W YCR016WP25617 290 aaKnown RBP3.82□□□□□ -1.8
SIR1YKR101W ARO2P28777 376 aaKnown RBP3.82□□□□□ -1.8
SIR1YKR101W SPT4P32914 102 aaPredicted RBP3.82□□□□□ -1.8
SIR1YKR101W AIM10P39965 576 aaKnown RBP3.82□□□□□ -1.8
SIR1YKR101W MSS2P40990 351 aa3.82□□□□□ -1.8
SIR1YKR101W ALG11P53954 548 aaKnown RBP3.82□□□□□ -1.8
SIR1YKR101W SLT2Q00772 484 aa3.82□□□□□ -1.8
SIR1YKR101W YLR446WQ06204 433 aa3.82□□□□□ -1.8
SIR1YKR101W YLR177WQ06251 628 aa3.82□□□□□ -1.8
SIR1YKR101W MSH5Q12175 901 aa3.82□□□□□ -1.8
SIR1YKR101W HMS1Q12398 434 aa3.82□□□□□ -1.8
SIR1YKR101W RPO41P13433 1351 aaKnown RBP3.82□□□□□ -1.8
SIR1YKR101W MATALPHA1P0CY06 175 aa3.82□□□□□ -1.8
SIR1YKR101W HMLALPHA1P0CY07 175 aa3.82□□□□□ -1.8
SIR1YKR101W DAL82P21705 255 aa3.82□□□□□ -1.8
SIR1YKR101W INO2P26798 304 aa3.82□□□□□ -1.8
SIR1YKR101W LDS1P31379 325 aa3.82□□□□□ -1.8
SIR1YKR101W MRPL10P36520 322 aa3.82□□□□□ -1.8
SIR1YKR101W TDA11P38854 504 aa3.82□□□□□ -1.8
SIR1YKR101W PFS1P38872 237 aa3.82□□□□□ -1.8
SIR1YKR101W NPT1P39683 429 aaKnown RBP3.82□□□□□ -1.8
SIR1YKR101W YET2Q04210 160 aa3.82□□□□□ -1.8
SIR1YKR101W ADH6Q04894 360 aaKnown RBP3.82□□□□□ -1.8
SIR1YKR101W PAM18Q07914 168 aa3.82□□□□□ -1.8
SIR1YKR101W GIS3Q12418 502 aa3.82□□□□□ -1.8
SIR1YKR101W YPR064WQ12492 139 aa3.82□□□□□ -1.8
SIR1YKR101W AUS1Q08409 1394 aa3.81□□□□□ -1.8
SIR1YKR101W DEP1P31385 405 aa3.81□□□□□ -1.8
SIR1YKR101W KRE6P32486 720 aa3.81□□□□□ -1.8
SIR1YKR101W CBF5P33322 483 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
SIR1YKR101W ATG12P38316 186 aa3.81□□□□□ -1.8
SIR1YKR101W TIM17P39515 158 aa3.81□□□□□ -1.8
SIR1YKR101W MIG3P39943 394 aa3.81□□□□□ -1.8
SIR1YKR101W YGR015CP53208 328 aa3.81□□□□□ -1.8
SIR1YKR101W RRP5Q05022 1729 aaKnown RBP3.81□□□□□ -1.8
SIR1YKR101W TDH2P00358 332 aaKnown RBP3.8□□□□□ -1.8
SIR1YKR101W OSM1P21375 501 aaKnown RBP3.8□□□□□ -1.8
SIR1YKR101W MRPL20P22354 195 aaPredicted RBP3.8□□□□□ -1.8
SIR1YKR101W PRR1P28708 518 aa3.8□□□□□ -1.8
SIR1YKR101W URA10P30402 227 aa3.8□□□□□ -1.8
SIR1YKR101W CYM1P32898 989 aa3.8□□□□□ -1.8
SIR1YKR101W BMH2P34730 273 aaKnown RBP3.8□□□□□ -1.8
SIR1YKR101W SWD3P38123 315 aa3.8□□□□□ -1.8
SIR1YKR101W YPT32P51996 222 aaKnown RBP3.8□□□□□ -1.8
SIR1YKR101W TLG1Q03322 224 aa3.8□□□□□ -1.8
SIR1YKR101W ENT5Q03769 411 aaKnown RBP3.8□□□□□ -1.8
SIR1YKR101W INP2Q03824 705 aa3.8□□□□□ -1.8
SIR1YKR101W PEX30Q06169 523 aa3.8□□□□□ -1.8
SIR1YKR101W YOR114WQ12219 294 aa3.8□□□□□ -1.8
SIR1YKR101W SIR4P11978 1358 aa3.8□□□□□ -1.8
SIR1YKR101W HIS1P00498 297 aaKnown RBP3.8□□□□□ -1.8
SIR1YKR101W RPB4P20433 221 aaPredicted RBP3.8□□□□□ -1.8
SIR1YKR101W CMK2P22517 447 aa3.8□□□□□ -1.8
SIR1YKR101W RPS5P26783 225 aaKnown RBP3.8□□□□□ -1.8
SIR1YKR101W GPX1P36014 167 aa3.8□□□□□ -1.8
SIR1YKR101W SHE1P38200 338 aa3.8□□□□□ -1.8
SIR1YKR101W LDB7P38210 180 aa3.8□□□□□ -1.8
SIR1YKR101W YIA6P40556 373 aa3.8□□□□□ -1.8
SIR1YKR101W OTU1P43558 301 aa3.8□□□□□ -1.8
SIR1YKR101W TAD2P47058 250 aa3.8□□□□□ -1.8
SIR1YKR101W TPN1P53099 579 aa3.8□□□□□ -1.8
SIR1YKR101W YLR283WQ05867 314 aa3.8□□□□□ -1.8
SIR1YKR101W ADF1Q2V2Q1 113 aa3.8□□□□□ -1.8
SIR1YKR101W AAT2P23542 418 aaKnown RBP3.79□□□□□ -1.8
SIR1YKR101W CSE1P33307 960 aa3.79□□□□□ -1.8
SIR1YKR101W YKL187CP34231 750 aa3.79□□□□□ -1.8
SIR1YKR101W DDI1P40087 428 aa3.79□□□□□ -1.8
SIR1YKR101W PEX31P53203 462 aa3.79□□□□□ -1.8
SIR1YKR101W TPS1Q00764 495 aaKnown RBP3.79□□□□□ -1.8
SIR1YKR101W GMC1Q04399 608 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms