RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C SIP18P50263 79 aa8.91□□□□□ -0.98
SHB17YKR043C TNA1P53322 534 aa8.91□□□□□ -0.98
SHB17YKR043C ASI3P53983 676 aa8.91□□□□□ -0.98
SHB17YKR043C PET191Q02772 108 aa8.91□□□□□ -0.98
SHB17YKR043C YDR387CQ04162 555 aa8.91□□□□□ -0.98
SHB17YKR043C ARP10Q04549 284 aa8.91□□□□□ -0.98
SHB17YKR043C AIM6Q07716 390 aa8.91□□□□□ -0.98
SHB17YKR043C TRM10Q12400 293 aa8.91□□□□□ -0.98
SHB17YKR043C IZH2Q12442 317 aa8.91□□□□□ -0.98
SHB17YKR043C MED11Q99278 115 aa8.91□□□□□ -0.98
SHB17YKR043C BLM10P43583 2143 aa8.9□□□□□ -0.98
SHB17YKR043C FUN19P28003 413 aaPredicted RBP8.9□□□□□ -0.98
SHB17YKR043C RPC34P32910 317 aa8.9□□□□□ -0.98
SHB17YKR043C ECT1P33412 323 aa8.9□□□□□ -0.98
SHB17YKR043C SHE1P38200 338 aa8.9□□□□□ -0.98
SHB17YKR043C PFS2P42841 465 aaKnown RBP8.9□□□□□ -0.98
SHB17YKR043C AIM36Q03798 255 aa8.9□□□□□ -0.98
SHB17YKR043C NNT1Q05874 261 aa8.9□□□□□ -0.98
SHB17YKR043C GSH2Q08220 491 aa8.9□□□□□ -0.98
SHB17YKR043C RKM1Q08961 583 aaPredicted RBP8.9□□□□□ -0.98
SHB17YKR043C MCT1Q12283 360 aa8.9□□□□□ -0.98
SHB17YKR043C CDC39P25655 2108 aaKnown RBP8.9□□□□□ -0.99
SHB17YKR043C SEC16P48415 2195 aaKnown RBP8.89□□□□□ -0.99
SHB17YKR043C RPL35AP0CX84 120 aaKnown RBP8.89□□□□□ -0.99
SHB17YKR043C RPL35BP0CX85 120 aaKnown RBP8.89□□□□□ -0.99
SHB17YKR043C PCL1P24867 279 aa8.89□□□□□ -0.99
SHB17YKR043C BAP2P38084 609 aa8.89□□□□□ -0.99
SHB17YKR043C YBR096WP38256 230 aa8.89□□□□□ -0.99
SHB17YKR043C YBR220CP38318 560 aa8.89□□□□□ -0.99
SHB17YKR043C PRS3P38689 320 aaKnown RBP8.89□□□□□ -0.99
SHB17YKR043C RMD9P53140 646 aaKnown RBP8.89□□□□□ -0.99
SHB17YKR043C SAY1P53324 424 aa8.89□□□□□ -0.99
SHB17YKR043C MRX8Q05473 314 aa8.89□□□□□ -0.99
SHB17YKR043C SCEIP03882 235 aa8.88□□□□□ -0.99
SHB17YKR043C PDE2P06776 526 aa8.88□□□□□ -0.99
SHB17YKR043C PDA1P16387 420 aaKnown RBP8.88□□□□□ -0.99
SHB17YKR043C DBF2P22204 572 aa8.88□□□□□ -0.99
SHB17YKR043C DTR1P38125 572 aa8.88□□□□□ -0.99
SHB17YKR043C SDP1P40479 209 aa8.88□□□□□ -0.99
SHB17YKR043C PPT1P53043 513 aa8.88□□□□□ -0.99
SHB17YKR043C YLR173WQ06247 608 aa8.88□□□□□ -0.99
SHB17YKR043C THI72Q08579 599 aa8.88□□□□□ -0.99
SHB17YKR043C FIT3Q08907 204 aa8.88□□□□□ -0.99
SHB17YKR043C THP3Q12049 470 aaKnown RBP8.88□□□□□ -0.99
SHB17YKR043C RRI1Q12468 440 aa8.88□□□□□ -0.99
SHB17YKR043C VCX1Q99385 411 aa8.88□□□□□ -0.99
SHB17YKR043C ENA1P13587 1091 aa8.87□□□□□ -0.99
SHB17YKR043C RPA135P22138 1203 aaKnown RBP8.87□□□□□ -0.99
SHB17YKR043C MEK1P24719 497 aaPredicted RBP8.87□□□□□ -0.99
SHB17YKR043C ERG4P25340 473 aa8.87□□□□□ -0.99
SHB17YKR043C YCL042WP25572 119 aa8.87□□□□□ -0.99
SHB17YKR043C YKR015CP36111 568 aa8.87□□□□□ -0.99
SHB17YKR043C YPK3P38070 525 aa8.87□□□□□ -0.99
SHB17YKR043C BUR6P40096 142 aa8.87□□□□□ -0.99
SHB17YKR043C GAT2P40209 560 aa8.87□□□□□ -0.99
SHB17YKR043C NTA1P40354 457 aa8.87□□□□□ -0.99
SHB17YKR043C QDR1P40475 563 aa8.87□□□□□ -0.99
SHB17YKR043C MTM1P53320 366 aa8.87□□□□□ -0.99
SHB17YKR043C ENA2Q01896 1091 aa8.87□□□□□ -0.99
SHB17YKR043C YOR378WQ08902 515 aa8.87□□□□□ -0.99
SHB17YKR043C RNH203Q12338 110 aa8.87□□□□□ -0.99
SHB17YKR043C ENA5Q12691 1091 aa8.87□□□□□ -0.99
SHB17YKR043C YGL041W-AP0C5N3 154 aa8.86□□□□□ -0.99
SHB17YKR043C MDH1P17505 334 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
SHB17YKR043C PUT3P25502 979 aaPredicted RBP8.86□□□□□ -0.99
SHB17YKR043C AVT6P40074 448 aa8.86□□□□□ -0.99
SHB17YKR043C PIG2P40187 538 aa8.86□□□□□ -0.99
SHB17YKR043C LOH1P47055 219 aa8.86□□□□□ -0.99
SHB17YKR043C TMA20P89886 181 aaPredicted RBP8.86□□□□□ -0.99
SHB17YKR043C NOG1Q02892 647 aaKnown RBP8.86□□□□□ -0.99
SHB17YKR043C RSC58Q07979 502 aa8.86□□□□□ -0.99
SHB17YKR043C IES3Q12345 250 aa8.86□□□□□ -0.99
SHB17YKR043C BOS1P25385 244 aa8.85□□□□□ -0.99
SHB17YKR043C YKL187CP34231 750 aa8.85□□□□□ -0.99
SHB17YKR043C APL3P38065 1025 aa8.85□□□□□ -0.99
SHB17YKR043C YJL055WP47044 245 aa8.85□□□□□ -0.99
SHB17YKR043C YLR346CQ06139 101 aa8.85□□□□□ -0.99
SHB17YKR043C COX5BP00425 151 aa8.84□□□□□ -0.99
SHB17YKR043C MET17P06106 444 aa8.84□□□□□ -0.99
SHB17YKR043C CLB6P32943 380 aa8.84□□□□□ -0.99
SHB17YKR043C SDS22P36047 338 aa8.84□□□□□ -0.99
SHB17YKR043C THI2P38141 450 aa8.84□□□□□ -0.99
SHB17YKR043C GOS1P38736 223 aa8.84□□□□□ -0.99
SHB17YKR043C FMC1P40491 155 aa8.84□□□□□ -0.99
SHB17YKR043C CCC1P47818 322 aa8.84□□□□□ -0.99
SHB17YKR043C RBS1Q05672 457 aaKnown RBP8.84□□□□□ -0.99
SHB17YKR043C BRE4Q07660 1125 aa8.84□□□□□ -0.99
SHB17YKR043C FRE5Q08908 694 aa8.84□□□□□ -0.99
SHB17YKR043C MSH5Q12175 901 aa8.84□□□□□ -0.99
SHB17YKR043C YOL114CQ12322 202 aa8.84□□□□□ -0.99
SHB17YKR043C DBF20P32328 564 aa8.83□□□□□ -1
SHB17YKR043C PUB1P32588 453 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
SHB17YKR043C SPT10P35208 640 aa8.83□□□□□ -1
SHB17YKR043C AIM20P40451 204 aa8.83□□□□□ -1
SHB17YKR043C TIR3P40552 269 aa8.83□□□□□ -1
SHB17YKR043C QRI1P43123 477 aaKnown RBP8.83□□□□□ -1
SHB17YKR043C UBC13P52490 153 aa8.83□□□□□ -1
SHB17YKR043C YIP5P53108 310 aa8.83□□□□□ -1
SHB17YKR043C SAM50P53969 484 aa8.83□□□□□ -1
SHB17YKR043C TIM10P87108 93 aa8.83□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms