RNA–Protein interactions for RNA: YIL040W

APQ12, Transcript of Protein required for nuclear envelope morphology, yeastyeast

Gene APQ12, Length 417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APQ12YIL040W YNL143CP53908 130 aa0.02□□□□□ -2.41
APQ12YIL040W YMR114CQ04471 368 aaKnown RBP0.02□□□□□ -2.41
APQ12YIL040W YLR446WQ06204 433 aa0.02□□□□□ -2.41
APQ12YIL040W YBL112CQ3E7Y4 105 aa0.02□□□□□ -2.41
APQ12YIL040W CYR1P08678 2026 aaKnown RBP0.02□□□□□ -2.41
APQ12YIL040W FKS1P38631 1876 aaKnown RBP0.01□□□□□ -2.41
APQ12YIL040W PRP8P33334 2413 aaKnown RBP0.01□□□□□ -2.41
APQ12YIL040W HSP82P02829 709 aaKnown RBP0.01□□□□□ -2.41
APQ12YIL040W RPL2AP0CX45 254 aaKnown RBP0.01□□□□□ -2.41
APQ12YIL040W RPL2BP0CX46 254 aaKnown RBP0.01□□□□□ -2.41
APQ12YIL040W FAA1P30624 700 aaKnown RBP0.01□□□□□ -2.41
APQ12YIL040W YHB1P39676 399 aaKnown RBP0.01□□□□□ -2.41
APQ12YIL040W BTT1P40314 149 aaPredicted RBP0.01□□□□□ -2.41
APQ12YIL040W HUA1P40325 198 aa0.01□□□□□ -2.41
APQ12YIL040W RPE1P46969 238 aa0.01□□□□□ -2.41
APQ12YIL040W SNX4P47057 423 aa0.01□□□□□ -2.41
APQ12YIL040W RPL37BP51402 88 aaKnown RBP0.01□□□□□ -2.41
APQ12YIL040W TAF6P53040 516 aa0.01□□□□□ -2.41
APQ12YIL040W YNR068CP53754 272 aa0.01□□□□□ -2.41
APQ12YIL040W AAH1P53909 347 aa0.01□□□□□ -2.41
APQ12YIL040W MRS2Q01926 470 aa0.01□□□□□ -2.41
APQ12YIL040W ECM18Q04623 453 aa0.01□□□□□ -2.41
APQ12YIL040W YMR310CQ04867 317 aaPredicted RBP0.01□□□□□ -2.41
APQ12YIL040W VAR1P02381 398 aa0□□□□□ -2.41
APQ12YIL040W FBA1P14540 359 aaKnown RBP0□□□□□ -2.41
APQ12YIL040W RDS1P25611 832 aa0□□□□□ -2.41
APQ12YIL040W ACB1P31787 87 aa0□□□□□ -2.41
APQ12YIL040W MCH2P36032 473 aa0□□□□□ -2.41
APQ12YIL040W JNM1P36224 373 aa0□□□□□ -2.41
APQ12YIL040W YPT32P51996 222 aaKnown RBP0□□□□□ -2.41
APQ12YIL040W UTP6Q02354 440 aaKnown RBP0□□□□□ -2.41
APQ12YIL040W YPL039WQ03080 316 aa0□□□□□ -2.41
APQ12YIL040W AIM36Q03798 255 aa0□□□□□ -2.41
APQ12YIL040W PEX12Q04370 399 aa0□□□□□ -2.41
APQ12YIL040W CSI2Q08054 341 aa0□□□□□ -2.41
APQ12YIL040W RIO1Q12196 484 aaKnown RBP0□□□□□ -2.41
APQ12YIL040W RGS2Q99188 309 aa0□□□□□ -2.41
APQ12YIL040W SCL1P21243 252 aaKnown RBP-0.01□□□□□ -2.41
APQ12YIL040W MDH2P22133 377 aa-0.01□□□□□ -2.41
APQ12YIL040W UBA1P22515 1024 aaKnown RBP-0.01□□□□□ -2.41
APQ12YIL040W ERG2P32352 222 aa-0.01□□□□□ -2.41
APQ12YIL040W GDH2P33327 1092 aaKnown RBP-0.01□□□□□ -2.41
APQ12YIL040W DRE2P36152 348 aa-0.01□□□□□ -2.41
APQ12YIL040W YBR219CP38317 127 aa-0.01□□□□□ -2.41
APQ12YIL040W VTC1P40046 129 aaRIP-Chip data-0.01□□□□□ -2.41not detected
APQ12YIL040W SHQ1P40486 507 aaPredicted RBP-0.01□□□□□ -2.41
APQ12YIL040W BMT5P40493 336 aa-0.01□□□□□ -2.41
APQ12YIL040W SPC19Q03954 165 aa-0.01□□□□□ -2.41
APQ12YIL040W SNX41Q04053 625 aa-0.01□□□□□ -2.41
APQ12YIL040W TFB5Q3E7C1 72 aaPredicted RBP-0.01□□□□□ -2.41
APQ12YIL040W CPA1P07258 411 aaKnown RBP-0.02□□□□□ -2.41
APQ12YIL040W YLL053CP0CD98 152 aa-0.02□□□□□ -2.41
APQ12YIL040W DSF1P0CX08 502 aa-0.02□□□□□ -2.41
APQ12YIL040W YNR073CP0CX09 502 aa-0.02□□□□□ -2.41
APQ12YIL040W VMA2P16140 517 aaKnown RBP-0.02□□□□□ -2.41
APQ12YIL040W CCA1P21269 546 aa-0.02□□□□□ -2.41
APQ12YIL040W VMA5P31412 392 aaKnown RBP-0.02□□□□□ -2.41
APQ12YIL040W VPH1P32563 840 aaKnown RBP-0.02□□□□□ -2.41
APQ12YIL040W COT1P32798 439 aa-0.02□□□□□ -2.41
APQ12YIL040W IMP3P32899 183 aaPredicted RBP-0.02□□□□□ -2.41
APQ12YIL040W PXA2P34230 853 aa-0.02□□□□□ -2.41
APQ12YIL040W UPS2P35200 230 aa-0.02□□□□□ -2.41
APQ12YIL040W POP8P38208 133 aa-0.02□□□□□ -2.41
APQ12YIL040W YPC1P38298 316 aa-0.02□□□□□ -2.41
APQ12YIL040W PHO89P38361 574 aa-0.02□□□□□ -2.41
APQ12YIL040W TCD1P38756 429 aa-0.02□□□□□ -2.41
APQ12YIL040W YHI9P38765 294 aa-0.02□□□□□ -2.41
APQ12YIL040W YHR035WP38769 630 aa-0.02□□□□□ -2.41
APQ12YIL040W DOG1P38774 246 aa-0.02□□□□□ -2.41
APQ12YIL040W AVT7P40501 490 aa-0.02□□□□□ -2.41
APQ12YIL040W YGR016WP53209 190 aa-0.02□□□□□ -2.41
APQ12YIL040W IRC4Q03036 179 aa-0.02□□□□□ -2.41
APQ12YIL040W PRM15Q03262 622 aa-0.02□□□□□ -2.41
APQ12YIL040W SMT3Q12306 101 aaKnown RBP-0.02□□□□□ -2.41
APQ12YIL040W UTP23Q12339 254 aaKnown RBP-0.02□□□□□ -2.41
APQ12YIL040W MHT1Q12525 324 aa-0.02□□□□□ -2.41
APQ12YIL040W RPL6BP05739 176 aaKnown RBP-0.03□□□□□ -2.41
APQ12YIL040W PPH21P23594 369 aa-0.03□□□□□ -2.41
APQ12YIL040W DPB2P24482 689 aaPredicted RBP-0.03□□□□□ -2.41
APQ12YIL040W AEP1P32493 518 aa-0.03□□□□□ -2.41
APQ12YIL040W MDL1P33310 695 aa-0.03□□□□□ -2.41
APQ12YIL040W CSG2P35206 410 aa-0.03□□□□□ -2.41
APQ12YIL040W SIF2P38262 535 aa-0.03□□□□□ -2.41
APQ12YIL040W GDT1P38301 280 aaPredicted RBP-0.03□□□□□ -2.41
APQ12YIL040W PRP39P39682 629 aaKnown RBP-0.03□□□□□ -2.41
APQ12YIL040W AVT2P39981 480 aa-0.03□□□□□ -2.41
APQ12YIL040W RPL13BP40212 199 aaKnown RBP-0.03□□□□□ -2.41
APQ12YIL040W YJL055WP47044 245 aa-0.03□□□□□ -2.41
APQ12YIL040W TAD2P47058 250 aa-0.03□□□□□ -2.41
APQ12YIL040W UBC13P52490 153 aa-0.03□□□□□ -2.41
APQ12YIL040W VPS9P54787 451 aa-0.03□□□□□ -2.41
APQ12YIL040W RPL6AQ02326 176 aaKnown RBP-0.03□□□□□ -2.41
APQ12YIL040W RVB1Q03940 463 aaKnown RBP-0.03□□□□□ -2.41
APQ12YIL040W YLR162WQ06235 118 aa-0.03□□□□□ -2.41
APQ12YIL040W RPL13AQ12690 199 aaPredicted RBP-0.03□□□□□ -2.41
APQ12YIL040W SMC6Q12749 1114 aa-0.03□□□□□ -2.41
APQ12YIL040W RAD3P06839 778 aa-0.04□□□□□ -2.42
APQ12YIL040W DDI2P0CH63 225 aa-0.04□□□□□ -2.42
APQ12YIL040W DDI3P0CH64 225 aa-0.04□□□□□ -2.42
APQ12YIL040W PEX4P29340 183 aa-0.04□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms