RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W MRPL49P40858 161 aaPredicted RBP0.09□□□□□ -2.39
CSE1YGL238W ECO1P43605 281 aa0.09□□□□□ -2.39
CSE1YGL238W YFR054CP43622 192 aa0.09□□□□□ -2.39
CSE1YGL238W ASG7P46993 209 aa0.09□□□□□ -2.39
CSE1YGL238W FMP48P53233 369 aa0.09□□□□□ -2.39
CSE1YGL238W VPS72Q03388 795 aa0.09□□□□□ -2.39
CSE1YGL238W UBX2Q04228 584 aa0.09□□□□□ -2.39
CSE1YGL238W GAS2Q06135 555 aa0.09□□□□□ -2.39
CSE1YGL238W HMS1Q12398 434 aa0.09□□□□□ -2.39
CSE1YGL238W EMC6Q12431 108 aa0.09□□□□□ -2.39
CSE1YGL238W AFI1Q99222 893 aa0.09□□□□□ -2.39
CSE1YGL238W RAS2P01120 322 aaKnown RBP0.09□□□□□ -2.4
CSE1YGL238W YER188C-AP0C0V2 99 aa0.09□□□□□ -2.4
CSE1YGL238W ICL1P28240 557 aaPredicted RBP0.09□□□□□ -2.4
CSE1YGL238W MRPS5P33759 307 aa0.09□□□□□ -2.4
CSE1YGL238W YOR062CP36025 268 aa0.09□□□□□ -2.4
CSE1YGL238W LCB2P40970 561 aa0.09□□□□□ -2.4
CSE1YGL238W CAX4P53223 239 aa0.09□□□□□ -2.4
CSE1YGL238W MRPL19P53875 158 aa0.09□□□□□ -2.4
CSE1YGL238W ERB1Q04660 807 aaKnown RBP0.09□□□□□ -2.4
CSE1YGL238W AAD15Q08361 143 aa0.09□□□□□ -2.4
CSE1YGL238W SSK22P25390 1331 aaPredicted RBP0.09□□□□□ -2.4
CSE1YGL238W RAD1P06777 1100 aa0.08□□□□□ -2.4
CSE1YGL238W YAK1P14680 807 aa0.08□□□□□ -2.4
CSE1YGL238W DAL82P21705 255 aa0.08□□□□□ -2.4
CSE1YGL238W MRPL8P22353 238 aa0.08□□□□□ -2.4
CSE1YGL238W YCR025CP25352 136 aa0.08□□□□□ -2.4
CSE1YGL238W PHO91P27514 894 aa0.08□□□□□ -2.4
CSE1YGL238W DOA1P36037 715 aa0.08□□□□□ -2.4
CSE1YGL238W PET8P38921 284 aa0.08□□□□□ -2.4
CSE1YGL238W YDR089WP38966 869 aa0.08□□□□□ -2.4
CSE1YGL238W NUP84P52891 726 aa0.08□□□□□ -2.4
CSE1YGL238W INM2Q05533 292 aa0.08□□□□□ -2.4
CSE1YGL238W IPK1Q06667 281 aa0.08□□□□□ -2.4
CSE1YGL238W PRM4Q12498 284 aa0.08□□□□□ -2.4
CSE1YGL238W REP1P03871 373 aa0.08□□□□□ -2.4
CSE1YGL238W RED1P14291 827 aa0.08□□□□□ -2.4
CSE1YGL238W UTR1P21373 530 aa0.08□□□□□ -2.4
CSE1YGL238W DBR1P24309 405 aaKnown RBP0.08□□□□□ -2.4
CSE1YGL238W DPB3P27344 201 aa0.08□□□□□ -2.4
CSE1YGL238W GPX1P36014 167 aa0.08□□□□□ -2.4
CSE1YGL238W NAB3P38996 802 aaKnown RBP RIP-Chip data0.08□□□□□ -2.4 RIP-Chip
CSE1YGL238W LSM4P40070 187 aaKnown RBP0.08□□□□□ -2.4
CSE1YGL238W UTP25P40498 721 aaKnown RBP0.08□□□□□ -2.4
CSE1YGL238W GPD2P41911 440 aaKnown RBP0.08□□□□□ -2.4
CSE1YGL238W YDR541CQ03049 344 aa0.08□□□□□ -2.4
CSE1YGL238W YDR114CQ04597 100 aa0.08□□□□□ -2.4
CSE1YGL238W AEP3Q12089 606 aa0.08□□□□□ -2.4
CSE1YGL238W IES3Q12345 250 aa0.08□□□□□ -2.4
CSE1YGL238W ATG5Q12380 294 aa0.08□□□□□ -2.4
CSE1YGL238W UBA3Q99344 299 aa0.08□□□□□ -2.4
CSE1YGL238W POL2P21951 2222 aaKnown RBP0.08□□□□□ -2.4
CSE1YGL238W URA10P30402 227 aa0.08□□□□□ -2.4
CSE1YGL238W SWE1P32944 819 aa0.08□□□□□ -2.4
CSE1YGL238W MAL32P38158 584 aa0.08□□□□□ -2.4
CSE1YGL238W YHR122WP38829 231 aa0.08□□□□□ -2.4
CSE1YGL238W SYS1P41544 203 aa0.08□□□□□ -2.4
CSE1YGL238W NUP49Q02199 472 aa0.08□□□□□ -2.4
CSE1YGL238W STE23Q06010 1027 aa0.08□□□□□ -2.4
CSE1YGL238W SPE3Q12074 293 aaKnown RBP0.08□□□□□ -2.4
CSE1YGL238W HFA1P32874 2273 aa0.07□□□□□ -2.4
CSE1YGL238W MRPL20P22354 195 aaPredicted RBP0.07□□□□□ -2.4
CSE1YGL238W RPC53P25441 422 aa0.07□□□□□ -2.4
CSE1YGL238W KDX1P36005 433 aa0.07□□□□□ -2.4
CSE1YGL238W PEX32P38292 413 aa0.07□□□□□ -2.4
CSE1YGL238W SHQ1P40486 507 aaPredicted RBP0.07□□□□□ -2.4
CSE1YGL238W YIL054WP40524 105 aa0.07□□□□□ -2.4
CSE1YGL238W YNR066CP53752 436 aa0.07□□□□□ -2.4
CSE1YGL238W TRM44Q02648 567 aaKnown RBP0.07□□□□□ -2.4
CSE1YGL238W PEX10Q05568 337 aa0.07□□□□□ -2.4
CSE1YGL238W BUR2Q05949 395 aa0.07□□□□□ -2.4
CSE1YGL238W LOA1Q06508 300 aa0.07□□□□□ -2.4
CSE1YGL238W SHS1Q07657 551 aa0.07□□□□□ -2.4
CSE1YGL238W ISA2Q12425 185 aa0.07□□□□□ -2.4
CSE1YGL238W CYR1P08678 2026 aaKnown RBP0.07□□□□□ -2.4
CSE1YGL238W SNA3P14359 133 aa0.07□□□□□ -2.4
CSE1YGL238W REC107P21651 314 aa0.07□□□□□ -2.4
CSE1YGL238W SLM5P25345 492 aaKnown RBP0.07□□□□□ -2.4
CSE1YGL238W ERG9P29704 444 aa0.07□□□□□ -2.4
CSE1YGL238W CSE1P33307 960 aa0.07□□□□□ -2.4
CSE1YGL238W SPP381P38282 291 aaPredicted RBP0.07□□□□□ -2.4
CSE1YGL238W YGL118CP53132 145 aa0.07□□□□□ -2.4
CSE1YGL238W RTS3P53289 263 aa0.07□□□□□ -2.4
CSE1YGL238W MAL13P53338 473 aa0.07□□□□□ -2.4
CSE1YGL238W SEC13Q04491 297 aaKnown RBP0.07□□□□□ -2.4
CSE1YGL238W RDS3Q06835 107 aaPredicted RBP0.07□□□□□ -2.4
CSE1YGL238W YOR292CQ08743 309 aa0.07□□□□□ -2.4
CSE1YGL238W YBL112CQ3E7Y4 105 aa0.07□□□□□ -2.4
CSE1YGL238W RAD7P06779 565 aa0.06□□□□□ -2.4
CSE1YGL238W MDH1P17505 334 aaKnown RBP RIP-Chip data0.06□□□□□ -2.4not detected
CSE1YGL238W LTV1P34078 463 aa0.06□□□□□ -2.4
CSE1YGL238W MYO3P36006 1272 aa0.06□□□□□ -2.4
CSE1YGL238W VAB2P40003 282 aa0.06□□□□□ -2.4
CSE1YGL238W LYS12P40495 371 aaKnown RBP0.06□□□□□ -2.4
CSE1YGL238W RPS29BP41058 56 aaKnown RBP0.06□□□□□ -2.4
CSE1YGL238W YPL247CQ12523 523 aa0.06□□□□□ -2.4
CSE1YGL238W CDC31P06704 161 aaKnown RBP0.06□□□□□ -2.4
CSE1YGL238W YBR062CP38239 180 aa0.06□□□□□ -2.4
CSE1YGL238W YHL026CP38740 315 aa0.06□□□□□ -2.4
CSE1YGL238W YHR045WP38775 560 aa0.06□□□□□ -2.4
Retrieved 100 of 5,963 RNA–protein pairs in 130.4 ms