RNA–Protein interactions for RNA: YDR421W

ARO80, Transcript of Zinc finger transcriptional activator of the Zn2Cys6 family, yeast

Gene ARO80, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARO80	YDR421W	MDH2	P22133	377 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	RPA135	P22138	1203 aa	Known RBP	3.41	□□□□□ -1.86
ARO80	YDR421W	PEX4	P29340	183 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.41	□□□□□ -1.86	not detected
ARO80	YDR421W	SOF1	P33750	489 aa	Known RBP	3.41	□□□□□ -1.86
ARO80	YDR421W	SWD2	P36104	329 aa	Predicted RBP	3.41	□□□□□ -1.86
ARO80	YDR421W	PDX3	P38075	228 aa	Known RBP	3.41	□□□□□ -1.86
ARO80	YDR421W	MTL1	P53214	551 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	YNR062C	P53748	327 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	ASI2	P53895	289 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	YLR152C	P54072	576 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	PLB2	Q03674	706 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	YMD8	Q03697	442 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	MIX14	Q04341	121 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	CRR1	Q05790	422 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	DCI1	Q08558	271 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	RTC5	Q12108	567 aa	Known RBP	3.41	□□□□□ -1.86
ARO80	YDR421W	RPC40	P07703	335 aa	Known RBP	3.41	□□□□□ -1.86
ARO80	YDR421W	YCL002C	P25565	263 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	GSH1	P32477	678 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	MBA1	P38300	278 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	ECM34	P38728	170 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	YIL029C	P40538	142 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	YAE1	P47118	141 aa	Predicted RBP	3.41	□□□□□ -1.86
ARO80	YDR421W	GMC1	Q04399	608 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	NEJ1	Q06148	342 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	YOL114C	Q12322	202 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	SOD2	P00447	233 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	OPI3	P05375	206 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	MRPS28	P21771	286 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	IFM1	P25038	676 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	MNS1	P32906	549 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	MRPS5	P33759	307 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	YOX1	P34161	385 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	YKR015C	P36111	568 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	YBR137W	P38276	179 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	SIP18	P50263	79 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	YGR016W	P53209	190 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	COS1	P53822	381 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	SMX3	P54999	86 aa	Predicted RBP	3.41	□□□□□ -1.86
ARO80	YDR421W	SRL2	Q12020	392 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	ERP4	Q12450	207 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	YHR214C-E	Q8TGK0	99 aa		3.41	□□□□□ -1.86
ARO80	YDR421W	MAK32	P23060	363 aa		3.4	□□□□□ -1.86
ARO80	YDR421W	ECM31	P38122	312 aa		3.4	□□□□□ -1.86
ARO80	YDR421W	KRE29	P40026	464 aa		3.4	□□□□□ -1.86
ARO80	YDR421W	MOB2	P43563	287 aa		3.4	□□□□□ -1.86
ARO80	YDR421W	YAP6	Q03935	383 aa		3.4	□□□□□ -1.86
ARO80	YDR421W	SPC3	Q12133	184 aa		3.4	□□□□□ -1.86
ARO80	YDR421W	ISA2	Q12425	185 aa		3.4	□□□□□ -1.86
ARO80	YDR421W	PDE2	P06776	526 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	GCD1	P09032	578 aa	Predicted RBP	3.4	□□□□□ -1.87
ARO80	YDR421W	ENA1	P13587	1091 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	ERG4	P25340	473 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	RER1	P25560	188 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	AHC2	P25649	128 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.4	□□□□□ -1.87	not detected
ARO80	YDR421W	RSM22	P36056	628 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	CCS1	P40202	249 aa	Known RBP	3.4	□□□□□ -1.87
ARO80	YDR421W	EGT2	P42835	1041 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	TNA1	P53322	534 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	SCW4	P53334	386 aa	Known RBP	3.4	□□□□□ -1.87
ARO80	YDR421W	BUD17	P53727	317 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	YNR048W	P53740	393 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	ENA2	Q01896	1091 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	SSK1	Q07084	712 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	YDL176W	Q12027	708 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.4	□□□□□ -1.87	not detected
ARO80	YDR421W	ENA5	Q12691	1091 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	LSO1	Q3E827	93 aa		3.4	□□□□□ -1.87
ARO80	YDR421W	HNM1	P19807	563 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	FPS1	P23900	669 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	APL3	P38065	1025 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	DTR1	P38125	572 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	PHB1	P40961	287 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	MSS2	P40990	351 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	SKP1	P52286	194 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	MRX9	Q07349	420 aa	Known RBP	3.39	□□□□□ -1.87
ARO80	YDR421W	Q0297	Q9ZZV8	51 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	TDH2	P00358	332 aa	Known RBP	3.39	□□□□□ -1.87
ARO80	YDR421W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.39	□□□□□ -1.87	not detected
ARO80	YDR421W	RPB8	P20436	146 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	YCR100C	P25606	316 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	GAR1	P28007	205 aa	Known RBP	3.39	□□□□□ -1.87
ARO80	YDR421W	PAU2	P32612	120 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	YBR220C	P38318	560 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	RTT105	P40063	208 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	TDA1	Q03533	586 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	GRC3	Q07845	632 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	LOT6	Q07923	191 aa		3.39	□□□□□ -1.87
ARO80	YDR421W	YGK3	Q12222	375 aa	Predicted RBP	3.39	□□□□□ -1.87
ARO80	YDR421W	SAM35	P14693	329 aa		3.38	□□□□□ -1.87
ARO80	YDR421W	AFG1	P32317	509 aa		3.38	□□□□□ -1.87
ARO80	YDR421W	SAC1	P32368	623 aa	Known RBP	3.38	□□□□□ -1.87
ARO80	YDR421W	GPI18	P38211	433 aa		3.38	□□□□□ -1.87
ARO80	YDR421W	TCM62	P38228	572 aa	Known RBP	3.38	□□□□□ -1.87
ARO80	YDR421W	YBR138C	P38277	524 aa		3.38	□□□□□ -1.87
ARO80	YDR421W	YHL044W	P38727	235 aa		3.38	□□□□□ -1.87
ARO80	YDR421W	EGD2	P38879	174 aa	Known RBP	3.38	□□□□□ -1.87
ARO80	YDR421W	YFR054C	P43622	192 aa		3.38	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms