RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W HRD3Q05787 833 aa1.39□□□□□ -2.19
SXM1YDR395W RAD34Q06665 692 aa1.39□□□□□ -2.19
SXM1YDR395W BER1Q06688 274 aaKnown RBP1.39□□□□□ -2.19
SXM1YDR395W SOR2Q07786 357 aa1.39□□□□□ -2.19
SXM1YDR395W PEX27Q08580 376 aa1.39□□□□□ -2.19
SXM1YDR395W TAF10Q12030 206 aa1.39□□□□□ -2.19
SXM1YDR395W YPL150WQ12152 901 aa1.39□□□□□ -2.19
SXM1YDR395W USB1Q12208 290 aaKnown RBP1.39□□□□□ -2.19
SXM1YDR395W EFG1Q3E705 233 aaKnown RBP1.39□□□□□ -2.19
SXM1YDR395W FSH3Q99369 266 aa1.39□□□□□ -2.19
SXM1YDR395W IRA2P19158 3079 aa1.38□□□□□ -2.19
SXM1YDR395W SUC2P00724 532 aa1.38□□□□□ -2.19
SXM1YDR395W COR1P07256 457 aa1.38□□□□□ -2.19
SXM1YDR395W PPR1P07272 904 aaPredicted RBP1.38□□□□□ -2.19
SXM1YDR395W DCC1P25559 380 aa1.38□□□□□ -2.19
SXM1YDR395W CSM1P25651 190 aa1.38□□□□□ -2.19
SXM1YDR395W APL1P27351 700 aa1.38□□□□□ -2.19
SXM1YDR395W ARO7P32178 256 aa1.38□□□□□ -2.19
SXM1YDR395W IES6P32617 166 aa1.38□□□□□ -2.19
SXM1YDR395W REC114P32841 428 aa1.38□□□□□ -2.19
SXM1YDR395W MRPL6P32904 214 aa1.38□□□□□ -2.19
SXM1YDR395W LHP1P33399 275 aaKnown RBP1.38□□□□□ -2.19
SXM1YDR395W YPT53P36019 220 aa1.38□□□□□ -2.19
SXM1YDR395W TCM62P38228 572 aaKnown RBP1.38□□□□□ -2.19
SXM1YDR395W ECM8P38246 354 aa1.38□□□□□ -2.19
SXM1YDR395W IST2P38250 946 aa1.38□□□□□ -2.19
SXM1YDR395W ICS2P38284 255 aa1.38□□□□□ -2.19
SXM1YDR395W SHG1P38337 142 aa1.38□□□□□ -2.19
SXM1YDR395W GOS1P38736 223 aa1.38□□□□□ -2.19
SXM1YDR395W NVJ1P38881 321 aa1.38□□□□□ -2.19
SXM1YDR395W CIN4P39110 191 aa1.38□□□□□ -2.19
SXM1YDR395W DSE1P40077 573 aa1.38□□□□□ -2.19
SXM1YDR395W BUR6P40096 142 aa1.38□□□□□ -2.19
SXM1YDR395W LYS12P40495 371 aaKnown RBP1.38□□□□□ -2.19
SXM1YDR395W SAS2P40963 338 aa1.38□□□□□ -2.19
SXM1YDR395W CHA4P43634 648 aa1.38□□□□□ -2.19
SXM1YDR395W YJR030CP47101 745 aa1.38□□□□□ -2.19
SXM1YDR395W NAS6P50086 228 aa1.38□□□□□ -2.19
SXM1YDR395W ERG26P53199 349 aaKnown RBP1.38□□□□□ -2.19
SXM1YDR395W PEX31P53203 462 aa1.38□□□□□ -2.19
SXM1YDR395W NRK1P53915 240 aa1.38□□□□□ -2.19
SXM1YDR395W COG5P53951 403 aa1.38□□□□□ -2.19
SXM1YDR395W YPL068CQ02749 293 aa1.38□□□□□ -2.19
SXM1YDR395W YMR321CQ04898 105 aa1.38□□□□□ -2.19
SXM1YDR395W ECI1Q05871 280 aa1.38□□□□□ -2.19
SXM1YDR395W RFU1Q08003 200 aa1.38□□□□□ -2.19
SXM1YDR395W BBP1Q12365 385 aa1.38□□□□□ -2.19
SXM1YDR395W DCN1Q12395 269 aa1.38□□□□□ -2.19
SXM1YDR395W RDI1Q12434 202 aa1.38□□□□□ -2.19
SXM1YDR395W YPR1Q12458 312 aa1.38□□□□□ -2.19
SXM1YDR395W SAL1D6W196 494 aa1.38□□□□□ -2.19
SXM1YDR395W GAL10P04397 699 aa1.38□□□□□ -2.19
SXM1YDR395W RPP2AP05319 106 aaKnown RBP1.38□□□□□ -2.19
SXM1YDR395W KIN28P06242 306 aa1.38□□□□□ -2.19
SXM1YDR395W YLL053CP0CD98 152 aa1.38□□□□□ -2.19
SXM1YDR395W EXO70P19658 623 aa1.38□□□□□ -2.19
SXM1YDR395W CLB2P24869 491 aa1.38□□□□□ -2.19
SXM1YDR395W IFM1P25038 676 aa1.38□□□□□ -2.19
SXM1YDR395W CTS1P29029 562 aa1.38□□□□□ -2.19
SXM1YDR395W FUN26P31381 517 aa1.38□□□□□ -2.19
SXM1YDR395W RPS1AP33442 255 aaKnown RBP1.38□□□□□ -2.19
SXM1YDR395W UTP11P34247 250 aaPredicted RBP1.38□□□□□ -2.19
SXM1YDR395W YKL063CP35725 167 aa1.38□□□□□ -2.19
SXM1YDR395W MCH2P36032 473 aa1.38□□□□□ -2.19
SXM1YDR395W YCR087C-AP37263 153 aa1.38□□□□□ -2.19
SXM1YDR395W ECM13P38195 257 aa1.38□□□□□ -2.19
SXM1YDR395W RRP4P38792 359 aaKnown RBP1.38□□□□□ -2.19
SXM1YDR395W VRG4P40107 337 aa1.38□□□□□ -2.19
SXM1YDR395W YCH1P42937 148 aa1.38□□□□□ -2.19
SXM1YDR395W GAT1P43574 510 aa1.38□□□□□ -2.19
SXM1YDR395W OST3P48439 350 aa1.38□□□□□ -2.19
SXM1YDR395W COQ5P49017 307 aa1.38□□□□□ -2.19
SXM1YDR395W PRP24P49960 444 aaKnown RBP1.38□□□□□ -2.19
SXM1YDR395W SYF2P53277 215 aaPredicted RBP1.38□□□□□ -2.19
SXM1YDR395W ZRG17P53735 605 aa1.38□□□□□ -2.19
SXM1YDR395W TPS1Q00764 495 aaKnown RBP1.38□□□□□ -2.19
SXM1YDR395W RSM23Q01163 450 aa1.38□□□□□ -2.19
SXM1YDR395W ABF2Q02486 183 aa1.38□□□□□ -2.19
SXM1YDR395W TRM82Q03774 444 aa1.38□□□□□ -2.19
SXM1YDR395W NEJ1Q06148 342 aa1.38□□□□□ -2.19
SXM1YDR395W TEN1Q07921 160 aa1.38□□□□□ -2.19
SXM1YDR395W HNT3Q08702 217 aa1.38□□□□□ -2.19
SXM1YDR395W THP3Q12049 470 aaKnown RBP1.38□□□□□ -2.19
SXM1YDR395W APC9Q12107 265 aa1.38□□□□□ -2.19
SXM1YDR395W YOR114WQ12219 294 aa1.38□□□□□ -2.19
SXM1YDR395W RRP42Q12277 265 aaPredicted RBP1.38□□□□□ -2.19
SXM1YDR395W RRI1Q12468 440 aa1.38□□□□□ -2.19
SXM1YDR395W YER175W-AQ8TGU4 54 aa1.38□□□□□ -2.19
SXM1YDR395W YOR304C-AO14468 76 aa1.37□□□□□ -2.19
SXM1YDR395W HIS3P06633 220 aa1.37□□□□□ -2.19
SXM1YDR395W PHO2P07269 559 aa1.37□□□□□ -2.19
SXM1YDR395W CDC6P09119 513 aa1.37□□□□□ -2.19
SXM1YDR395W PUT1P09368 476 aa1.37□□□□□ -2.19
SXM1YDR395W GCY1P14065 312 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
SXM1YDR395W CPT1P17898 393 aa1.37□□□□□ -2.19
SXM1YDR395W YSR3P23501 404 aa1.37□□□□□ -2.19
SXM1YDR395W YCR101CP25607 182 aa1.37□□□□□ -2.19
SXM1YDR395W ITR2P30606 609 aa1.37□□□□□ -2.19
SXM1YDR395W VMA5P31412 392 aaKnown RBP1.37□□□□□ -2.19
SXM1YDR395W ACB1P31787 87 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms