RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeastyeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPC2YDR213W PML1Q07930 204 aaPredicted RBP3.96□□□□□ -1.78
UPC2YDR213W ATX2Q12067 313 aa3.96□□□□□ -1.78
UPC2YDR213W BSC1Q12140 328 aa3.96□□□□□ -1.78
UPC2YDR213W YPR063CQ12160 140 aa3.96□□□□□ -1.78
UPC2YDR213W SFG1Q12507 346 aa3.96□□□□□ -1.78
UPC2YDR213W YIL134C-AQ45U18 67 aa3.96□□□□□ -1.78
UPC2YDR213W MRPL44P19956 98 aa3.95□□□□□ -1.78
UPC2YDR213W YCR100CP25606 316 aa3.95□□□□□ -1.78
UPC2YDR213W ATS1P31386 333 aa3.95□□□□□ -1.78
UPC2YDR213W KRE6P32486 720 aa3.95□□□□□ -1.78
UPC2YDR213W PRP18P33411 251 aaPredicted RBP3.95□□□□□ -1.78
UPC2YDR213W ELF1P36053 145 aa3.95□□□□□ -1.78
UPC2YDR213W SDH4P37298 181 aa3.95□□□□□ -1.78
UPC2YDR213W DTR1P38125 572 aa3.95□□□□□ -1.78
UPC2YDR213W ASP1P38986 381 aaPredicted RBP3.95□□□□□ -1.78
UPC2YDR213W AGE2P40529 298 aa3.95□□□□□ -1.78
UPC2YDR213W EMC5P40540 141 aa3.95□□□□□ -1.78
UPC2YDR213W RPE1P46969 238 aa3.95□□□□□ -1.78
UPC2YDR213W LOH1P47055 219 aa3.95□□□□□ -1.78
UPC2YDR213W COS12P53053 380 aa3.95□□□□□ -1.78
UPC2YDR213W YGL185CP53100 379 aa3.95□□□□□ -1.78
UPC2YDR213W YNL143CP53908 130 aa3.95□□□□□ -1.78
UPC2YDR213W MTQ1P53944 314 aa3.95□□□□□ -1.78
UPC2YDR213W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
UPC2YDR213W SWF1Q04629 336 aa3.95□□□□□ -1.78
UPC2YDR213W TMA10Q06177 86 aa3.95□□□□□ -1.78
UPC2YDR213W IPK1Q06667 281 aa3.95□□□□□ -1.78
UPC2YDR213W YLR046CQ12253 270 aa3.95□□□□□ -1.78
UPC2YDR213W PCL9Q12477 304 aa3.95□□□□□ -1.78
UPC2YDR213W SKS1Q12505 502 aa3.95□□□□□ -1.78
UPC2YDR213W MET8P15807 274 aa3.95□□□□□ -1.78
UPC2YDR213W TRX3P25372 127 aa3.95□□□□□ -1.78
UPC2YDR213W MSK1P32048 576 aa3.95□□□□□ -1.78
UPC2YDR213W MKK1P32490 508 aa3.95□□□□□ -1.78
UPC2YDR213W ORC2P32833 620 aa3.95□□□□□ -1.78
UPC2YDR213W SNC2P33328 115 aa3.95□□□□□ -1.78
UPC2YDR213W NTF2P33331 125 aaKnown RBP3.95□□□□□ -1.78
UPC2YDR213W PMT1P33775 817 aa3.95□□□□□ -1.78
UPC2YDR213W GPT2P36148 743 aa3.95□□□□□ -1.78
UPC2YDR213W SHE3P38272 425 aaKnown RBP3.95□□□□□ -1.78
UPC2YDR213W INM1P38710 295 aa3.95□□□□□ -1.78
UPC2YDR213W CHS7P38843 316 aa3.95□□□□□ -1.78
UPC2YDR213W SDP1P40479 209 aa3.95□□□□□ -1.78
UPC2YDR213W STE24P47154 453 aa3.95□□□□□ -1.78
UPC2YDR213W YNL260CP53846 198 aa3.95□□□□□ -1.78
UPC2YDR213W GPI15P53961 229 aa3.95□□□□□ -1.78
UPC2YDR213W VBA4Q04602 768 aaKnown RBP3.95□□□□□ -1.78
UPC2YDR213W GSF2Q04697 403 aaKnown RBP3.95□□□□□ -1.78
UPC2YDR213W GIC2Q06648 383 aa3.95□□□□□ -1.78
UPC2YDR213W TFC7Q12415 435 aa3.95□□□□□ -1.78
UPC2YDR213W YCL012CQ8J0M4 134 aa3.95□□□□□ -1.78
UPC2YDR213W COX3P00420 269 aa3.94□□□□□ -1.78
UPC2YDR213W ADH3P07246 375 aaKnown RBP3.94□□□□□ -1.78
UPC2YDR213W TRP4P07285 380 aaPredicted RBP3.94□□□□□ -1.78
UPC2YDR213W SEC62P21825 274 aa3.94□□□□□ -1.78
UPC2YDR213W PUB1P32588 453 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
UPC2YDR213W CTF13P35203 478 aa3.94□□□□□ -1.78
UPC2YDR213W RMA1P36001 430 aaKnown RBP3.94□□□□□ -1.78
UPC2YDR213W PAN3P36102 679 aaPredicted RBP3.94□□□□□ -1.78
UPC2YDR213W RPS20P38701 121 aaKnown RBP3.94□□□□□ -1.78
UPC2YDR213W ARO9P38840 513 aaPredicted RBP3.94□□□□□ -1.78
UPC2YDR213W PNT1P38969 423 aa3.94□□□□□ -1.78
UPC2YDR213W YER010CP40011 234 aa3.94□□□□□ -1.78
UPC2YDR213W FMP10P40098 244 aa3.94□□□□□ -1.78
UPC2YDR213W FAU1P40099 211 aa3.94□□□□□ -1.78
UPC2YDR213W PUG1P40100 303 aa3.94□□□□□ -1.78
UPC2YDR213W MEP1P40260 492 aa3.94□□□□□ -1.78
UPC2YDR213W NAS2P40555 220 aa3.94□□□□□ -1.78
UPC2YDR213W BUL1P48524 976 aa3.94□□□□□ -1.78
UPC2YDR213W STD1Q02794 444 aa3.94□□□□□ -1.78
UPC2YDR213W YDR415CQ04033 374 aaPredicted RBP3.94□□□□□ -1.78
UPC2YDR213W YMR315WQ04869 349 aaKnown RBP3.94□□□□□ -1.78
UPC2YDR213W TEN1Q07921 160 aa3.94□□□□□ -1.78
UPC2YDR213W YPR071WQ12346 211 aa3.94□□□□□ -1.78
UPC2YDR213W CSR2Q12734 1121 aa3.94□□□□□ -1.78
UPC2YDR213W FAA1P30624 700 aaKnown RBP3.94□□□□□ -1.78
UPC2YDR213W MSS51P32335 436 aa3.94□□□□□ -1.78
UPC2YDR213W SFK1P35735 353 aa3.94□□□□□ -1.78
UPC2YDR213W EMC3P36039 253 aa3.94□□□□□ -1.78
UPC2YDR213W GMH1P36125 273 aa3.94□□□□□ -1.78
UPC2YDR213W MRPL16P38064 232 aa3.94□□□□□ -1.78
UPC2YDR213W SCO2P38072 301 aa3.94□□□□□ -1.78
UPC2YDR213W THI2P38141 450 aa3.94□□□□□ -1.78
UPC2YDR213W RIB5P38145 238 aa3.94□□□□□ -1.78
UPC2YDR213W ARC40P38328 384 aaKnown RBP3.94□□□□□ -1.78
UPC2YDR213W YFL054CP43549 646 aa3.94□□□□□ -1.78
UPC2YDR213W PAC10P48363 199 aa3.94□□□□□ -1.78
UPC2YDR213W AMA1P50082 593 aa3.94□□□□□ -1.78
UPC2YDR213W SPC19Q03954 165 aa3.94□□□□□ -1.78
UPC2YDR213W SMA2Q04658 369 aa3.94□□□□□ -1.78
UPC2YDR213W YMR253CQ04835 414 aa3.94□□□□□ -1.78
UPC2YDR213W BSP1Q06604 576 aa3.94□□□□□ -1.78
UPC2YDR213W IRC10Q08118 586 aa3.94□□□□□ -1.78
UPC2YDR213W LPX1Q12405 387 aaKnown RBP3.94□□□□□ -1.78
UPC2YDR213W FRE6Q12473 712 aa3.94□□□□□ -1.78
UPC2YDR213W HIP1P06775 603 aa3.93□□□□□ -1.78
UPC2YDR213W YML003WP0CF16 290 aa3.93□□□□□ -1.78
UPC2YDR213W RPL40AP0CH08 128 aaKnown RBP3.93□□□□□ -1.78
UPC2YDR213W RPL40BP0CH09 128 aaKnown RBP3.93□□□□□ -1.78
UPC2YDR213W SST2P11972 698 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms