RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 MOXD1Q6UVY6 613 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 USP38Q8NB14 1042 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 ZSWIM2Q8NEG5 633 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 AGBL3Q8NEM8 1001 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 PPP1R13LQ8WUF5 828 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 ACSF2Q96CM8 615 aaPredicted RBP12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 TRIM6Q9C030 488 aaPredicted RBP12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 PRM3Q9NNZ6 103 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 TOGARAM1Q9Y4F4 1720 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 F8VZ95 297 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 NOL4O94818 638 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 COMTP21964 271 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 ORC1Q13415 861 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 SYCP2LQ5T4T6 812 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 THOC1Q96FV9 657 aaKnown RBP12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 HSD17B14Q9BPX1 270 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 TAF1DQ9H5J8 278 aaPredicted RBP12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 COL20A1Q9P218 1284 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 TRAF3IP3Q9Y228 551 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 RIPK3Q9Y572 518 aa12.68□□□□□ -0.38
PACSIN1-202ENST00000374043 POC1B-GALNT4F8VUJ3 575 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 GGPS1O95749 300 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 PPP3CAQ08209 521 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 UGCGQ16739 394 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 RNF149Q8NC42 400 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 MCPH1Q8NEM0 835 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 TATDN2Q93075 761 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 ARHGEF26Q96DR7 871 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 RNF181Q9P0P0 153 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 VAV3Q9UKW4 847 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 PPP1R9AQ9ULJ8 1098 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 VTI1AQ96AJ9 217 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 CDHR1Q96JP9 859 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 CCDC77Q9BR77 488 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 ZWILCHQ9H900 591 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 AGO4Q9HCK5 861 aaKnown RBP12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 WRAP73Q9P2S5 460 aaPredicted RBP12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 CD2APQ9Y5K6 639 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 ITGB4P16144 1822 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 LRRD1A4D1F6 860 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 FGFR4P22455 802 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 ACTR2P61160 394 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 MAGOHP61326 146 aaKnown RBP12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 BSPRYQ5W0U4 402 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 FOXR1Q6PIV2 292 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 RHOT2Q8IXI1 618 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 C7orf31Q8N865 590 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 TTC16Q8NEE8 873 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 MOV10L1Q9BXT6 1211 aaKnown RBP12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 TTYH3Q9C0H2 523 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 RAB20Q9NX57 234 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 TBX20Q9UMR3 447 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 ANKRD63C9JTQ0 380 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 GOLGA8MH3BSY2 632 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 CTNND1O60716 968 aaKnown RBP12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 KRT15P19012 456 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 SEC24CP53992 1094 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 PGM5Q15124 567 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 TRIM50Q86XT4 487 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 ZNF526Q8TF50 670 aaPredicted RBP12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 SLC5A5Q92911 643 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 MAK16Q9BXY0 300 aaKnown RBP12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 IKBKGQ9Y6K9 419 aa12.67□□□□□ -0.38
PACSIN1-202ENST00000374043 NWD2Q9ULI1 1742 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 LAMA4Q16363 1823 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 USP54Q70EL1 1684 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 TARSL2A2RTX5 802 aaKnown RBP12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 SFNP31947 248 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 BACE1P56817 501 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 RWDD2BP57060 319 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 MTMR3Q13615 1198 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 CDO1Q16878 200 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 RNF169Q8NCN4 708 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 NEK9Q8TD19 979 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 SPIRE2Q8WWL2 714 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 CNKSR2Q8WXI2 1034 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 ZBTB45Q96K62 511 aaPredicted RBP12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 EIF3DO15371 548 aaKnown RBP eCLIP12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 SCP2P22307 547 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 ITGB3BPQ13352 177 aaPredicted RBP12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 CCDC137Q6PK04 289 aaKnown RBP12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 GPD1LQ8N335 351 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 TSEN2Q8NCE0 465 aaKnown RBP12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 PCSK1NQ9UHG2 260 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 ECEL1O95672 775 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 TNNC2P02585 160 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 WEE2P0C1S8 567 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 ATF2P15336 505 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 CDK17Q00537 523 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 SMAD1Q15797 465 aaKnown RBP12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 GPR162Q16538 588 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 DAB2IPQ5VWQ8 1189 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 FAM160B1Q5W0V3 765 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 HGSNATQ68CP4 663 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 CEP57Q86XR8 500 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 WHAMMQ8TF30 809 aa12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 HNRNPLLQ8WVV9 542 aaKnown RBP12.66□□□□□ -0.38
PACSIN1-202ENST00000374043 ATG4AQ8WYN0 398 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms