RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C SKG6P32900 734 aaPredicted RBP3.74□□□□□ -1.81
PEX12YMR026C BMH2P34730 273 aaKnown RBP3.74□□□□□ -1.81
PEX12YMR026C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.74□□□□□ -1.81not detected
PEX12YMR026C YKL071WP36086 256 aa3.74□□□□□ -1.81
PEX12YMR026C DBP7P36120 742 aaKnown RBP3.74□□□□□ -1.81
PEX12YMR026C RTR1P40084 226 aaPredicted RBP3.74□□□□□ -1.81
PEX12YMR026C FMP33P46998 180 aa3.74□□□□□ -1.81
PEX12YMR026C TIM21P53220 239 aa3.74□□□□□ -1.81
PEX12YMR026C MMT2Q08970 484 aa3.74□□□□□ -1.81
PEX12YMR026C GIS3Q12418 502 aa3.74□□□□□ -1.81
PEX12YMR026C ZIP1P31111 875 aa3.73□□□□□ -1.81
PEX12YMR026C ARO4P32449 370 aaKnown RBP3.73□□□□□ -1.81
PEX12YMR026C FMT1P32785 401 aa3.73□□□□□ -1.81
PEX12YMR026C TIP20P33891 701 aa3.73□□□□□ -1.81
PEX12YMR026C GCN20P43535 752 aaKnown RBP3.73□□□□□ -1.81
PEX12YMR026C ATG38Q05789 226 aaKnown RBP3.73□□□□□ -1.81
PEX12YMR026C YOL029CQ08187 201 aa3.73□□□□□ -1.81
PEX12YMR026C SLF1Q12034 447 aaKnown RBP3.73□□□□□ -1.81
PEX12YMR026C AUS1Q08409 1394 aa3.73□□□□□ -1.81
PEX12YMR026C YSR3P23501 404 aa3.72□□□□□ -1.81
PEX12YMR026C DCC1P25559 380 aa3.72□□□□□ -1.81
PEX12YMR026C YCR016WP25617 290 aaKnown RBP3.72□□□□□ -1.81
PEX12YMR026C CWP1P28319 239 aa3.72□□□□□ -1.81
PEX12YMR026C TPS2P31688 896 aaKnown RBP3.72□□□□□ -1.81
PEX12YMR026C CBF5P33322 483 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
PEX12YMR026C EFM1P38732 585 aa3.72□□□□□ -1.81
PEX12YMR026C SHQ1P40486 507 aaPredicted RBP3.72□□□□□ -1.81
PEX12YMR026C CGR1P53188 120 aa3.72□□□□□ -1.81
PEX12YMR026C PXR1P53335 271 aaPredicted RBP3.72□□□□□ -1.81
PEX12YMR026C PBP4Q07362 185 aaKnown RBP3.72□□□□□ -1.81
PEX12YMR026C RPN8Q08723 338 aaKnown RBP3.72□□□□□ -1.81
PEX12YMR026C TDH3P00359 332 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82 RIP-Chip
PEX12YMR026C FUS3P16892 353 aaKnown RBP3.71□□□□□ -1.82
PEX12YMR026C YER085CP40058 173 aa3.71□□□□□ -1.82
PEX12YMR026C INA22P40576 216 aa3.71□□□□□ -1.82
PEX12YMR026C PFS2P42841 465 aaKnown RBP3.71□□□□□ -1.82
PEX12YMR026C MRX5P47007 382 aa3.71□□□□□ -1.82
PEX12YMR026C TAF6P53040 516 aa3.71□□□□□ -1.82
PEX12YMR026C MNT4P53745 580 aa3.71□□□□□ -1.82
PEX12YMR026C YPL080CQ02826 108 aa3.71□□□□□ -1.82
PEX12YMR026C UBX2Q04228 584 aa3.71□□□□□ -1.82
PEX12YMR026C FAR10Q06001 478 aa3.71□□□□□ -1.82
PEX12YMR026C SIA1Q12212 622 aa3.71□□□□□ -1.82
PEX12YMR026C ERP3Q12403 225 aa3.71□□□□□ -1.82
PEX12YMR026C FRS2P15625 503 aaKnown RBP3.7□□□□□ -1.82
PEX12YMR026C POL30P15873 258 aaKnown RBP3.7□□□□□ -1.82
PEX12YMR026C MRPL25P23369 157 aa3.7□□□□□ -1.82
PEX12YMR026C RAD51P25454 400 aa3.7□□□□□ -1.82
PEX12YMR026C KRE6P32486 720 aa3.7□□□□□ -1.82
PEX12YMR026C HIS2P38635 335 aa3.7□□□□□ -1.82
PEX12YMR026C MSS2P40990 351 aa3.7□□□□□ -1.82
PEX12YMR026C HST4P53688 370 aa3.7□□□□□ -1.82
PEX12YMR026C NRM1P53718 249 aa3.7□□□□□ -1.82
PEX12YMR026C GIM3P53900 129 aa3.7□□□□□ -1.82
PEX12YMR026C MRX8Q05473 314 aa3.7□□□□□ -1.82
PEX12YMR026C YDR018CQ12185 396 aa3.7□□□□□ -1.82
PEX12YMR026C PRM7Q12459 698 aa3.7□□□□□ -1.82
PEX12YMR026C SAL1D6W196 494 aa3.69□□□□□ -1.82
PEX12YMR026C RAD3P06839 778 aa3.69□□□□□ -1.82
PEX12YMR026C VPS1P21576 704 aaKnown RBP3.69□□□□□ -1.82
PEX12YMR026C CYM1P32898 989 aa3.69□□□□□ -1.82
PEX12YMR026C FRM2P37261 193 aa3.69□□□□□ -1.82
PEX12YMR026C SIP3P38717 1229 aa3.69□□□□□ -1.82
PEX12YMR026C FRT2P39734 528 aa3.69□□□□□ -1.82
PEX12YMR026C FMC1P40491 155 aa3.69□□□□□ -1.82
PEX12YMR026C UFE1P41834 346 aa3.69□□□□□ -1.82
PEX12YMR026C COX16P47081 118 aa3.69□□□□□ -1.82
PEX12YMR026C SRL4Q03085 281 aa3.69□□□□□ -1.82
PEX12YMR026C CLP1Q08685 445 aaPredicted RBP3.69□□□□□ -1.82
PEX12YMR026C YOR029WQ12243 111 aa3.69□□□□□ -1.82
PEX12YMR026C CDC36P06100 191 aaPredicted RBP3.68□□□□□ -1.82
PEX12YMR026C MSF1P08425 469 aa3.68□□□□□ -1.82
PEX12YMR026C RBK1P25332 333 aa3.68□□□□□ -1.82
PEX12YMR026C SRB4P32569 687 aa3.68□□□□□ -1.82
PEX12YMR026C GCG1P32656 232 aaKnown RBP3.68□□□□□ -1.82
PEX12YMR026C SWD2P36104 329 aaPredicted RBP3.68□□□□□ -1.82
PEX12YMR026C TRR2P38816 342 aa3.68□□□□□ -1.82
PEX12YMR026C KAP114P53067 1004 aa3.68□□□□□ -1.82
PEX12YMR026C BIO4P53630 237 aa3.68□□□□□ -1.82
PEX12YMR026C HCH1P53834 153 aa3.68□□□□□ -1.82
PEX12YMR026C PGA2P53903 129 aa3.68□□□□□ -1.82
PEX12YMR026C GMC2Q06201 188 aa3.68□□□□□ -1.82
PEX12YMR026C BER1Q06688 274 aaKnown RBP3.68□□□□□ -1.82
PEX12YMR026C FLO11P08640 1367 aa3.67□□□□□ -1.82
PEX12YMR026C COX2P00410 251 aa3.67□□□□□ -1.82
PEX12YMR026C ACB1P31787 87 aa3.67□□□□□ -1.82
PEX12YMR026C ZRT1P32804 376 aa3.67□□□□□ -1.82
PEX12YMR026C PRY2P36110 329 aa3.67□□□□□ -1.82
PEX12YMR026C SMF2P38778 549 aa3.67□□□□□ -1.82
PEX12YMR026C PRM9P39551 298 aa3.67□□□□□ -1.82
PEX12YMR026C YMR209CQ03648 457 aa3.67□□□□□ -1.82
PEX12YMR026C MYO5Q04439 1219 aaKnown RBP3.67□□□□□ -1.82
PEX12YMR026C SSQ1Q05931 657 aaPredicted RBP3.67□□□□□ -1.82
PEX12YMR026C APC9Q12107 265 aa3.67□□□□□ -1.82
PEX12YMR026C QCR6P00127 147 aa3.66□□□□□ -1.82
PEX12YMR026C REP1P03871 373 aa3.66□□□□□ -1.82
PEX12YMR026C CKA2P19454 339 aa3.66□□□□□ -1.82
PEX12YMR026C COX10P21592 462 aa3.66□□□□□ -1.82
PEX12YMR026C ITR2P30606 609 aa3.66□□□□□ -1.82
PEX12YMR026C BIG1P38813 335 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms