RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C CSG2P35206 410 aa3.04□□□□□ -1.92
VPS33YLR396C MRPL3P36516 390 aa3.04□□□□□ -1.92
VPS33YLR396C YBR056WP38081 501 aa3.04□□□□□ -1.92
VPS33YLR396C NTC20P38302 140 aaPredicted RBP3.04□□□□□ -1.92
VPS33YLR396C GTT1P40582 234 aa3.04□□□□□ -1.92
VPS33YLR396C SAS2P40963 338 aa3.04□□□□□ -1.92
VPS33YLR396C BUD13P46947 266 aaPredicted RBP3.04□□□□□ -1.92
VPS33YLR396C ART5P53244 586 aaKnown RBP3.04□□□□□ -1.92
VPS33YLR396C GOR1P53839 350 aa3.04□□□□□ -1.92
VPS33YLR396C TRM82Q03774 444 aa3.04□□□□□ -1.92
VPS33YLR396C YDR387CQ04162 555 aa3.04□□□□□ -1.92
VPS33YLR396C TRM12Q04235 462 aa3.04□□□□□ -1.92
VPS33YLR396C SPH1Q06160 661 aa3.04□□□□□ -1.92
VPS33YLR396C ESA1Q08649 445 aa3.04□□□□□ -1.92
VPS33YLR396C VAM3Q12241 283 aa3.04□□□□□ -1.92
VPS33YLR396C RBD2Q12270 262 aa3.04□□□□□ -1.92
VPS33YLR396C YPL119C-AQ3E751 87 aa3.04□□□□□ -1.92
VPS33YLR396C YOS9Q99220 542 aa3.04□□□□□ -1.92
VPS33YLR396C YCR100CP25606 316 aa3.03□□□□□ -1.92
VPS33YLR396C URA10P30402 227 aa3.03□□□□□ -1.92
VPS33YLR396C GLC7P32598 312 aaKnown RBP3.03□□□□□ -1.92
VPS33YLR396C FAD1P38913 306 aa3.03□□□□□ -1.92
VPS33YLR396C BFR1P38934 470 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
VPS33YLR396C AIM2P39721 246 aa3.03□□□□□ -1.92
VPS33YLR396C RBG1P39729 369 aa3.03□□□□□ -1.92
VPS33YLR396C YER034WP40022 185 aaKnown RBP3.03□□□□□ -1.92
VPS33YLR396C YJL016WP47072 561 aa3.03□□□□□ -1.92
VPS33YLR396C UBC12P52491 188 aa3.03□□□□□ -1.92
VPS33YLR396C OKP1P53298 406 aa3.03□□□□□ -1.92
VPS33YLR396C YNL010WP53981 241 aaKnown RBP3.03□□□□□ -1.92
VPS33YLR396C VPS9P54787 451 aa3.03□□□□□ -1.92
VPS33YLR396C SKO1Q02100 647 aa3.03□□□□□ -1.92
VPS33YLR396C ODC1Q03028 310 aa3.03□□□□□ -1.92
VPS33YLR396C PIR3Q03180 325 aa3.03□□□□□ -1.92
VPS33YLR396C PEX12Q04370 399 aa3.03□□□□□ -1.92
VPS33YLR396C BCH1Q05029 724 aa3.03□□□□□ -1.92
VPS33YLR396C BUR2Q05949 395 aa3.03□□□□□ -1.92
VPS33YLR396C NEJ1Q06148 342 aa3.03□□□□□ -1.92
VPS33YLR396C LAG2Q92325 660 aa3.03□□□□□ -1.92
VPS33YLR396C TIM9O74700 87 aa3.02□□□□□ -1.93
VPS33YLR396C GCY1P14065 312 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
VPS33YLR396C TRX1P22217 103 aaKnown RBP3.02□□□□□ -1.93
VPS33YLR396C RHB1P25378 209 aa3.02□□□□□ -1.93
VPS33YLR396C NTG1P31378 399 aa3.02□□□□□ -1.93
VPS33YLR396C DPH2P32461 534 aa3.02□□□□□ -1.93
VPS33YLR396C ECM25P32525 599 aa3.02□□□□□ -1.93
VPS33YLR396C VAM7P32912 316 aa3.02□□□□□ -1.93
VPS33YLR396C CPR5P35176 225 aa3.02□□□□□ -1.93
VPS33YLR396C FMP23P38231 175 aa3.02□□□□□ -1.93
VPS33YLR396C IDP2P41939 412 aa3.02□□□□□ -1.93
VPS33YLR396C ASN2P49090 572 aaKnown RBP3.02□□□□□ -1.93
VPS33YLR396C AIF1P52923 378 aa3.02□□□□□ -1.93
VPS33YLR396C YIP1P53039 248 aa3.02□□□□□ -1.93
VPS33YLR396C PCP1P53259 346 aa3.02□□□□□ -1.93
VPS33YLR396C NUP49Q02199 472 aa3.02□□□□□ -1.93
VPS33YLR396C ARL3Q02804 198 aa3.02□□□□□ -1.93
VPS33YLR396C GPI11Q06636 219 aa3.02□□□□□ -1.93
VPS33YLR396C SLF1Q12034 447 aaKnown RBP3.02□□□□□ -1.93
VPS33YLR396C PFK27Q12471 397 aaPredicted RBP3.02□□□□□ -1.93
VPS33YLR396C MHF1Q3E835 90 aa3.02□□□□□ -1.93
VPS33YLR396C FIG2P25653 1609 aa3.02□□□□□ -1.93
VPS33YLR396C ATP1P07251 545 aaKnown RBP3.02□□□□□ -1.93
VPS33YLR396C YAR066WP0CX18 203 aa3.02□□□□□ -1.93
VPS33YLR396C YHR214WP0CX19 203 aa3.02□□□□□ -1.93
VPS33YLR396C CDC13P32797 924 aaKnown RBP3.02□□□□□ -1.93
VPS33YLR396C YCR041WP37265 110 aa3.02□□□□□ -1.93
VPS33YLR396C SIF2P38262 535 aa3.02□□□□□ -1.93
VPS33YLR396C PRS2P38620 318 aaKnown RBP3.02□□□□□ -1.93
VPS33YLR396C SEN34P39707 275 aa3.02□□□□□ -1.93
VPS33YLR396C YJR011CP47086 261 aaPredicted RBP3.02□□□□□ -1.93
VPS33YLR396C ECM27P47144 725 aa3.02□□□□□ -1.93
VPS33YLR396C JAC1P53193 184 aa3.02□□□□□ -1.93
VPS33YLR396C NOP13P53883 403 aaKnown RBP RIP-Chip data3.02□□□□□ -1.93not detected
VPS33YLR396C CSN9Q03981 162 aa3.02□□□□□ -1.93
VPS33YLR396C SUE1Q06524 206 aa3.02□□□□□ -1.93
VPS33YLR396C MHR1Q06630 226 aa3.02□□□□□ -1.93
VPS33YLR396C PST2Q12335 198 aaKnown RBP3.02□□□□□ -1.93
VPS33YLR396C YGL194C-AQ2V2P6 80 aa3.02□□□□□ -1.93
VPS33YLR396C UBR2Q07963 1872 aa3.01□□□□□ -1.93
VPS33YLR396C CBP2P03874 630 aaPredicted RBP3.01□□□□□ -1.93
VPS33YLR396C HIP1P06775 603 aa3.01□□□□□ -1.93
VPS33YLR396C APA2P22108 325 aa3.01□□□□□ -1.93
VPS33YLR396C RPI1P23250 407 aaKnown RBP3.01□□□□□ -1.93
VPS33YLR396C ERV1P27882 189 aa3.01□□□□□ -1.93
VPS33YLR396C BEM1P29366 551 aa3.01□□□□□ -1.93
VPS33YLR396C ERG9P29704 444 aa3.01□□□□□ -1.93
VPS33YLR396C PTM1P32857 523 aa3.01□□□□□ -1.93
VPS33YLR396C YHR054CP38780 354 aa3.01□□□□□ -1.93
VPS33YLR396C BIG1P38813 335 aa3.01□□□□□ -1.93
VPS33YLR396C NDT80P38830 627 aa3.01□□□□□ -1.93
VPS33YLR396C RFC2P40348 353 aa3.01□□□□□ -1.93
VPS33YLR396C CAK1P43568 368 aaPredicted RBP3.01□□□□□ -1.93
VPS33YLR396C AZR1P50080 613 aa3.01□□□□□ -1.93
VPS33YLR396C EFM5P53200 248 aaKnown RBP3.01□□□□□ -1.93
VPS33YLR396C POP6P53218 158 aa3.01□□□□□ -1.93
VPS33YLR396C YGR168CP53293 376 aa3.01□□□□□ -1.93
VPS33YLR396C MSO1P53604 210 aaKnown RBP3.01□□□□□ -1.93
VPS33YLR396C WSC2P53832 503 aa3.01□□□□□ -1.93
VPS33YLR396C MRPS16Q02608 121 aa3.01□□□□□ -1.93
VPS33YLR396C IRC4Q03036 179 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 104.6 ms