RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C SLM1P40485 686 aa1.89□□□□□ -2.11
SHE2YKL130C SHQ1P40486 507 aaPredicted RBP1.89□□□□□ -2.11
SHE2YKL130C FMC1P40491 155 aa1.89□□□□□ -2.11
SHE2YKL130C YIA6P40556 373 aa1.89□□□□□ -2.11
SHE2YKL130C YAR1P46683 200 aa1.89□□□□□ -2.11
SHE2YKL130C UBC13P52490 153 aa1.89□□□□□ -2.11
SHE2YKL130C YGL039WP53183 348 aaKnown RBP1.89□□□□□ -2.11
SHE2YKL130C LSB1P53281 241 aa1.89□□□□□ -2.11
SHE2YKL130C CPD1P53314 239 aa1.89□□□□□ -2.11
SHE2YKL130C YNL134CP53912 376 aaKnown RBP1.89□□□□□ -2.11
SHE2YKL130C VAC7P53950 1165 aa1.89□□□□□ -2.11
SHE2YKL130C SRL4Q03085 281 aa1.89□□□□□ -2.11
SHE2YKL130C COX20Q04935 205 aa1.89□□□□□ -2.11
SHE2YKL130C FAR10Q06001 478 aa1.89□□□□□ -2.11
SHE2YKL130C BOP2Q06150 570 aa1.89□□□□□ -2.11
SHE2YKL130C YLR177WQ06251 628 aa1.89□□□□□ -2.11
SHE2YKL130C ARV1Q06541 321 aa1.89□□□□□ -2.11
SHE2YKL130C RPN8Q08723 338 aaKnown RBP1.89□□□□□ -2.11
SHE2YKL130C TY3A-GQ12173 290 aa1.89□□□□□ -2.11
SHE2YKL130C RBD2Q12270 262 aa1.89□□□□□ -2.11
SHE2YKL130C YPR064WQ12492 139 aa1.89□□□□□ -2.11
SHE2YKL130C TY3A-IQ99219 290 aa1.89□□□□□ -2.11
SHE2YKL130C ULS1Q08562 1619 aa1.88□□□□□ -2.11
SHE2YKL130C DNF2Q12675 1612 aa1.88□□□□□ -2.11
SHE2YKL130C SOD1P00445 154 aaKnown RBP1.88□□□□□ -2.11
SHE2YKL130C HIS1P00498 297 aaKnown RBP1.88□□□□□ -2.11
SHE2YKL130C RPS14AP06367 137 aaKnown RBP1.88□□□□□ -2.11
SHE2YKL130C RAD3P06839 778 aa1.88□□□□□ -2.11
SHE2YKL130C MRP1P10662 321 aaKnown RBP1.88□□□□□ -2.11
SHE2YKL130C SPS100P13130 326 aa1.88□□□□□ -2.11
SHE2YKL130C MET16P18408 261 aaPredicted RBP1.88□□□□□ -2.11
SHE2YKL130C ZRC1P20107 442 aa1.88□□□□□ -2.11
SHE2YKL130C CSE1P33307 960 aa1.88□□□□□ -2.11
SHE2YKL130C BMT2P38278 337 aa1.88□□□□□ -2.11
SHE2YKL130C OM14P38325 134 aa1.88□□□□□ -2.11
SHE2YKL130C YHR045WP38775 560 aa1.88□□□□□ -2.11
SHE2YKL130C CHL4P38907 458 aa1.88□□□□□ -2.11
SHE2YKL130C RPS14BP39516 138 aaKnown RBP1.88□□□□□ -2.11
SHE2YKL130C MIG3P39943 394 aa1.88□□□□□ -2.11
SHE2YKL130C UTP18P40362 594 aaPredicted RBP1.88□□□□□ -2.11
SHE2YKL130C GCN20P43535 752 aaKnown RBP1.88□□□□□ -2.11
SHE2YKL130C BNA6P43619 295 aa1.88□□□□□ -2.11
SHE2YKL130C YJL118WP47022 219 aa1.88□□□□□ -2.11
SHE2YKL130C TAD2P47058 250 aa1.88□□□□□ -2.11
SHE2YKL130C CDH1P53197 566 aa1.88□□□□□ -2.11
SHE2YKL130C YGR015CP53208 328 aa1.88□□□□□ -2.11
SHE2YKL130C RNH201P53942 307 aa1.88□□□□□ -2.11
SHE2YKL130C ALG11P53954 548 aaKnown RBP1.88□□□□□ -2.11
SHE2YKL130C PET117Q02771 107 aa1.88□□□□□ -2.11
SHE2YKL130C YMR209CQ03648 457 aa1.88□□□□□ -2.11
SHE2YKL130C GRX3Q03835 250 aa1.88□□□□□ -2.11
SHE2YKL130C ADH6Q04894 360 aaKnown RBP1.88□□□□□ -2.11
SHE2YKL130C YLR446WQ06204 433 aa1.88□□□□□ -2.11
SHE2YKL130C CTS2Q06350 511 aa1.88□□□□□ -2.11
SHE2YKL130C MHR1Q06630 226 aa1.88□□□□□ -2.11
SHE2YKL130C RRG7Q08774 242 aaPredicted RBP1.88□□□□□ -2.11
SHE2YKL130C POM33Q12164 279 aa1.88□□□□□ -2.11
SHE2YKL130C YPL245WQ12179 454 aaKnown RBP1.88□□□□□ -2.11
SHE2YKL130C WTM1Q12363 437 aaKnown RBP1.88□□□□□ -2.11
SHE2YKL130C TFC7Q12415 435 aa1.88□□□□□ -2.11
SHE2YKL130C YOR093CQ12275 1648 aa1.88□□□□□ -2.11
SHE2YKL130C GDB1Q06625 1536 aa1.87□□□□□ -2.11
SHE2YKL130C NTE1Q04958 1679 aa1.87□□□□□ -2.11
SHE2YKL130C ADH2P00331 348 aaKnown RBP1.87□□□□□ -2.11
SHE2YKL130C TFS1P14306 219 aa1.87□□□□□ -2.11
SHE2YKL130C RRT12P25381 491 aa1.87□□□□□ -2.11
SHE2YKL130C CWP1P28319 239 aa1.87□□□□□ -2.11
SHE2YKL130C ZIP1P31111 875 aa1.87□□□□□ -2.11
SHE2YKL130C IMP3P32899 183 aaPredicted RBP1.87□□□□□ -2.11
SHE2YKL130C CBF5P33322 483 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
SHE2YKL130C YBR241CP38142 488 aa1.87□□□□□ -2.11
SHE2YKL130C SHE1P38200 338 aa1.87□□□□□ -2.11
SHE2YKL130C SHE3P38272 425 aaKnown RBP1.87□□□□□ -2.11
SHE2YKL130C YPC1P38298 316 aa1.87□□□□□ -2.11
SHE2YKL130C EFM1P38732 585 aa1.87□□□□□ -2.11
SHE2YKL130C WSC4P38739 605 aa1.87□□□□□ -2.11
SHE2YKL130C TCD1P38756 429 aa1.87□□□□□ -2.11
SHE2YKL130C PFS1P38872 237 aa1.87□□□□□ -2.11
SHE2YKL130C BAT1P38891 393 aaKnown RBP1.87□□□□□ -2.11
SHE2YKL130C TIM17P39515 158 aa1.87□□□□□ -2.11
SHE2YKL130C COA1P40452 197 aa1.87□□□□□ -2.11
SHE2YKL130C GAB1P41733 394 aa1.87□□□□□ -2.11
SHE2YKL130C GDS1P41913 522 aa1.87□□□□□ -2.11
SHE2YKL130C YJR054WP47114 497 aa1.87□□□□□ -2.11
SHE2YKL130C TIS11P47977 285 aa1.87□□□□□ -2.11
SHE2YKL130C BIO3P50277 480 aa1.87□□□□□ -2.11
SHE2YKL130C YPT32P51996 222 aaKnown RBP1.87□□□□□ -2.11
SHE2YKL130C VHT1P53241 593 aa1.87□□□□□ -2.11
SHE2YKL130C NRM1P53718 249 aa1.87□□□□□ -2.11
SHE2YKL130C MRPL50P53724 139 aa1.87□□□□□ -2.11
SHE2YKL130C ENT5Q03769 411 aaKnown RBP1.87□□□□□ -2.11
SHE2YKL130C VBA1Q04301 562 aa1.87□□□□□ -2.11
SHE2YKL130C LIP2Q06005 328 aa1.87□□□□□ -2.11
SHE2YKL130C IRC20Q06554 1556 aa1.87□□□□□ -2.11
SHE2YKL130C SGT2Q12118 346 aaKnown RBP1.87□□□□□ -2.11
SHE2YKL130C RPL21BQ12672 160 aaKnown RBP1.87□□□□□ -2.11
SHE2YKL130C BI3Q9ZZW7 517 aa1.87□□□□□ -2.11
SHE2YKL130C SNQ2P32568 1501 aaKnown RBP1.86□□□□□ -2.11
SHE2YKL130C PDR12Q02785 1511 aa1.86□□□□□ -2.11
SHE2YKL130C CAT8P39113 1433 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms