RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W DEG1P31115 442 aaKnown RBP4.31□□□□□ -1.72
ABF1YKL112W PAD1P33751 242 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
ABF1YKL112W YKR078WP36158 585 aaKnown RBP4.31□□□□□ -1.72
ABF1YKL112W VBA2P38358 474 aaKnown RBP4.31□□□□□ -1.72
ABF1YKL112W MED6P38782 295 aa4.31□□□□□ -1.72
ABF1YKL112W COG3P40094 801 aa4.31□□□□□ -1.72
ABF1YKL112W YJL107CP42947 387 aa4.31□□□□□ -1.72
ABF1YKL112W YFL054CP43549 646 aa4.31□□□□□ -1.72
ABF1YKL112W MRX5P47007 382 aa4.31□□□□□ -1.72
ABF1YKL112W TPN1P53099 579 aa4.31□□□□□ -1.72
ABF1YKL112W YIP5P53108 310 aa4.31□□□□□ -1.72
ABF1YKL112W VPS73P53142 486 aaKnown RBP4.31□□□□□ -1.72
ABF1YKL112W COG7P53195 279 aa4.31□□□□□ -1.72
ABF1YKL112W FMP48P53233 369 aa4.31□□□□□ -1.72
ABF1YKL112W YPR003CP53394 754 aa4.31□□□□□ -1.72
ABF1YKL112W NUP49Q02199 472 aa4.31□□□□□ -1.72
ABF1YKL112W YPL077CQ02831 240 aa4.31□□□□□ -1.72
ABF1YKL112W IZH1Q03419 316 aa4.31□□□□□ -1.72
ABF1YKL112W RKM2Q03942 479 aa4.31□□□□□ -1.72
ABF1YKL112W TPO1Q07824 586 aa4.31□□□□□ -1.72
ABF1YKL112W RGT2Q12300 763 aa4.31□□□□□ -1.72
ABF1YKL112W TRM13Q12383 476 aa4.31□□□□□ -1.72
ABF1YKL112W RIB3Q99258 208 aa4.31□□□□□ -1.72
ABF1YKL112W UBA3Q99344 299 aa4.31□□□□□ -1.72
ABF1YKL112W CDC26P14724 124 aa4.31□□□□□ -1.72
ABF1YKL112W PRE1P22141 198 aaKnown RBP4.31□□□□□ -1.72
ABF1YKL112W OCH1P31755 480 aa4.31□□□□□ -1.72
ABF1YKL112W YPS1P32329 569 aa4.31□□□□□ -1.72
ABF1YKL112W ARP2P32381 391 aaKnown RBP4.31□□□□□ -1.72
ABF1YKL112W SCM4P32564 187 aa4.31□□□□□ -1.72
ABF1YKL112W FRE1P32791 686 aa4.31□□□□□ -1.72
ABF1YKL112W NAT2P37293 288 aa4.31□□□□□ -1.72
ABF1YKL112W RRN10P38204 145 aa4.31□□□□□ -1.72
ABF1YKL112W DHH1P39517 506 aaKnown RBP4.31□□□□□ -1.72
ABF1YKL112W EXO1P39875 702 aa4.31□□□□□ -1.72
ABF1YKL112W MAD2P40958 196 aa4.31□□□□□ -1.72
ABF1YKL112W AAD10P47182 288 aa4.31□□□□□ -1.72
ABF1YKL112W YPT32P51996 222 aaKnown RBP4.31□□□□□ -1.72
ABF1YKL112W DOC1P53068 250 aa4.31□□□□□ -1.72
ABF1YKL112W NIF3P53081 288 aa4.31□□□□□ -1.72
ABF1YKL112W YNL040WP53960 456 aaPredicted RBP4.31□□□□□ -1.72
ABF1YKL112W TIM8P57744 87 aa4.31□□□□□ -1.72
ABF1YKL112W SDH1Q00711 640 aa4.31□□□□□ -1.72
ABF1YKL112W YML096WQ04489 525 aa4.31□□□□□ -1.72
ABF1YKL112W YET3Q07451 203 aa4.31□□□□□ -1.72
ABF1YKL112W ADH2P00331 348 aaKnown RBP4.3□□□□□ -1.72
ABF1YKL112W YEL076C-AP0CX16 216 aa4.3□□□□□ -1.72
ABF1YKL112W YLR464WP0CX17 216 aa4.3□□□□□ -1.72
ABF1YKL112W RPL3P14126 387 aaKnown RBP4.3□□□□□ -1.72
ABF1YKL112W AHC2P25649 128 aa4.3□□□□□ -1.72
ABF1YKL112W CPR3P25719 182 aa4.3□□□□□ -1.72
ABF1YKL112W NRP1P32770 719 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
ABF1YKL112W UGP1P32861 499 aaKnown RBP4.3□□□□□ -1.72
ABF1YKL112W CMC1P36064 111 aa4.3□□□□□ -1.72
ABF1YKL112W YBR137WP38276 179 aa4.3□□□□□ -1.72
ABF1YKL112W VMA7P39111 118 aa4.3□□□□□ -1.72
ABF1YKL112W YEL076CP39971 216 aa4.3□□□□□ -1.72
ABF1YKL112W HNT2P49775 206 aa4.3□□□□□ -1.72
ABF1YKL112W EFM6P53970 246 aa4.3□□□□□ -1.72
ABF1YKL112W YCL001W-AP87012 153 aa4.3□□□□□ -1.72
ABF1YKL112W AIM34Q03673 198 aa4.3□□□□□ -1.72
ABF1YKL112W CTK1Q03957 528 aaKnown RBP4.3□□□□□ -1.72
ABF1YKL112W RPC11Q04307 110 aaPredicted RBP4.3□□□□□ -1.72
ABF1YKL112W GMC1Q04399 608 aa4.3□□□□□ -1.72
ABF1YKL112W ATG39Q06159 398 aa4.3□□□□□ -1.72
ABF1YKL112W SFH1Q06168 426 aa4.3□□□□□ -1.72
ABF1YKL112W ERF2Q06551 359 aa4.3□□□□□ -1.72
ABF1YKL112W CYK3Q07533 885 aa4.3□□□□□ -1.72
ABF1YKL112W YPL257WQ08974 193 aa4.3□□□□□ -1.72
ABF1YKL112W PRP46Q12417 451 aaPredicted RBP4.3□□□□□ -1.72
ABF1YKL112W YPR1Q12458 312 aa4.3□□□□□ -1.72
ABF1YKL112W YPT6Q99260 215 aa4.3□□□□□ -1.72
ABF1YKL112W HTS1P07263 546 aaKnown RBP4.3□□□□□ -1.72
ABF1YKL112W CCA1P21269 546 aa4.3□□□□□ -1.72
ABF1YKL112W SPO11P23179 398 aa4.3□□□□□ -1.72
ABF1YKL112W VAC17P25591 423 aa4.3□□□□□ -1.72
ABF1YKL112W SUA7P29055 345 aaPredicted RBP4.3□□□□□ -1.72
ABF1YKL112W CAT2P32796 670 aaKnown RBP4.3□□□□□ -1.72
ABF1YKL112W YKL162CP36052 402 aa4.3□□□□□ -1.72
ABF1YKL112W MRPL3P36516 390 aa4.3□□□□□ -1.72
ABF1YKL112W PLB1P39105 664 aa4.3□□□□□ -1.72
ABF1YKL112W SLS1P42900 643 aa4.3□□□□□ -1.72
ABF1YKL112W SWC4P53201 476 aa4.3□□□□□ -1.72
ABF1YKL112W YMR160WQ03823 816 aa4.3□□□□□ -1.72
ABF1YKL112W NAT4Q04751 285 aa4.3□□□□□ -1.72
ABF1YKL112W FSF1Q12029 327 aaKnown RBP4.3□□□□□ -1.72
ABF1YKL112W TY1A-BLQ12266 440 aa4.3□□□□□ -1.72
ABF1YKL112W RRI1Q12468 440 aa4.3□□□□□ -1.72
ABF1YKL112W PHO2P07269 559 aa4.29□□□□□ -1.72
ABF1YKL112W GCY1P14065 312 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
ABF1YKL112W HEM15P16622 393 aa4.29□□□□□ -1.72
ABF1YKL112W SPO7P18410 259 aa4.29□□□□□ -1.72
ABF1YKL112W PEX4P29340 183 aa4.29□□□□□ -1.72
ABF1YKL112W UTR2P32623 467 aa4.29□□□□□ -1.72
ABF1YKL112W YPT31P38555 223 aaKnown RBP4.29□□□□□ -1.72
ABF1YKL112W RCK1P38622 512 aa4.29□□□□□ -1.72
ABF1YKL112W COS8P38723 381 aa4.29□□□□□ -1.72
ABF1YKL112W RPF1P38805 295 aaKnown RBP4.29□□□□□ -1.72
ABF1YKL112W IKI1P38874 309 aa4.29□□□□□ -1.72
ABF1YKL112W RRG9P40156 214 aa4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms