RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W YPR127WQ06494 345 aa5.63□□□□□ -1.51
MDH1YKL085W VPS36Q06696 566 aa5.63□□□□□ -1.51
MDH1YKL085W SNA4Q07549 140 aa5.63□□□□□ -1.51
MDH1YKL085W FIT3Q08907 204 aa5.63□□□□□ -1.51
MDH1YKL085W HMS1Q12398 434 aa5.63□□□□□ -1.51
MDH1YKL085W YOL163WP0CF20 169 aa5.62□□□□□ -1.51
MDH1YKL085W RPS16AP0CX51 143 aaKnown RBP5.62□□□□□ -1.51
MDH1YKL085W RPS16BP0CX52 143 aaKnown RBP5.62□□□□□ -1.51
MDH1YKL085W UGA1P17649 471 aa5.62□□□□□ -1.51
MDH1YKL085W NUP1P20676 1076 aa5.62□□□□□ -1.51
MDH1YKL085W DBF2P22204 572 aa5.62□□□□□ -1.51
MDH1YKL085W GIT1P25346 518 aa5.62□□□□□ -1.51
MDH1YKL085W CAM1P29547 415 aaKnown RBP5.62□□□□□ -1.51
MDH1YKL085W SNC1P31109 117 aa5.62□□□□□ -1.51
MDH1YKL085W MNS1P32906 549 aa5.62□□□□□ -1.51
MDH1YKL085W MPM1P40364 252 aa5.62□□□□□ -1.51
MDH1YKL085W YNR062CP53748 327 aa5.62□□□□□ -1.51
MDH1YKL085W TPS1Q00764 495 aaKnown RBP5.62□□□□□ -1.51
MDH1YKL085W SEC13Q04491 297 aaKnown RBP5.62□□□□□ -1.51
MDH1YKL085W DYN3Q04949 312 aa5.62□□□□□ -1.51
MDH1YKL085W GGA1Q06336 557 aa5.62□□□□□ -1.51
MDH1YKL085W YPL191CQ08930 360 aa5.62□□□□□ -1.51
MDH1YKL085W SFM1Q12314 213 aa5.62□□□□□ -1.51
MDH1YKL085W MSS18P08593 268 aa5.61□□□□□ -1.51
MDH1YKL085W GSH1P32477 678 aa5.61□□□□□ -1.51
MDH1YKL085W SPT10P35208 640 aa5.61□□□□□ -1.51
MDH1YKL085W JEN1P36035 616 aa5.61□□□□□ -1.51
MDH1YKL085W GDI1P39958 451 aaKnown RBP5.61□□□□□ -1.51
MDH1YKL085W YER188WP40103 239 aa5.61□□□□□ -1.51
MDH1YKL085W IRC7P43623 340 aa5.61□□□□□ -1.51
MDH1YKL085W BRR6P53062 197 aa5.61□□□□□ -1.51
MDH1YKL085W SKI7Q08491 747 aaPredicted RBP5.61□□□□□ -1.51
MDH1YKL085W YPR202WQ08993 238 aa5.61□□□□□ -1.51
MDH1YKL085W WTM1Q12363 437 aaKnown RBP5.61□□□□□ -1.51
MDH1YKL085W CNA1P23287 553 aa5.6□□□□□ -1.51
MDH1YKL085W SED4P25365 1065 aa5.6□□□□□ -1.51
MDH1YKL085W RHB1P25378 209 aa5.6□□□□□ -1.51
MDH1YKL085W RPS5P26783 225 aaKnown RBP5.6□□□□□ -1.51
MDH1YKL085W RPN2P32565 945 aaKnown RBP5.6□□□□□ -1.51
MDH1YKL085W CLB6P32943 380 aa5.6□□□□□ -1.51
MDH1YKL085W YKL071WP36086 256 aa5.6□□□□□ -1.51
MDH1YKL085W SHM2P37291 469 aaKnown RBP5.6□□□□□ -1.51
MDH1YKL085W RFC3P38629 340 aa5.6□□□□□ -1.51
MDH1YKL085W RCY1P39531 840 aa5.6□□□□□ -1.51
MDH1YKL085W YIL166CP40445 542 aa5.6□□□□□ -1.51
MDH1YKL085W NAS2P40555 220 aa5.6□□□□□ -1.51
MDH1YKL085W GLR1P41921 483 aaKnown RBP5.6□□□□□ -1.51
MDH1YKL085W GCN20P43535 752 aaKnown RBP5.6□□□□□ -1.51
MDH1YKL085W DPB11P47027 764 aaPredicted RBP5.6□□□□□ -1.51
MDH1YKL085W ABM1P47146 123 aa5.6□□□□□ -1.51
MDH1YKL085W UBC13P52490 153 aa5.6□□□□□ -1.51
MDH1YKL085W YKR011CQ02209 353 aa5.6□□□□□ -1.51
MDH1YKL085W YMR279CQ03263 540 aa5.6□□□□□ -1.51
MDH1YKL085W RVB1Q03940 463 aaKnown RBP5.6□□□□□ -1.51
MDH1YKL085W YLR346CQ06139 101 aa5.6□□□□□ -1.51
MDH1YKL085W CTS2Q06350 511 aa5.6□□□□□ -1.51
MDH1YKL085W THP1Q08231 455 aa5.6□□□□□ -1.51
MDH1YKL085W HRT1Q08273 121 aa5.6□□□□□ -1.51
MDH1YKL085W RIB2Q12362 591 aaKnown RBP5.6□□□□□ -1.51
MDH1YKL085W YDL199CQ12407 687 aa5.6□□□□□ -1.51
MDH1YKL085W ERP4Q12450 207 aa5.6□□□□□ -1.51
MDH1YKL085W RPS23AP0CX29 145 aaKnown RBP5.59□□□□□ -1.51
MDH1YKL085W RPS23BP0CX30 145 aa5.59□□□□□ -1.51
MDH1YKL085W MSI1P13712 422 aa5.59□□□□□ -1.51
MDH1YKL085W ERG4P25340 473 aa5.59□□□□□ -1.51
MDH1YKL085W PPA2P28239 310 aa5.59□□□□□ -1.51
MDH1YKL085W MDH3P32419 343 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
MDH1YKL085W CUE2P36075 443 aaKnown RBP5.59□□□□□ -1.51
MDH1YKL085W SRO77P38163 1010 aa5.59□□□□□ -1.51
MDH1YKL085W QRI7P43122 407 aa5.59□□□□□ -1.51
MDH1YKL085W YFL066CP43538 392 aa5.59□□□□□ -1.51
MDH1YKL085W YIP5P53108 310 aa5.59□□□□□ -1.51
MDH1YKL085W COG2P53271 262 aa5.59□□□□□ -1.51
MDH1YKL085W TNA1P53322 534 aa5.59□□□□□ -1.51
MDH1YKL085W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
MDH1YKL085W TY1A-BLQ12266 440 aa5.59□□□□□ -1.51
MDH1YKL085W IZH2Q12442 317 aa5.59□□□□□ -1.51
MDH1YKL085W RTN2Q12443 393 aa5.59□□□□□ -1.51
MDH1YKL085W MRX4Q12467 430 aa5.59□□□□□ -1.51
MDH1YKL085W FSH3Q99369 266 aa5.59□□□□□ -1.51
MDH1YKL085W PET9P18239 318 aaKnown RBP5.58□□□□□ -1.52
MDH1YKL085W YCL002CP25565 263 aa5.58□□□□□ -1.52
MDH1YKL085W IDH1P28834 360 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
MDH1YKL085W PRE2P30656 287 aaKnown RBP5.58□□□□□ -1.52
MDH1YKL085W VMA11P32842 164 aa5.58□□□□□ -1.52
MDH1YKL085W PAD1P33751 242 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
MDH1YKL085W YHR218WP38899 603 aa5.58□□□□□ -1.52
MDH1YKL085W MRX1P40050 688 aa5.58□□□□□ -1.52
MDH1YKL085W YER121WP40076 114 aa5.58□□□□□ -1.52
MDH1YKL085W USE1P53146 245 aa5.58□□□□□ -1.52
MDH1YKL085W YNL033WP53964 284 aa5.58□□□□□ -1.52
MDH1YKL085W YNL019CP53975 284 aa5.58□□□□□ -1.52
MDH1YKL085W PET191Q02772 108 aa5.58□□□□□ -1.52
MDH1YKL085W LRS4Q04087 347 aaKnown RBP5.58□□□□□ -1.52
MDH1YKL085W SNT309Q06091 175 aaPredicted RBP5.58□□□□□ -1.52
MDH1YKL085W PSR1Q07800 427 aa5.58□□□□□ -1.52
MDH1YKL085W MIM1Q08176 113 aa5.58□□□□□ -1.52
MDH1YKL085W MUM3Q08750 479 aa5.58□□□□□ -1.52
MDH1YKL085W YPL225WQ08971 146 aaKnown RBP5.58□□□□□ -1.52
MDH1YKL085W FRE8Q12209 686 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms