RNA–Protein interactions for RNA: YKL054C

DEF1, Transcript of RNAPII degradation factor, yeastyeast

Gene DEF1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEF1YKL054C TRM5P38793 499 aa5.26□□□□□ -1.57
DEF1YKL054C TES1P41903 349 aaKnown RBP5.26□□□□□ -1.57
DEF1YKL054C YJL043WP47053 257 aa5.26□□□□□ -1.57
DEF1YKL054C PRM6Q04705 352 aa5.26□□□□□ -1.57
DEF1YKL054C ARC18Q05933 178 aaKnown RBP5.26□□□□□ -1.57
DEF1YKL054C SLM3Q12093 417 aa5.26□□□□□ -1.57
DEF1YKL054C IZH4Q99393 312 aa5.26□□□□□ -1.57
DEF1YKL054C NUF2P33895 451 aa5.25□□□□□ -1.57
DEF1YKL054C YOX1P34161 385 aa5.25□□□□□ -1.57
DEF1YKL054C VAB2P40003 282 aa5.25□□□□□ -1.57
DEF1YKL054C COG3P40094 801 aa5.25□□□□□ -1.57
DEF1YKL054C AGE2P40529 298 aa5.25□□□□□ -1.57
DEF1YKL054C RRT5P43607 289 aa5.25□□□□□ -1.57
DEF1YKL054C CTL1Q03220 320 aaKnown RBP5.25□□□□□ -1.57
DEF1YKL054C SFH1Q06168 426 aa5.25□□□□□ -1.57
DEF1YKL054C AIM39Q08223 395 aa5.25□□□□□ -1.57
DEF1YKL054C TUB1P09733 447 aaKnown RBP5.25□□□□□ -1.57
DEF1YKL054C CDC10P25342 322 aaKnown RBP5.25□□□□□ -1.57
DEF1YKL054C CTS1P29029 562 aa5.25□□□□□ -1.57
DEF1YKL054C TPS2P31688 896 aaKnown RBP5.25□□□□□ -1.57
DEF1YKL054C MUD1P32605 298 aaKnown RBP5.25□□□□□ -1.57
DEF1YKL054C SRP14P38985 146 aa5.25□□□□□ -1.57
DEF1YKL054C USE1P53146 245 aa5.25□□□□□ -1.57
DEF1YKL054C VHT1P53241 593 aa5.25□□□□□ -1.57
DEF1YKL054C RNY1Q02933 434 aaKnown RBP5.25□□□□□ -1.57
DEF1YKL054C CCE1Q03702 353 aa5.25□□□□□ -1.57
DEF1YKL054C LOA1Q06508 300 aa5.25□□□□□ -1.57
DEF1YKL054C TIM18Q08749 192 aa5.25□□□□□ -1.57
DEF1YKL054C EXO70P19658 623 aa5.24□□□□□ -1.57
DEF1YKL054C PHO80P20052 293 aa5.24□□□□□ -1.57
DEF1YKL054C YJR012CP47087 207 aa5.24□□□□□ -1.57
DEF1YKL054C NBP35P52920 328 aa5.24□□□□□ -1.57
DEF1YKL054C JAC1P53193 184 aa5.24□□□□□ -1.57
DEF1YKL054C TRM44Q02648 567 aaKnown RBP5.24□□□□□ -1.57
DEF1YKL054C CTR3Q06686 241 aa5.24□□□□□ -1.57
DEF1YKL054C BSC1Q12140 328 aa5.24□□□□□ -1.57
DEF1YKL054C ARP6Q12509 438 aa5.24□□□□□ -1.57
DEF1YKL054C PUT1P09368 476 aa5.24□□□□□ -1.57
DEF1YKL054C CHA1P25379 360 aaKnown RBP5.24□□□□□ -1.57
DEF1YKL054C CPR3P25719 182 aa5.24□□□□□ -1.57
DEF1YKL054C SPT4P32914 102 aaPredicted RBP5.24□□□□□ -1.57
DEF1YKL054C VPS52P39904 641 aa5.24□□□□□ -1.57
DEF1YKL054C PRE6P40303 254 aaKnown RBP5.24□□□□□ -1.57
DEF1YKL054C YJR030CP47101 745 aa5.24□□□□□ -1.57
DEF1YKL054C SWS2P53937 143 aa5.24□□□□□ -1.57
DEF1YKL054C ECM11Q04110 302 aa5.24□□□□□ -1.57
DEF1YKL054C YNG1Q08465 219 aa5.24□□□□□ -1.57
DEF1YKL054C RDL2Q08742 149 aaKnown RBP5.24□□□□□ -1.57
DEF1YKL054C RIO1Q12196 484 aaKnown RBP5.24□□□□□ -1.57
DEF1YKL054C RPL16BP26785 198 aaKnown RBP5.23□□□□□ -1.57
DEF1YKL054C PMT2P31382 759 aa5.23□□□□□ -1.57
DEF1YKL054C PHA2P32452 334 aa5.23□□□□□ -1.57
DEF1YKL054C KAR9P32526 644 aa5.23□□□□□ -1.57
DEF1YKL054C SGE1P33335 543 aa5.23□□□□□ -1.57
DEF1YKL054C JEN1P36035 616 aa5.23□□□□□ -1.57
DEF1YKL054C MST28P39552 234 aa5.23□□□□□ -1.57
DEF1YKL054C TPN1P53099 579 aa5.23□□□□□ -1.57
DEF1YKL054C YMR027WQ04371 470 aa5.23□□□□□ -1.57
DEF1YKL054C YPL199CQ08954 240 aa5.23□□□□□ -1.57
DEF1YKL054C YOR114WQ12219 294 aa5.23□□□□□ -1.57
DEF1YKL054C PNS1Q12412 539 aa5.23□□□□□ -1.57
DEF1YKL054C YAR066WP0CX18 203 aa5.23□□□□□ -1.57
DEF1YKL054C YHR214WP0CX19 203 aa5.23□□□□□ -1.57
DEF1YKL054C YAP1P19880 650 aaKnown RBP5.23□□□□□ -1.57
DEF1YKL054C SRP102P36057 244 aaPredicted RBP5.23□□□□□ -1.57
DEF1YKL054C CUE1P38428 203 aa5.23□□□□□ -1.57
DEF1YKL054C JLP2P40206 208 aa5.23□□□□□ -1.57
DEF1YKL054C RSM25P40496 264 aa5.23□□□□□ -1.57
DEF1YKL054C GAT1P43574 510 aa5.23□□□□□ -1.57
DEF1YKL054C SFH5P47008 294 aa5.23□□□□□ -1.57
DEF1YKL054C MRM2P53123 320 aa5.23□□□□□ -1.57
DEF1YKL054C PEX31P53203 462 aa5.23□□□□□ -1.57
DEF1YKL054C MSO1P53604 210 aaKnown RBP5.23□□□□□ -1.57
DEF1YKL054C BCH1Q05029 724 aa5.23□□□□□ -1.57
DEF1YKL054C DXO1Q06349 442 aa5.23□□□□□ -1.57
DEF1YKL054C SPT3P06844 337 aa5.22□□□□□ -1.57
DEF1YKL054C SEN2P16658 377 aa5.22□□□□□ -1.57
DEF1YKL054C CPT1P17898 393 aa5.22□□□□□ -1.57
DEF1YKL054C YCR087C-AP37263 153 aa5.22□□□□□ -1.57
DEF1YKL054C YBR137WP38276 179 aa5.22□□□□□ -1.57
DEF1YKL054C SDS24P38314 527 aa5.22□□□□□ -1.57
DEF1YKL054C MRPL49P40858 161 aaPredicted RBP5.22□□□□□ -1.57
DEF1YKL054C CIN2P46670 268 aa5.22□□□□□ -1.57
DEF1YKL054C GWT1P47026 490 aa5.22□□□□□ -1.57
DEF1YKL054C IRC18P47056 224 aa5.22□□□□□ -1.57
DEF1YKL054C OST3P48439 350 aa5.22□□□□□ -1.57
DEF1YKL054C NUP57P48837 541 aa5.22□□□□□ -1.57
DEF1YKL054C PRP24P49960 444 aaKnown RBP5.22□□□□□ -1.57
DEF1YKL054C SWC4P53201 476 aa5.22□□□□□ -1.57
DEF1YKL054C IRC15Q02733 499 aa5.22□□□□□ -1.57
DEF1YKL054C BSP1Q06604 576 aa5.22□□□□□ -1.57
DEF1YKL054C YET3Q07451 203 aa5.22□□□□□ -1.57
DEF1YKL054C RPL20AP0CX23 172 aaKnown RBP5.21□□□□□ -1.57
DEF1YKL054C RPL20BP0CX24 172 aaPredicted RBP5.21□□□□□ -1.57
DEF1YKL054C TRR1P29509 319 aaKnown RBP5.21□□□□□ -1.57
DEF1YKL054C GUF1P46943 645 aa5.21□□□□□ -1.57
DEF1YKL054C DDC1Q08949 612 aa5.21□□□□□ -1.57
DEF1YKL054C USB1Q12208 290 aaKnown RBP5.21□□□□□ -1.57
DEF1YKL054C UTP23Q12339 254 aaKnown RBP5.21□□□□□ -1.57
DEF1YKL054C YCR022CP25620 114 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms