RNA–Protein interactions for RNA: YGR240C

PFK1, Transcript of Alpha subunit of heterooctameric phosphofructokinase, yeast

Gene PFK1, Length 2,964 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PFK1	YGR240C	SPS4	P09937	338 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	CNB1	P25296	175 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	MUD1	P32605	298 aa	Known RBP	4.06	□□□□□ -1.76
PFK1	YGR240C	YBR144C	P34215	104 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	BNA4	P38169	460 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	EFM1	P38732	585 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	YFL054C	P43549	646 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	YJR030C	P47101	745 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	ADO1	P47143	340 aa	Known RBP	4.06	□□□□□ -1.76
PFK1	YGR240C	MGA1	P53050	456 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	YGR017W	P53210	297 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	YKR011C	Q02209	353 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	GIP3	Q03016	1276 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	NHP10	Q03435	203 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	PRM6	Q04705	352 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	SSK1	Q07084	712 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	BUD20	Q08004	166 aa	Predicted RBP	4.06	□□□□□ -1.76
PFK1	YGR240C	MLH3	Q12083	715 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	YOP1	Q12402	180 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	LRE1	P25579	583 aa	Known RBP	4.06	□□□□□ -1.76
PFK1	YGR240C	SUA7	P29055	345 aa	Predicted RBP	4.06	□□□□□ -1.76
PFK1	YGR240C	CAT2	P32796	670 aa	Known RBP	4.06	□□□□□ -1.76
PFK1	YGR240C	YKL162C	P36052	402 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	SWP82	P43554	623 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	YNR040W	P53736	256 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	ASI2	P53895	289 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	NRK1	P53915	240 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	CCE1	Q03702	353 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	COA4	Q05809	96 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	TPO4	Q12256	659 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	MRX4	Q12467	430 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	PSF1	Q12488	208 aa		4.06	□□□□□ -1.76
PFK1	YGR240C	MES1	P00958	751 aa	Known RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	RPL31B	P0C2H9	113 aa	Known RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	YGL041W-A	P0C5N3	154 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	YSP3	P25036	478 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	GAC1	P28006	793 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
PFK1	YGR240C	SGE1	P33335	543 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	QDR3	P38227	689 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	SSN3	P39073	555 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	FMP52	P40008	231 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	COG3	P40094	801 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	RRG9	P40156	214 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	ASN1	P49089	572 aa	Known RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	YGR168C	P53293	376 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	RSM23	Q01163	450 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	HNT3	Q08702	217 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	YOR214C	Q12282	236 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	TRM13	Q12383	476 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	RDI1	Q12434	202 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	YML003W	P0CF16	290 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	ACH1	P32316	526 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	RTG1	P32607	177 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	NVJ1	P38881	321 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	TIF11	P38912	153 aa	Known RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	PHO90	P39535	881 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	YAR028W	P39548	234 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	STB1	P42845	420 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	YJR011C	P47086	261 aa	Predicted RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	LSM8	P47093	109 aa	Known RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	SCS3	P53012	380 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	RPL22B	P56628	122 aa	Known RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	SED5	Q01590	340 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	BER1	Q06688	274 aa	Known RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	MRX9	Q07349	420 aa	Known RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	YOR387C	Q08910	206 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	HIS1	P00498	297 aa	Known RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	TYR1	P20049	452 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	SLY1	P22213	666 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	PHA2	P32452	334 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	CYS4	P32582	507 aa	Known RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	YHR078W	P38799	552 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	UIP3	P39547	235 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	YIL108W	P40483	696 aa	Known RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	GVP36	P40531	326 aa	Known RBP	4.05	□□□□□ -1.76
PFK1	YGR240C	PAC11	P40960	533 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	IDP2	P41939	412 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	AVT1	P47082	602 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	BIO4	P53630	237 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	YDR018C	Q12185	396 aa		4.05	□□□□□ -1.76
PFK1	YGR240C	CHO1	P08456	276 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	YPK1	P12688	680 aa	Known RBP	4.04	□□□□□ -1.76
PFK1	YGR240C	SNF5	P18480	905 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	MCK1	P21965	375 aa	Known RBP	4.04	□□□□□ -1.76
PFK1	YGR240C	SEC22	P22214	214 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	GDA1	P32621	518 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	UGX2	P32772	223 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	TRM2	P33753	639 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	IMD2	P38697	523 aa	Known RBP	4.04	□□□□□ -1.76
PFK1	YGR240C	AIM18	P38884	321 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	ELO1	P39540	310 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	PFA3	P42836	336 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	FAR7	P43592	221 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	COS12	P53053	380 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	VEL1	P53058	206 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	SIZ1	Q04195	904 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	YIR021W-A	Q3E739	70 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	CDC7	P06243	507 aa		4.04	□□□□□ -1.76
PFK1	YGR240C	RPS1B	P23248	255 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms