RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W ZRT1P32804 376 aa1.81□□□□□ -2.12
VMA21YGR105W YKL162CP36052 402 aa1.81□□□□□ -2.12
VMA21YGR105W YBL081WP38180 368 aaKnown RBP1.81□□□□□ -2.12
VMA21YGR105W YIL012WP40551 113 aa1.81□□□□□ -2.12
VMA21YGR105W ARC18Q05933 178 aaKnown RBP1.81□□□□□ -2.12
VMA21YGR105W LAG2Q92325 660 aa1.81□□□□□ -2.12
VMA21YGR105W YOL163WP0CF20 169 aa1.8□□□□□ -2.12
VMA21YGR105W MRPL6P32904 214 aa1.8□□□□□ -2.12
VMA21YGR105W OSH6Q02201 448 aa1.8□□□□□ -2.12
VMA21YGR105W STE23Q06010 1027 aa1.8□□□□□ -2.12
VMA21YGR105W PEX30Q06169 523 aa1.8□□□□□ -2.12
VMA21YGR105W YLR446WQ06204 433 aa1.8□□□□□ -2.12
VMA21YGR105W UTP23Q12339 254 aaKnown RBP1.8□□□□□ -2.12
VMA21YGR105W YPS1P32329 569 aa1.79□□□□□ -2.12
VMA21YGR105W VPH2P32341 215 aa1.79□□□□□ -2.12
VMA21YGR105W CDC13P32797 924 aaKnown RBP1.79□□□□□ -2.12
VMA21YGR105W ATG12P38316 186 aa1.79□□□□□ -2.12
VMA21YGR105W YHR035WP38769 630 aa1.79□□□□□ -2.12
VMA21YGR105W PCL7P40186 285 aa1.79□□□□□ -2.12
VMA21YGR105W INA22P40576 216 aa1.79□□□□□ -2.12
VMA21YGR105W SYS1P41544 203 aa1.79□□□□□ -2.12
VMA21YGR105W DCP1Q12517 231 aaPredicted RBP1.79□□□□□ -2.12
VMA21YGR105W VPS1P21576 704 aaKnown RBP1.78□□□□□ -2.12
VMA21YGR105W VPH1P32563 840 aaKnown RBP1.78□□□□□ -2.12
VMA21YGR105W MCH2P36032 473 aa1.78□□□□□ -2.12
VMA21YGR105W YPC1P38298 316 aa1.78□□□□□ -2.12
VMA21YGR105W YHL044WP38727 235 aa1.78□□□□□ -2.12
VMA21YGR105W UTP25P40498 721 aaKnown RBP1.78□□□□□ -2.12
VMA21YGR105W YFL064CP43540 174 aa1.78□□□□□ -2.12
VMA21YGR105W OKP1P53298 406 aa1.78□□□□□ -2.12
VMA21YGR105W YNL095CP53932 642 aa1.78□□□□□ -2.12
VMA21YGR105W SAM4Q08985 325 aaKnown RBP1.78□□□□□ -2.12
VMA21YGR105W TPO5P36029 618 aa1.77□□□□□ -2.13
VMA21YGR105W UIP5P36137 443 aa1.77□□□□□ -2.13
VMA21YGR105W PRP24P49960 444 aaKnown RBP1.77□□□□□ -2.13
VMA21YGR105W MIG2P53035 382 aa1.77□□□□□ -2.13
VMA21YGR105W SYF2P53277 215 aaPredicted RBP1.77□□□□□ -2.13
VMA21YGR105W PBP4Q07362 185 aaKnown RBP1.77□□□□□ -2.13
VMA21YGR105W PRR2Q12310 699 aa1.77□□□□□ -2.13
VMA21YGR105W TIM22Q12328 207 aa1.77□□□□□ -2.13
VMA21YGR105W PFK27Q12471 397 aaPredicted RBP1.77□□□□□ -2.13
VMA21YGR105W IMP1P28627 190 aa1.76□□□□□ -2.13
VMA21YGR105W SWI3P32591 825 aa1.76□□□□□ -2.13
VMA21YGR105W PES4P39684 611 aa1.76□□□□□ -2.13
VMA21YGR105W AIM20P40451 204 aa1.76□□□□□ -2.13
VMA21YGR105W LIF1P53150 421 aa1.76□□□□□ -2.13
VMA21YGR105W ALG9P53868 555 aaKnown RBP1.76□□□□□ -2.13
VMA21YGR105W BEM2P39960 2167 aaKnown RBP1.76□□□□□ -2.13
VMA21YGR105W IMP3P32899 183 aaPredicted RBP1.75□□□□□ -2.13
VMA21YGR105W CAB3P36076 571 aa1.75□□□□□ -2.13
VMA21YGR105W MRPL3P36516 390 aa1.75□□□□□ -2.13
VMA21YGR105W YGP1P38616 354 aaKnown RBP1.75□□□□□ -2.13
VMA21YGR105W FET3P38993 636 aa1.75□□□□□ -2.13
VMA21YGR105W VAB2P40003 282 aa1.75□□□□□ -2.13
VMA21YGR105W PIR5P46999 287 aa1.75□□□□□ -2.13
VMA21YGR105W YGR266WP53326 701 aa1.75□□□□□ -2.13
VMA21YGR105W YMR111CQ04461 462 aaPredicted RBP1.75□□□□□ -2.13
VMA21YGR105W NNT1Q05874 261 aa1.75□□□□□ -2.13
VMA21YGR105W PHO80P20052 293 aa1.74□□□□□ -2.13
VMA21YGR105W IFM1P25038 676 aa1.74□□□□□ -2.13
VMA21YGR105W RPL16BP26785 198 aaKnown RBP1.74□□□□□ -2.13
VMA21YGR105W GCG1P32656 232 aaKnown RBP1.74□□□□□ -2.13
VMA21YGR105W UBC13P52490 153 aa1.74□□□□□ -2.13
VMA21YGR105W SSU72P53538 206 aaPredicted RBP1.74□□□□□ -2.13
VMA21YGR105W CAB5Q03941 241 aa1.74□□□□□ -2.13
VMA21YGR105W PAA1Q12447 191 aaKnown RBP1.74□□□□□ -2.13
VMA21YGR105W YPR1Q12458 312 aa1.74□□□□□ -2.13
VMA21YGR105W SPT7P35177 1332 aa1.73□□□□□ -2.13
VMA21YGR105W HIS3P06633 220 aa1.73□□□□□ -2.13
VMA21YGR105W SWC5P38326 303 aa1.73□□□□□ -2.13
VMA21YGR105W KRE29P40026 464 aa1.73□□□□□ -2.13
VMA21YGR105W AVT6P40074 448 aa1.73□□□□□ -2.13
VMA21YGR105W MNN5P46982 586 aa1.73□□□□□ -2.13
VMA21YGR105W TPN1P53099 579 aa1.73□□□□□ -2.13
VMA21YGR105W SWC4P53201 476 aa1.73□□□□□ -2.13
VMA21YGR105W MRS2Q01926 470 aa1.73□□□□□ -2.13
VMA21YGR105W YDR286CQ05530 114 aa1.73□□□□□ -2.13
VMA21YGR105W RDS3Q06835 107 aaPredicted RBP1.73□□□□□ -2.13
VMA21YGR105W CDC37P06101 506 aaKnown RBP1.72□□□□□ -2.13
VMA21YGR105W RPL31AP0C2H8 113 aaKnown RBP1.72□□□□□ -2.13
VMA21YGR105W TRM7P38238 310 aaKnown RBP1.72□□□□□ -2.13
VMA21YGR105W MBA1P38300 278 aa1.72□□□□□ -2.13
VMA21YGR105W END3P39013 349 aa1.72□□□□□ -2.13
VMA21YGR105W AVT7P40501 490 aa1.72□□□□□ -2.13
VMA21YGR105W RSM27P53305 110 aa1.72□□□□□ -2.13
VMA21YGR105W TAZ1Q06510 381 aa1.72□□□□□ -2.13
VMA21YGR105W YDL144CQ07589 356 aa1.72□□□□□ -2.13
VMA21YGR105W ATG5Q12380 294 aa1.72□□□□□ -2.13
VMA21YGR105W IZH4Q99393 312 aa1.72□□□□□ -2.13
VMA21YGR105W BLI1P35727 113 aa1.71□□□□□ -2.14
VMA21YGR105W GDS1P41913 522 aa1.71□□□□□ -2.14
VMA21YGR105W BIO4P53630 237 aa1.71□□□□□ -2.14
VMA21YGR105W SWT21P53873 357 aaPredicted RBP1.71□□□□□ -2.14
VMA21YGR105W APC9Q12107 265 aa1.71□□□□□ -2.14
VMA21YGR105W RAD7P06779 565 aa1.7□□□□□ -2.14
VMA21YGR105W GAL7P08431 366 aa1.7□□□□□ -2.14
VMA21YGR105W ZWF1P11412 505 aaKnown RBP1.7□□□□□ -2.14
VMA21YGR105W DSK2P48510 373 aa1.7□□□□□ -2.14
VMA21YGR105W TVP15Q03860 143 aa1.7□□□□□ -2.14
VMA21YGR105W PLB3Q08108 686 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 95.2 ms