RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDR1	YGR100W	ASH1	P34233	588 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	MRPL11	P36521	249 aa	Predicted RBP	4.26	□□□□□ -1.73
MDR1	YGR100W	AXL2	P38928	823 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	RMD8	P43620	662 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	ASN1	P49089	572 aa	Known RBP	4.26	□□□□□ -1.73
MDR1	YGR100W	AVT4	P50944	713 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	ACS2	P52910	683 aa	Known RBP	4.26	□□□□□ -1.73
MDR1	YGR100W	NCS6	P53088	359 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	YGR035C	P53222	116 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	YAP1802	P53309	568 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	BRE5	P53741	515 aa	Known RBP	4.26	□□□□□ -1.73
MDR1	YGR100W	CUE4	Q04201	117 aa	Predicted RBP	4.26	□□□□□ -1.73
MDR1	YGR100W	TMN2	Q04562	672 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	YTM1	Q12024	460 aa	Predicted RBP	4.26	□□□□□ -1.73
MDR1	YGR100W	YDL176W	Q12027	708 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	YLR049C	Q12110	428 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	TMS1	Q12116	473 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	MDY2	Q12285	212 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	CDC42	P19073	191 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	RMA1	P36001	430 aa	Known RBP	4.26	□□□□□ -1.73
MDR1	YGR100W	ASC1	P38011	319 aa	Known RBP	4.26	□□□□□ -1.73
MDR1	YGR100W	RIB1	P38066	345 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	FLR1	P38124	548 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	SFB3	P38810	929 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	GCV3	P39726	170 aa	Predicted RBP	4.26	□□□□□ -1.73
MDR1	YGR100W	SPO73	P40031	143 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	YIL152W	P40455	235 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	GWT1	P47026	490 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	HMS2	P47175	358 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	ALT2	P52892	507 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	BUD9	P53226	547 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	FMP41	P53889	259 aa	Known RBP	4.26	□□□□□ -1.73
MDR1	YGR100W	NRK1	P53915	240 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	RCR2	Q03446	210 aa	Known RBP	4.26	□□□□□ -1.73
MDR1	YGR100W	SPC19	Q03954	165 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	YDR444W	Q04093	687 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	NAT5	Q08689	176 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	TMA17	Q12513	150 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	YNR034W-A	Q3E841	98 aa		4.26	□□□□□ -1.73
MDR1	YGR100W	NHP6B	P11633	99 aa	Known RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	YCR090C	P25654	182 aa	Known RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	UGX2	P32772	223 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	COS9	P36034	407 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	PRY2	P36110	329 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	RCK1	P38622	512 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	SRP68	P38687	599 aa	Known RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	HTD2	P38790	280 aa	Known RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	ALP1	P38971	573 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	SWM2	P40342	146 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	MPM1	P40364	252 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	COA1	P40452	197 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	RRD1	P40454	393 aa	Known RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	ULI1	P43604	169 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	AIM25	P47140	327 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	IBA57	P47158	497 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	FAA4	P47912	694 aa	Known RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	PUS2	P53167	370 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	GPI15	P53961	229 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	ASI3	P53983	676 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	YSA1	Q01976	231 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	VPS28	Q02767	242 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	EMI1	Q04406	187 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	CRF1	Q04930	467 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	THP1	Q08231	455 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	GRE1	Q08969	168 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	TPO4	Q12256	659 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	RPL31A	P0C2H8	113 aa	Known RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	RPL31B	P0C2H9	113 aa	Known RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	NOP1	P15646	327 aa	Known RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	SEC22	P22214	214 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	SGF29	P25554	259 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	IMG2	P25642	146 aa	Predicted RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	SUA7	P29055	345 aa	Predicted RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	LSM2	P38203	95 aa	Known RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	FAT1	P38225	669 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	POG1	P40473	351 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	FMC1	P40491	155 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	BMT5	P40493	336 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	ZAP1	P47043	880 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	GCV1	P48015	400 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	YGR079W	P53249	370 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	FRE4	P53746	719 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	ACT1	P60010	375 aa	Known RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	CYT2	Q00873	224 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	SPP2	Q02521	185 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	EKI1	Q03764	534 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	ECM18	Q04623	453 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	SPR28	Q04921	423 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	HRD3	Q05787	833 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	NUT2	Q06213	157 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	BSC6	Q08280	497 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	NBP2	Q12163	236 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	TIR4	Q12218	487 aa	Predicted RBP	4.25	□□□□□ -1.73
MDR1	YGR100W	SLO1	Q3E784	85 aa		4.25	□□□□□ -1.73
MDR1	YGR100W	ADE4	P04046	510 aa	Known RBP	4.24	□□□□□ -1.73
MDR1	YGR100W	SCH9	P11792	824 aa	Known RBP	4.24	□□□□□ -1.73
MDR1	YGR100W	CPR1	P14832	162 aa	Known RBP	4.24	□□□□□ -1.73
MDR1	YGR100W	EHD3	P28817	500 aa		4.24	□□□□□ -1.73
MDR1	YGR100W	PPG1	P32838	368 aa		4.24	□□□□□ -1.73
MDR1	YGR100W	YPT53	P36019	220 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms