RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	ALK1	P43633	760 aa	Known RBP	0.82	□□□□□ -2.28
UBP3	YER151C	DPB11	P47027	764 aa	Predicted RBP	0.82	□□□□□ -2.28
UBP3	YER151C	CWC23	P52868	283 aa	Predicted RBP	0.82	□□□□□ -2.28
UBP3	YER151C	YGR042W	P53227	271 aa		0.82	□□□□□ -2.28
UBP3	YER151C	ERV29	P53337	310 aa		0.82	□□□□□ -2.28
UBP3	YER151C	TIM8	P57744	87 aa		0.82	□□□□□ -2.28
UBP3	YER151C	YMR114C	Q04471	368 aa	Known RBP	0.82	□□□□□ -2.28
UBP3	YER151C	AIM33	Q04516	312 aa		0.82	□□□□□ -2.28
UBP3	YER151C	PRM6	Q04705	352 aa		0.82	□□□□□ -2.28
UBP3	YER151C	COX20	Q04935	205 aa		0.82	□□□□□ -2.28
UBP3	YER151C	ECI1	Q05871	280 aa		0.82	□□□□□ -2.28
UBP3	YER151C	RRP9	Q06506	573 aa	Known RBP	0.82	□□□□□ -2.28
UBP3	YER151C	YLL056C	Q12177	298 aa		0.82	□□□□□ -2.28
UBP3	YER151C	INP53	Q12271	1107 aa		0.82	□□□□□ -2.28
UBP3	YER151C	UTP23	Q12339	254 aa	Known RBP	0.82	□□□□□ -2.28
UBP3	YER151C	PEX11	Q12462	236 aa		0.82	□□□□□ -2.28
UBP3	YER151C	SCEI	P03882	235 aa		0.81	□□□□□ -2.28
UBP3	YER151C	RPL19A	P0CX82	189 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	RPL19B	P0CX83	189 aa	Predicted RBP	0.81	□□□□□ -2.28
UBP3	YER151C	YHR214C-D	P0CX93	97 aa		0.81	□□□□□ -2.28
UBP3	YER151C	SRV2	P17555	526 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	BOS1	P25385	244 aa		0.81	□□□□□ -2.28
UBP3	YER151C	PAP1	P29468	568 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	AEP1	P32493	518 aa		0.81	□□□□□ -2.28
UBP3	YER151C	CSE2	P33308	149 aa		0.81	□□□□□ -2.28
UBP3	YER151C	TEF4	P36008	412 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	ICS2	P38284	255 aa		0.81	□□□□□ -2.28
UBP3	YER151C	TRR2	P38816	342 aa		0.81	□□□□□ -2.28
UBP3	YER151C	RCY1	P39531	840 aa		0.81	□□□□□ -2.28
UBP3	YER151C	TIF34	P40217	347 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	YIR020C	P40575	100 aa		0.81	□□□□□ -2.28
UBP3	YER151C	YJL213W	P40896	331 aa		0.81	□□□□□ -2.28
UBP3	YER151C	DIM1	P41819	318 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	PAM16	P42949	149 aa		0.81	□□□□□ -2.28
UBP3	YER151C	RPS12	P48589	143 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	IMD4	P50094	524 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	COS10	P52924	374 aa		0.81	□□□□□ -2.28
UBP3	YER151C	YGR017W	P53210	297 aa		0.81	□□□□□ -2.28
UBP3	YER151C	YGR021W	P53212	290 aa		0.81	□□□□□ -2.28
UBP3	YER151C	MTM1	P53320	366 aa		0.81	□□□□□ -2.28
UBP3	YER151C	YNL234W	P53857	426 aa		0.81	□□□□□ -2.28
UBP3	YER151C	YNL181W	P53878	407 aa		0.81	□□□□□ -2.28
UBP3	YER151C	SPO19	Q03029	223 aa		0.81	□□□□□ -2.28
UBP3	YER151C	NHP10	Q03435	203 aa		0.81	□□□□□ -2.28
UBP3	YER151C	RAD30	Q04049	632 aa		0.81	□□□□□ -2.28
UBP3	YER151C	YPR098C	Q06089	161 aa		0.81	□□□□□ -2.28
UBP3	YER151C	VTA1	Q06263	330 aa		0.81	□□□□□ -2.28
UBP3	YER151C	OPY2	Q06810	360 aa		0.81	□□□□□ -2.28
UBP3	YER151C	GRC3	Q07845	632 aa		0.81	□□□□□ -2.28
UBP3	YER151C	BRX1	Q08235	291 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	UAF30	Q08747	228 aa		0.81	□□□□□ -2.28
UBP3	YER151C	FIT2	Q08906	153 aa		0.81	□□□□□ -2.28
UBP3	YER151C	THP3	Q12049	470 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	MCT1	Q12283	360 aa		0.81	□□□□□ -2.28
UBP3	YER151C	RKM5	Q12367	367 aa		0.81	□□□□□ -2.28
UBP3	YER151C	SEY1	Q99287	776 aa		0.81	□□□□□ -2.28
UBP3	YER151C	HSP30	P25619	332 aa		0.81	□□□□□ -2.28
UBP3	YER151C	RPC19	P28000	142 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	GLC7	P32598	312 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	MUD1	P32605	298 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	PHD1	P36093	366 aa		0.81	□□□□□ -2.28
UBP3	YER151C	ETR1	P38071	380 aa		0.81	□□□□□ -2.28
UBP3	YER151C	CAJ1	P39101	391 aa		0.81	□□□□□ -2.28
UBP3	YER151C	YAR029W	P39549	74 aa		0.81	□□□□□ -2.28
UBP3	YER151C	BUR6	P40096	142 aa		0.81	□□□□□ -2.28
UBP3	YER151C	SER33	P40510	469 aa		0.81	□□□□□ -2.28
UBP3	YER151C	PGU1	P47180	361 aa		0.81	□□□□□ -2.28
UBP3	YER151C	TAN1	P53072	289 aa	Predicted RBP	0.81	□□□□□ -2.28
UBP3	YER151C	RSM23	Q01163	450 aa		0.81	□□□□□ -2.28
UBP3	YER151C	RRP45	Q05636	305 aa	Known RBP	0.81	□□□□□ -2.28
UBP3	YER151C	ARR1	Q06596	294 aa		0.81	□□□□□ -2.28
UBP3	YER151C	THI20	Q08224	551 aa		0.81	□□□□□ -2.28
UBP3	YER151C	DAS2	Q12084	232 aa		0.81	□□□□□ -2.28
UBP3	YER151C	AYT1	Q12226	474 aa		0.81	□□□□□ -2.28
UBP3	YER151C	TPO4	Q12256	659 aa		0.81	□□□□□ -2.28
UBP3	YER151C	YLR302C	O13544	120 aa		0.8	□□□□□ -2.28
UBP3	YER151C	RPB5	P20434	215 aa		0.8	□□□□□ -2.28
UBP3	YER151C	TRX2	P22803	104 aa	Known RBP	0.8	□□□□□ -2.28
UBP3	YER151C	HXT3	P32466	567 aa	Known RBP	0.8	□□□□□ -2.28
UBP3	YER151C	CSG2	P35206	410 aa		0.8	□□□□□ -2.28
UBP3	YER151C	VID24	P38263	362 aa		0.8	□□□□□ -2.28
UBP3	YER151C	RFC3	P38629	340 aa		0.8	□□□□□ -2.28
UBP3	YER151C	CCT2	P39076	527 aa	Known RBP	0.8	□□□□□ -2.28
UBP3	YER151C	GAB1	P41733	394 aa		0.8	□□□□□ -2.28
UBP3	YER151C	SPC1	P46965	94 aa		0.8	□□□□□ -2.28
UBP3	YER151C	UPF3	P48412	387 aa	Known RBP	0.8	□□□□□ -2.28
UBP3	YER151C	YGR015C	P53208	328 aa		0.8	□□□□□ -2.28
UBP3	YER151C	SMM1	P53720	384 aa	Known RBP	0.8	□□□□□ -2.28
UBP3	YER151C	ERI1	P62651	68 aa	Known RBP	0.8	□□□□□ -2.28
UBP3	YER151C	SKO1	Q02100	647 aa		0.8	□□□□□ -2.28
UBP3	YER151C	YDC1	Q02896	317 aa		0.8	□□□□□ -2.28
UBP3	YER151C	BUD22	Q04347	519 aa	Known RBP	0.8	□□□□□ -2.28
UBP3	YER151C	RCO1	Q04779	684 aa		0.8	□□□□□ -2.28
UBP3	YER151C	RRT8	Q08219	342 aa		0.8	□□□□□ -2.28
UBP3	YER151C	YCL012C	Q8J0M4	134 aa		0.8	□□□□□ -2.28
UBP3	YER151C	AFI1	Q99222	893 aa		0.8	□□□□□ -2.28
UBP3	YER151C	YBR085C-A	O43137	85 aa		0.8	□□□□□ -2.28
UBP3	YER151C	MCK1	P21965	375 aa	Known RBP	0.8	□□□□□ -2.28
UBP3	YER151C	SAC6	P32599	642 aa	Known RBP	0.8	□□□□□ -2.28
UBP3	YER151C	CLG1	P35190	452 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms