RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W ZRT1P32804 376 aa2.52□□□□□ -2.01
RPN9YDR427W GPX1P36014 167 aa2.52□□□□□ -2.01
RPN9YDR427W LOH1P47055 219 aa2.52□□□□□ -2.01
RPN9YDR427W DIA1P54005 336 aa2.52□□□□□ -2.01
RPN9YDR427W YMR111CQ04461 462 aaPredicted RBP2.52□□□□□ -2.01
RPN9YDR427W RRG8Q06109 277 aa2.52□□□□□ -2.01
RPN9YDR427W VAC14Q06708 880 aa2.52□□□□□ -2.01
RPN9YDR427W HRT1Q08273 121 aa2.52□□□□□ -2.01
RPN9YDR427W VIK1Q12045 647 aa2.52□□□□□ -2.01
RPN9YDR427W DCP1Q12517 231 aaPredicted RBP2.52□□□□□ -2.01
RPN9YDR427W TDH3P00359 332 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
RPN9YDR427W SAR1P20606 190 aaKnown RBP2.51□□□□□ -2.01
RPN9YDR427W MED8P38304 223 aa2.51□□□□□ -2.01
RPN9YDR427W RRF1P38771 230 aa2.51□□□□□ -2.01
RPN9YDR427W SMC2P38989 1170 aaKnown RBP2.51□□□□□ -2.01
RPN9YDR427W EDC2P40023 145 aaPredicted RBP2.51□□□□□ -2.01
RPN9YDR427W VOA1P53262 265 aa2.51□□□□□ -2.01
RPN9YDR427W BIO4P53630 237 aa2.51□□□□□ -2.01
RPN9YDR427W SEC13Q04491 297 aaKnown RBP2.51□□□□□ -2.01
RPN9YDR427W PBP4Q07362 185 aaKnown RBP2.51□□□□□ -2.01
RPN9YDR427W UTP23Q12339 254 aaKnown RBP2.51□□□□□ -2.01
RPN9YDR427W DAL81P21657 970 aa2.5□□□□□ -2.01
RPN9YDR427W RPL5P26321 297 aaKnown RBP2.5□□□□□ -2.01
RPN9YDR427W CSE1P33307 960 aa2.5□□□□□ -2.01
RPN9YDR427W TKL2P33315 681 aa2.5□□□□□ -2.01
RPN9YDR427W AIM29P36154 155 aa2.5□□□□□ -2.01
RPN9YDR427W SDH4P37298 181 aa2.5□□□□□ -2.01
RPN9YDR427W YBR062CP38239 180 aa2.5□□□□□ -2.01
RPN9YDR427W UBC13P52490 153 aa2.5□□□□□ -2.01
RPN9YDR427W UFD1P53044 361 aa2.5□□□□□ -2.01
RPN9YDR427W YNL040WP53960 456 aaPredicted RBP2.5□□□□□ -2.01
RPN9YDR427W CSI1Q04368 295 aa2.5□□□□□ -2.01
RPN9YDR427W YPR063CQ12160 140 aa2.5□□□□□ -2.01
RPN9YDR427W PFK27Q12471 397 aaPredicted RBP2.5□□□□□ -2.01
RPN9YDR427W LAG2Q92325 660 aa2.5□□□□□ -2.01
RPN9YDR427W DBP3P20447 523 aaKnown RBP2.49□□□□□ -2.01
RPN9YDR427W YHL044WP38727 235 aa2.49□□□□□ -2.01
RPN9YDR427W COX16P47081 118 aa2.49□□□□□ -2.01
RPN9YDR427W HSH155P49955 971 aaKnown RBP2.49□□□□□ -2.01
RPN9YDR427W LIF1P53150 421 aa2.49□□□□□ -2.01
RPN9YDR427W ECM18Q04623 453 aa2.49□□□□□ -2.01
RPN9YDR427W DXO1Q06349 442 aa2.49□□□□□ -2.01
RPN9YDR427W APC9Q12107 265 aa2.49□□□□□ -2.01
RPN9YDR427W YPR096CO13587 100 aa2.48□□□□□ -2.01
RPN9YDR427W CDC42P19073 191 aa2.48□□□□□ -2.01
RPN9YDR427W PRE7P23724 241 aaKnown RBP2.48□□□□□ -2.01
RPN9YDR427W IFM1P25038 676 aa2.48□□□□□ -2.01
RPN9YDR427W GCG1P32656 232 aaKnown RBP2.48□□□□□ -2.01
RPN9YDR427W IMP3P32899 183 aaPredicted RBP2.48□□□□□ -2.01
RPN9YDR427W MRPL40P36534 297 aa2.48□□□□□ -2.01
RPN9YDR427W YPC1P38298 316 aa2.48□□□□□ -2.01
RPN9YDR427W VAB2P40003 282 aa2.48□□□□□ -2.01
RPN9YDR427W YFL064CP43540 174 aa2.48□□□□□ -2.01
RPN9YDR427W MPP10P47083 593 aaKnown RBP2.48□□□□□ -2.01
RPN9YDR427W YGR266WP53326 701 aa2.48□□□□□ -2.01
RPN9YDR427W ARP5P53946 755 aa2.48□□□□□ -2.01
RPN9YDR427W SPO19Q03029 223 aa2.48□□□□□ -2.01
RPN9YDR427W SIA1Q12212 622 aa2.48□□□□□ -2.01
RPN9YDR427W IES3Q12345 250 aa2.48□□□□□ -2.01
RPN9YDR427W YAL063C-AQ3E791 96 aa2.48□□□□□ -2.01
RPN9YDR427W RPL31AP0C2H8 113 aaKnown RBP2.47□□□□□ -2.01
RPN9YDR427W UGA1P17649 471 aa2.47□□□□□ -2.01
RPN9YDR427W ALK2P32789 676 aaPredicted RBP2.47□□□□□ -2.01
RPN9YDR427W RPC25P35718 212 aa2.47□□□□□ -2.01
RPN9YDR427W TPO5P36029 618 aa2.47□□□□□ -2.01
RPN9YDR427W VPS45P38932 577 aa2.47□□□□□ -2.01
RPN9YDR427W GCD14P46959 383 aaPredicted RBP2.47□□□□□ -2.01
RPN9YDR427W PNC1P53184 216 aaKnown RBP2.47□□□□□ -2.01
RPN9YDR427W SWC4P53201 476 aa2.47□□□□□ -2.01
RPN9YDR427W IZH4Q99393 312 aa2.47□□□□□ -2.01
RPN9YDR427W RAD7P06779 565 aa2.46□□□□□ -2.02
RPN9YDR427W RPL16BP26785 198 aaKnown RBP2.46□□□□□ -2.02
RPN9YDR427W CDC13P32797 924 aaKnown RBP2.46□□□□□ -2.02
RPN9YDR427W MRPL6P32904 214 aa2.46□□□□□ -2.02
RPN9YDR427W SWD2P36104 329 aaPredicted RBP2.46□□□□□ -2.02
RPN9YDR427W PCL7P40186 285 aa2.46□□□□□ -2.02
RPN9YDR427W GDS1P41913 522 aa2.46□□□□□ -2.02
RPN9YDR427W BUD13P46947 266 aaPredicted RBP2.46□□□□□ -2.02
RPN9YDR427W ERV25P54837 211 aaKnown RBP2.46□□□□□ -2.02
RPN9YDR427W TDH2P00358 332 aaKnown RBP2.45□□□□□ -2.02
RPN9YDR427W GPI12P23797 304 aa2.45□□□□□ -2.02
RPN9YDR427W YCR025CP25352 136 aa2.45□□□□□ -2.02
RPN9YDR427W DAL80P26343 269 aa2.45□□□□□ -2.02
RPN9YDR427W YGL088WP53151 121 aa2.45□□□□□ -2.02
RPN9YDR427W YPL113CQ02961 396 aa2.45□□□□□ -2.02
RPN9YDR427W ERV41Q04651 352 aa2.45□□□□□ -2.02
RPN9YDR427W ARC18Q05933 178 aaKnown RBP2.45□□□□□ -2.02
RPN9YDR427W ATP6P00854 259 aa2.44□□□□□ -2.02
RPN9YDR427W YOL163WP0CF20 169 aa2.44□□□□□ -2.02
RPN9YDR427W MEK1P24719 497 aaPredicted RBP2.44□□□□□ -2.02
RPN9YDR427W MRPL3P36516 390 aa2.44□□□□□ -2.02
RPN9YDR427W MBA1P38300 278 aa2.44□□□□□ -2.02
RPN9YDR427W SYS1P41544 203 aa2.44□□□□□ -2.02
RPN9YDR427W ECO1P43605 281 aa2.44□□□□□ -2.02
RPN9YDR427W GTO1P48239 356 aa2.44□□□□□ -2.02
RPN9YDR427W YGL185CP53100 379 aa2.44□□□□□ -2.02
RPN9YDR427W OSH6Q02201 448 aa2.44□□□□□ -2.02
RPN9YDR427W YPL077CQ02831 240 aa2.44□□□□□ -2.02
RPN9YDR427W BCP1Q06338 283 aa2.44□□□□□ -2.02
RPN9YDR427W YPL278CQ08990 100 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms