RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	COX6	P00427	148 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	NHP6A	P11632	93 aa	Known RBP	4.85	□□□□□ -1.63
DBF4	YDR052C	MIH1	P23748	554 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	BUD5	P25300	642 aa	Predicted RBP	4.85	□□□□□ -1.63
DBF4	YDR052C	YPT53	P36019	220 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	RIB1	P38066	345 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	MGE1	P38523	228 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	RRD1	P40454	393 aa	Known RBP	4.85	□□□□□ -1.63
DBF4	YDR052C	FLX1	P40464	311 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	BMT5	P40493	336 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	YHC3	P47040	408 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	AZR1	P50080	613 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	LCL3	P53153	274 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	YGR079W	P53249	370 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	LSM3	P57743	89 aa	Known RBP	4.85	□□□□□ -1.63
DBF4	YDR052C	TIM8	P57744	87 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	CCE1	Q03702	353 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	YLR225C	Q05948	407 aa	Known RBP	4.85	□□□□□ -1.63
DBF4	YDR052C	YOR378W	Q08902	515 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	AIM45	Q12480	344 aa	Known RBP	4.85	□□□□□ -1.63
DBF4	YDR052C	YKL018C-A	Q3E7A7	99 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	YOR304C-A	O14468	76 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	SAM35	P14693	329 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	EPT1	P22140	391 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	RBK1	P25332	333 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	KIN82	P25341	720 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	YCR015C	P25616	317 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	CDC5	P32562	705 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	SUA5	P32579	426 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	TMT1	P32643	299 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	MRPL11	P36521	249 aa	Predicted RBP	4.85	□□□□□ -1.63
DBF4	YDR052C	CRP1	P38845	465 aa	Known RBP	4.85	□□□□□ -1.63
DBF4	YDR052C	LSM5	P40089	93 aa	Known RBP	4.85	□□□□□ -1.63
DBF4	YDR052C	IME4	P41833	600 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	QRI7	P43122	407 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	YJL171C	P46992	396 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	NET1	P47035	1189 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	OST3	P48439	350 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	TRM9	P49957	279 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	YGR035C	P53222	116 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	YGR126W	P53274	230 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	TRM44	Q02648	567 aa	Known RBP	4.85	□□□□□ -1.63
DBF4	YDR052C	INM2	Q05533	292 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	RNH202	Q05635	350 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	NUS1	Q12063	375 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	SIA1	Q12212	622 aa		4.85	□□□□□ -1.63
DBF4	YDR052C	CDC4	P07834	779 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	SEC22	P22214	214 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	PRE4	P30657	266 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	NTF2	P33331	125 aa	Known RBP	4.84	□□□□□ -1.63
DBF4	YDR052C	TGL1	P34163	548 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	YKL075C	P36083	450 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	ICS2	P38284	255 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	AME1	P38313	324 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	DBP8	P38719	431 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	RPF1	P38805	295 aa	Known RBP	4.84	□□□□□ -1.63
DBF4	YDR052C	FIR1	P40020	876 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	NTA1	P40354	457 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	TIM21	P53220	239 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	YNR061C	P53747	219 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	YKR011C	Q02209	353 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	SPC19	Q03954	165 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	PUS5	Q06244	254 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	BSP1	Q06604	576 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	ATG10	Q07879	167 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	GPM2	Q12008	311 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	SLO1	Q3E784	85 aa		4.84	□□□□□ -1.63
DBF4	YDR052C	ADE4	P04046	510 aa	Known RBP	4.84	□□□□□ -1.64
DBF4	YDR052C	ERG20	P08524	352 aa	Known RBP	4.84	□□□□□ -1.64
DBF4	YDR052C	RPL35A	P0CX84	120 aa	Known RBP	4.84	□□□□□ -1.64
DBF4	YDR052C	RPL35B	P0CX85	120 aa	Known RBP	4.84	□□□□□ -1.64
DBF4	YDR052C	AMD1	P15274	810 aa	Known RBP	4.84	□□□□□ -1.64
DBF4	YDR052C	RER1	P25560	188 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	MET22	P32179	357 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	STE14	P32584	239 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	TRS65	P32893	560 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	PRY2	P36110	329 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	BNA4	P38169	460 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	SRP68	P38687	599 aa	Known RBP	4.84	□□□□□ -1.64
DBF4	YDR052C	SFB3	P38810	929 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	YHR122W	P38829	231 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	PFS1	P38872	237 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	GAA1	P39012	614 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	PRE6	P40303	254 aa	Known RBP	4.84	□□□□□ -1.64
DBF4	YDR052C	SYS1	P41544	203 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	ZAP1	P47043	880 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	PHB2	P50085	310 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	BUD9	P53226	547 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	PKR1	Q03880	122 aa	Known RBP	4.84	□□□□□ -1.64
DBF4	YDR052C	YMR253C	Q04835	414 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	PUN1	Q06991	263 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	PLB3	Q08108	686 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	SUL2	Q12325	893 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	JLP1	Q12358	412 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	RDI1	Q12434	202 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	YPL247C	Q12523	523 aa		4.84	□□□□□ -1.64
DBF4	YDR052C	ECM29	P38737	1868 aa		4.83	□□□□□ -1.64
DBF4	YDR052C	RPS9A	O13516	197 aa	Known RBP	4.83	□□□□□ -1.64
DBF4	YDR052C	RPS9B	P05755	195 aa	Known RBP	4.83	□□□□□ -1.64
DBF4	YDR052C	RIP1	P08067	215 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms