RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	SFH1	Q06168	426 aa		4.28	□□□□□ -1.72
SMP1	YBR182C	TMS1	Q12116	473 aa		4.28	□□□□□ -1.72
SMP1	YBR182C	POX1	P13711	748 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	CBF1	P17106	351 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	YMR31	P19955	123 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	CPR3	P25719	182 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	FUN26	P31381	517 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	YPC1	P38298	316 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	RTC3	P38804	111 aa	Predicted RBP	4.27	□□□□□ -1.73
SMP1	YBR182C	SHC1	P39000	512 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	RPH1	P39956	796 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	PCI8	P40512	444 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	YNL247W	P53852	767 aa	Known RBP	4.27	□□□□□ -1.73
SMP1	YBR182C	RIM13	Q03792	727 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	GAS2	Q06135	555 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	SLM3	Q12093	417 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	SME1	Q12330	94 aa	Predicted RBP	4.27	□□□□□ -1.73
SMP1	YBR182C	TCP1	P12612	559 aa	Known RBP	4.27	□□□□□ -1.73
SMP1	YBR182C	SPS100	P13130	326 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	CBS2	P14905	389 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	APA2	P22108	325 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	RNA14	P25298	677 aa	Known RBP	4.27	□□□□□ -1.73
SMP1	YBR182C	NAM9	P27929	486 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	YIL152W	P40455	235 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	YPT32	P51996	222 aa	Known RBP	4.27	□□□□□ -1.73
SMP1	YBR182C	NBP1	P52919	319 aa	Predicted RBP	4.27	□□□□□ -1.73
SMP1	YBR182C	RMR1	P53060	241 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	VHT1	P53241	593 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	TRM44	Q02648	567 aa	Known RBP	4.27	□□□□□ -1.73
SMP1	YBR182C	YLR446W	Q06204	433 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	MHR1	Q06630	226 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	YDL199C	Q12407	687 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	RAD9	P14737	1309 aa		4.27	□□□□□ -1.73
SMP1	YBR182C	IFM1	P25038	676 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	CHA1	P25379	360 aa	Known RBP	4.26	□□□□□ -1.73
SMP1	YBR182C	YKL187C	P34231	750 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	MRPL10	P36520	322 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	ARC40	P38328	384 aa	Known RBP	4.26	□□□□□ -1.73
SMP1	YBR182C	CUE1	P38428	203 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	MOB2	P43563	287 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	SAD1	P43589	448 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	CDH1	P53197	566 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	CLD1	P53264	445 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	CDC14	Q00684	551 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	TAZ1	Q06510	381 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	ABP140	Q08641	628 aa	Known RBP	4.26	□□□□□ -1.73
SMP1	YBR182C	RSA1	Q08932	381 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	TAF10	Q12030	206 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	YKL183C-A	Q3E765	70 aa		4.26	□□□□□ -1.73
SMP1	YBR182C	CYC3	P06182	269 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	MIR1	P23641	311 aa	Known RBP	4.25	□□□□□ -1.73
SMP1	YBR182C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
SMP1	YBR182C	ATP7	P30902	174 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	ATS1	P31386	333 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	TPS2	P31688	896 aa	Known RBP	4.25	□□□□□ -1.73
SMP1	YBR182C	QRI5	P32344	111 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	LSM12	P38828	187 aa	Known RBP	4.25	□□□□□ -1.73
SMP1	YBR182C	EGD2	P38879	174 aa	Known RBP	4.25	□□□□□ -1.73
SMP1	YBR182C	MET30	P39014	640 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	YER184C	P39961	794 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	YAT2	P40017	923 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	YNL194C	P40169	301 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	USE1	P53146	245 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	PEX31	P53203	462 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	MTM1	P53320	366 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	MAL13	P53338	473 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	YNL095C	P53932	642 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	SUR7	P54003	302 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	EBS1	Q03466	884 aa	Known RBP	4.25	□□□□□ -1.73
SMP1	YBR182C	YDR222W	Q04925	415 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	TAF9	Q05027	157 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	SRO7	Q12038	1033 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	SNU23	Q12368	194 aa	Predicted RBP	4.25	□□□□□ -1.73
SMP1	YBR182C	LAG2	Q92325	660 aa		4.25	□□□□□ -1.73
SMP1	YBR182C	TRP1	P00912	224 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	NAM2	P11325	894 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	SSO1	P32867	290 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	ASK1	P35734	292 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	URA8	P38627	578 aa	Predicted RBP	4.24	□□□□□ -1.73
SMP1	YBR182C	NDT80	P38830	627 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	SMB1	P40018	196 aa	Known RBP	4.24	□□□□□ -1.73
SMP1	YBR182C	PRE6	P40303	254 aa	Known RBP	4.24	□□□□□ -1.73
SMP1	YBR182C	PRM5	P40476	318 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	AIM23	P47015	356 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	WSC2	P53832	503 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	ASI3	P53983	676 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	SEC13	Q04491	297 aa	Known RBP	4.24	□□□□□ -1.73
SMP1	YBR182C	GIM5	Q04493	163 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	DPP1	Q05521	289 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	PEX30	Q06169	523 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	YCT1	Q12235	531 aa		4.24	□□□□□ -1.73
SMP1	YBR182C	MHP1	P43638	1398 aa		4.23	□□□□□ -1.73
SMP1	YBR182C	HTB1	P02293	131 aa	Known RBP	4.23	□□□□□ -1.73
SMP1	YBR182C	HTB2	P02294	131 aa		4.23	□□□□□ -1.73
SMP1	YBR182C	MSI1	P13712	422 aa		4.23	□□□□□ -1.73
SMP1	YBR182C	PEX3	P28795	441 aa		4.23	□□□□□ -1.73
SMP1	YBR182C	URA10	P30402	227 aa		4.23	□□□□□ -1.73
SMP1	YBR182C	HOM6	P31116	359 aa	Known RBP	4.23	□□□□□ -1.73
SMP1	YBR182C	PEX22	P39718	180 aa		4.23	□□□□□ -1.73
SMP1	YBR182C	YND1	P40009	630 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms