RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	UTP25	P40498	721 aa	Known RBP	2.76	□□□□□ -1.97
UBS1	YBR165W	YFL064C	P43540	174 aa		2.76	□□□□□ -1.97
UBS1	YBR165W	OKP1	P53298	406 aa		2.76	□□□□□ -1.97
UBS1	YBR165W	STE23	Q06010	1027 aa		2.76	□□□□□ -1.97
UBS1	YBR165W	DCP1	Q12517	231 aa	Predicted RBP	2.76	□□□□□ -1.97
UBS1	YBR165W	YAL063C-A	Q3E791	96 aa		2.76	□□□□□ -1.97
UBS1	YBR165W	LAG2	Q92325	660 aa		2.76	□□□□□ -1.97
UBS1	YBR165W	VPH1	P32563	840 aa	Known RBP	2.75	□□□□□ -1.97
UBS1	YBR165W	GCG1	P32656	232 aa	Known RBP	2.75	□□□□□ -1.97
UBS1	YBR165W	PES4	P39684	611 aa		2.75	□□□□□ -1.97
UBS1	YBR165W	UTP23	Q12339	254 aa	Known RBP	2.75	□□□□□ -1.97
UBS1	YBR165W	IFM1	P25038	676 aa		2.74	□□□□□ -1.97
UBS1	YBR165W	SMI1	P32566	505 aa		2.74	□□□□□ -1.97
UBS1	YBR165W	MRPL6	P32904	214 aa		2.74	□□□□□ -1.97
UBS1	YBR165W	YKL162C	P36052	402 aa		2.74	□□□□□ -1.97
UBS1	YBR165W	PCL7	P40186	285 aa		2.74	□□□□□ -1.97
UBS1	YBR165W	OSH6	Q02201	448 aa		2.74	□□□□□ -1.97
UBS1	YBR165W	ARC18	Q05933	178 aa	Known RBP	2.74	□□□□□ -1.97
UBS1	YBR165W	MSS116	P15424	664 aa	Known RBP	2.73	□□□□□ -1.97
UBS1	YBR165W	ZRT1	P32804	376 aa		2.73	□□□□□ -1.97
UBS1	YBR165W	ATG12	P38316	186 aa		2.73	□□□□□ -1.97
UBS1	YBR165W	YNL095C	P53932	642 aa		2.73	□□□□□ -1.97
UBS1	YBR165W	PFK27	Q12471	397 aa	Predicted RBP	2.73	□□□□□ -1.97
UBS1	YBR165W	YPS1	P32329	569 aa		2.72	□□□□□ -1.97
UBS1	YBR165W	SWI3	P32591	825 aa		2.72	□□□□□ -1.97
UBS1	YBR165W	YBR062C	P38239	180 aa		2.72	□□□□□ -1.97
UBS1	YBR165W	SYS1	P41544	203 aa		2.72	□□□□□ -1.97
UBS1	YBR165W	RGM1	Q00453	211 aa		2.72	□□□□□ -1.97
UBS1	YBR165W	UBC13	P52490	153 aa		2.71	□□□□□ -1.98
UBS1	YBR165W	TIM22	Q12328	207 aa		2.71	□□□□□ -1.98
UBS1	YBR165W	VPS1	P21576	704 aa	Known RBP	2.7	□□□□□ -1.98
UBS1	YBR165W	CDC13	P32797	924 aa	Known RBP	2.7	□□□□□ -1.98
UBS1	YBR165W	TPO5	P36029	618 aa		2.7	□□□□□ -1.98
UBS1	YBR165W	CAB3	P36076	571 aa		2.7	□□□□□ -1.98
UBS1	YBR165W	MRPL3	P36516	390 aa		2.7	□□□□□ -1.98
UBS1	YBR165W	VAB2	P40003	282 aa		2.7	□□□□□ -1.98
UBS1	YBR165W	YGR266W	P53326	701 aa		2.7	□□□□□ -1.98
UBS1	YBR165W	YPL278C	Q08990	100 aa		2.7	□□□□□ -1.98
UBS1	YBR165W	PRR2	Q12310	699 aa		2.7	□□□□□ -1.98
UBS1	YBR165W	ZWF1	P11412	505 aa	Known RBP	2.69	□□□□□ -1.98
UBS1	YBR165W	SNF6	P18888	332 aa		2.69	□□□□□ -1.98
UBS1	YBR165W	YCR025C	P25352	136 aa		2.69	□□□□□ -1.98
UBS1	YBR165W	BLI1	P35727	113 aa		2.69	□□□□□ -1.98
UBS1	YBR165W	YPC1	P38298	316 aa		2.69	□□□□□ -1.98
UBS1	YBR165W	CDD1	Q06549	142 aa		2.69	□□□□□ -1.98
UBS1	YBR165W	YDL144C	Q07589	356 aa		2.69	□□□□□ -1.98
UBS1	YBR165W	CDC37	P06101	506 aa	Known RBP	2.68	□□□□□ -1.98
UBS1	YBR165W	PHO80	P20052	293 aa		2.68	□□□□□ -1.98
UBS1	YBR165W	IMP3	P32899	183 aa	Predicted RBP	2.68	□□□□□ -1.98
UBS1	YBR165W	CAJ1	P39101	391 aa		2.68	□□□□□ -1.98
UBS1	YBR165W	PRP24	P49960	444 aa	Known RBP	2.68	□□□□□ -1.98
UBS1	YBR165W	SWC4	P53201	476 aa		2.68	□□□□□ -1.98
UBS1	YBR165W	SAM4	Q08985	325 aa	Known RBP	2.68	□□□□□ -1.98
UBS1	YBR165W	PAA1	Q12447	191 aa	Known RBP	2.68	□□□□□ -1.98
UBS1	YBR165W	SPT7	P35177	1332 aa		2.68	□□□□□ -1.98
UBS1	YBR165W	RPL16B	P26785	198 aa	Known RBP	2.67	□□□□□ -1.98
UBS1	YBR165W	MBA1	P38300	278 aa		2.67	□□□□□ -1.98
UBS1	YBR165W	SWC5	P38326	303 aa		2.67	□□□□□ -1.98
UBS1	YBR165W	YGP1	P38616	354 aa	Known RBP	2.67	□□□□□ -1.98
UBS1	YBR165W	MED6	P38782	295 aa		2.67	□□□□□ -1.98
UBS1	YBR165W	AIM20	P40451	204 aa		2.67	□□□□□ -1.98
UBS1	YBR165W	MIG2	P53035	382 aa		2.67	□□□□□ -1.98
UBS1	YBR165W	SYF2	P53277	215 aa	Predicted RBP	2.67	□□□□□ -1.98
UBS1	YBR165W	RSM27	P53305	110 aa		2.67	□□□□□ -1.98
UBS1	YBR165W	CAB5	Q03941	241 aa		2.67	□□□□□ -1.98
UBS1	YBR165W	YBL081W	P38180	368 aa	Known RBP	2.66	□□□□□ -1.98
UBS1	YBR165W	AVT6	P40074	448 aa		2.66	□□□□□ -1.98
UBS1	YBR165W	YIL012W	P40551	113 aa		2.66	□□□□□ -1.98
UBS1	YBR165W	MPP10	P47083	593 aa	Known RBP	2.66	□□□□□ -1.98
UBS1	YBR165W	VPS20	Q04272	221 aa		2.66	□□□□□ -1.98
UBS1	YBR165W	IZH4	Q99393	312 aa		2.66	□□□□□ -1.98
UBS1	YBR165W	HIS3	P06633	220 aa		2.65	□□□□□ -1.99
UBS1	YBR165W	GAL7	P08431	366 aa		2.65	□□□□□ -1.99
UBS1	YBR165W	RPL31A	P0C2H8	113 aa	Known RBP	2.65	□□□□□ -1.99
UBS1	YBR165W	IMP1	P28627	190 aa		2.65	□□□□□ -1.99
UBS1	YBR165W	TRM7	P38238	310 aa	Known RBP	2.65	□□□□□ -1.99
UBS1	YBR165W	FET3	P38993	636 aa		2.65	□□□□□ -1.99
UBS1	YBR165W	GDS1	P41913	522 aa		2.65	□□□□□ -1.99
UBS1	YBR165W	MNN5	P46982	586 aa		2.65	□□□□□ -1.99
UBS1	YBR165W	NNT1	Q05874	261 aa		2.65	□□□□□ -1.99
UBS1	YBR165W	PBP4	Q07362	185 aa	Known RBP	2.65	□□□□□ -1.99
UBS1	YBR165W	PGC1	Q08959	321 aa		2.65	□□□□□ -1.99
UBS1	YBR165W	PET18	P25362	215 aa		2.64	□□□□□ -1.99
UBS1	YBR165W	KRE29	P40026	464 aa		2.64	□□□□□ -1.99
UBS1	YBR165W	CDC40	P40968	455 aa	Predicted RBP	2.64	□□□□□ -1.99
UBS1	YBR165W	ALG9	P53868	555 aa	Known RBP	2.64	□□□□□ -1.99
UBS1	YBR165W	TVP15	Q03860	143 aa		2.64	□□□□□ -1.99
UBS1	YBR165W	MGR3	Q04472	501 aa		2.64	□□□□□ -1.99
UBS1	YBR165W	YDR286C	Q05530	114 aa		2.64	□□□□□ -1.99
UBS1	YBR165W	APC9	Q12107	265 aa		2.64	□□□□□ -1.99
UBS1	YBR165W	YPR1	Q12458	312 aa		2.64	□□□□□ -1.99
UBS1	YBR165W	SSO2	P39926	295 aa		2.63	□□□□□ -1.99
UBS1	YBR165W	YER188W	P40103	239 aa		2.63	□□□□□ -1.99
UBS1	YBR165W	BIO4	P53630	237 aa		2.63	□□□□□ -1.99
UBS1	YBR165W	VMA2	P16140	517 aa	Known RBP	2.62	□□□□□ -1.99
UBS1	YBR165W	TPM1	P17536	199 aa	Known RBP	2.62	□□□□□ -1.99
UBS1	YBR165W	OSM1	P21375	501 aa	Known RBP	2.62	□□□□□ -1.99
UBS1	YBR165W	AEP1	P32493	518 aa		2.62	□□□□□ -1.99
UBS1	YBR165W	OST3	P48439	350 aa		2.62	□□□□□ -1.99
UBS1	YBR165W	ATG5	Q12380	294 aa		2.62	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 83.2 ms