RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 MPP6P53725 186 aaPredicted RBP-2.77□□□□□ -2.85
snR40snR40 PEX10Q05568 337 aa-2.77□□□□□ -2.85
snR40snR40 RKM1Q08961 583 aaPredicted RBP-2.77□□□□□ -2.85
snR40snR40 YLL067CQ07888 1374 aa-2.77□□□□□ -2.85
snR40snR40 OPI3P05375 206 aa-2.78□□□□□ -2.85
snR40snR40 GAL7P08431 366 aa-2.78□□□□□ -2.85
snR40snR40 TOM40P23644 387 aaKnown RBP-2.78□□□□□ -2.85
snR40snR40 NIP1P32497 812 aaKnown RBP-2.78□□□□□ -2.85
snR40snR40 FUI1P38196 639 aa-2.78□□□□□ -2.85
snR40snR40 MBA1P38300 278 aa-2.78□□□□□ -2.85
snR40snR40 NDE1P40215 560 aa-2.78□□□□□ -2.85
snR40snR40 EOS1P53938 366 aa-2.78□□□□□ -2.85
snR40snR40 UBX4P54730 416 aa-2.78□□□□□ -2.85
snR40snR40 TRM82Q03774 444 aa-2.78□□□□□ -2.85
snR40snR40 TVP15Q03860 143 aa-2.78□□□□□ -2.85
snR40snR40 BUG1Q12191 341 aa-2.78□□□□□ -2.85
snR40snR40 MTR10Q99189 972 aa-2.78□□□□□ -2.85
snR40snR40 PAN1P32521 1480 aa-2.78□□□□□ -2.86
snR40snR40 CDC21P06785 304 aa-2.79□□□□□ -2.86
snR40snR40 CCA1P21269 546 aa-2.79□□□□□ -2.86
snR40snR40 MSM1P22438 575 aa-2.79□□□□□ -2.86
snR40snR40 MDH3P32419 343 aaKnown RBP RIP-Chip data-2.79□□□□□ -2.86not detected
snR40snR40 TMA19P35691 167 aaKnown RBP-2.79□□□□□ -2.86
snR40snR40 SNO4Q04902 237 aa-2.79□□□□□ -2.86
snR40snR40 HSP33Q08914 237 aaKnown RBP-2.79□□□□□ -2.86
snR40snR40 HSP32Q08992 237 aa-2.79□□□□□ -2.86
snR40snR40 NOT5Q12514 560 aaPredicted RBP-2.79□□□□□ -2.86
snR40snR40 GSC2P40989 1895 aa-2.79□□□□□ -2.86
snR40snR40 DAL82P21705 255 aa-2.8□□□□□ -2.86
snR40snR40 BEM1P29366 551 aa-2.8□□□□□ -2.86
snR40snR40 VPH2P32341 215 aa-2.8□□□□□ -2.86
snR40snR40 PSY4P38193 441 aa-2.8□□□□□ -2.86
snR40snR40 YJR142WP47173 342 aa-2.8□□□□□ -2.86
snR40snR40 YGR066CP53242 292 aa-2.8□□□□□ -2.86
snR40snR40 DBP6P53734 629 aaKnown RBP-2.8□□□□□ -2.86
snR40snR40 YSA1Q01976 231 aa-2.8□□□□□ -2.86
snR40snR40 RRB1Q04225 511 aaKnown RBP-2.8□□□□□ -2.86
snR40snR40 CCW12Q12127 133 aa-2.8□□□□□ -2.86
snR40snR40 TMA17Q12513 150 aa-2.8□□□□□ -2.86
snR40snR40 NUP157P40064 1391 aaKnown RBP-2.81□□□□□ -2.86
snR40snR40 RPL3P14126 387 aaKnown RBP-2.81□□□□□ -2.86
snR40snR40 RPN12P32496 274 aa-2.81□□□□□ -2.86
snR40snR40 SUR1P33300 382 aa-2.81□□□□□ -2.86
snR40snR40 SRY1P36007 326 aa-2.81□□□□□ -2.86
snR40snR40 TPO5P36029 618 aa-2.81□□□□□ -2.86
snR40snR40 TVP38P36164 337 aa-2.81□□□□□ -2.86
snR40snR40 RRN10P38204 145 aa-2.81□□□□□ -2.86
snR40snR40 SVP26P38869 228 aa-2.81□□□□□ -2.86
snR40snR40 MMF1P40185 145 aaKnown RBP-2.81□□□□□ -2.86
snR40snR40 YKE4P40544 346 aa-2.81□□□□□ -2.86
snR40snR40 HIS6P40545 261 aa-2.81□□□□□ -2.86
snR40snR40 RPE1P46969 238 aa-2.81□□□□□ -2.86
snR40snR40 STE24P47154 453 aa-2.81□□□□□ -2.86
snR40snR40 YGL138CP53122 345 aa-2.81□□□□□ -2.86
snR40snR40 LST7P53237 242 aa-2.81□□□□□ -2.86
snR40snR40 URA2P07259 2214 aaKnown RBP-2.81□□□□□ -2.86
snR40snR40 TOA2P32774 122 aa-2.82□□□□□ -2.86
snR40snR40 PMT4P46971 762 aa-2.82□□□□□ -2.86
snR40snR40 TPC1P53257 314 aa-2.82□□□□□ -2.86
snR40snR40 YKR005CQ02203 525 aa-2.82□□□□□ -2.86
snR40snR40 GAT3Q07928 141 aa-2.82□□□□□ -2.86
snR40snR40 USB1Q12208 290 aaKnown RBP-2.82□□□□□ -2.86
snR40snR40 PSY3Q12318 242 aa-2.82□□□□□ -2.86
snR40snR40 ATO3Q12359 275 aa-2.82□□□□□ -2.86
snR40snR40 YJR112W-AQ3E743 109 aa-2.82□□□□□ -2.86
snR40snR40 RPL16BP26785 198 aaKnown RBP-2.83□□□□□ -2.86
snR40snR40 ERV15P38312 142 aa-2.83□□□□□ -2.86
snR40snR40 MIM1Q08176 113 aa-2.83□□□□□ -2.86
snR40snR40 HSP42Q12329 375 aa-2.83□□□□□ -2.86
snR40snR40 YHR213W-BQ8TGK1 99 aa-2.83□□□□□ -2.86
snR40snR40 TPK3P05986 398 aa-2.84□□□□□ -2.86
snR40snR40 RPL19AP0CX82 189 aaKnown RBP-2.84□□□□□ -2.86
snR40snR40 RPL19BP0CX83 189 aaPredicted RBP-2.84□□□□□ -2.86
snR40snR40 SEC66P33754 206 aa-2.84□□□□□ -2.86
snR40snR40 PEX5P35056 612 aa-2.84□□□□□ -2.86
snR40snR40 AIM29P36154 155 aa-2.84□□□□□ -2.86
snR40snR40 YHL042WP38729 150 aa-2.84□□□□□ -2.86
snR40snR40 PEX17P40155 199 aa-2.84□□□□□ -2.86
snR40snR40 YAE1P47118 141 aaPredicted RBP-2.84□□□□□ -2.86
snR40snR40 MDM1Q01846 1127 aa-2.84□□□□□ -2.86
snR40snR40 YLR030WQ07967 263 aa-2.84□□□□□ -2.86
snR40snR40 TAF10Q12030 206 aa-2.84□□□□□ -2.86
snR40snR40 DST1P07273 309 aa-2.85□□□□□ -2.87
snR40snR40 PCH2P38126 564 aa-2.85□□□□□ -2.87
snR40snR40 YPC1P38298 316 aa-2.85□□□□□ -2.87
snR40snR40 NGL3Q03210 505 aa-2.85□□□□□ -2.87
snR40snR40 VPS72Q03388 795 aa-2.85□□□□□ -2.87
snR40snR40 COG4Q06096 861 aa-2.85□□□□□ -2.87
snR40snR40 FIT2Q08906 153 aa-2.85□□□□□ -2.87
snR40snR40 ATG5Q12380 294 aa-2.85□□□□□ -2.87
snR40snR40 MHP1P43638 1398 aa-2.86□□□□□ -2.87
snR40snR40 BYE1P36106 594 aa-2.86□□□□□ -2.87
snR40snR40 YIL001WP40560 513 aa-2.86□□□□□ -2.87
snR40snR40 GCN20P43535 752 aaKnown RBP-2.86□□□□□ -2.87
snR40snR40 SOL1P50278 321 aa-2.86□□□□□ -2.87
snR40snR40 ARC18Q05933 178 aaKnown RBP-2.86□□□□□ -2.87
snR40snR40 TAZ1Q06510 381 aa-2.86□□□□□ -2.87
snR40snR40 NOP58Q12499 511 aaKnown RBP-2.86□□□□□ -2.87
snR40snR40 ISD11Q6Q560 94 aa-2.86□□□□□ -2.87
snR40snR40 FSH3Q99369 266 aa-2.86□□□□□ -2.87
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms