RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM3, Length 270 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM3	YLR438C-A	YKR015C	P36111	568 aa		11.44	□□□□□ -0.58
LSM3	YLR438C-A	VBA2	P38358	474 aa	Known RBP	11.44	□□□□□ -0.58
LSM3	YLR438C-A	PHO90	P39535	881 aa		11.44	□□□□□ -0.58
LSM3	YLR438C-A	AIM10	P39965	576 aa	Known RBP	11.44	□□□□□ -0.58
LSM3	YLR438C-A	NTA1	P40354	457 aa		11.44	□□□□□ -0.58
LSM3	YLR438C-A	YGL260W	P53056	76 aa		11.44	□□□□□ -0.58
LSM3	YLR438C-A	ATG4	P53867	494 aa		11.44	□□□□□ -0.58
LSM3	YLR438C-A	YDR179W-A	Q03983	463 aa		11.44	□□□□□ -0.58
LSM3	YLR438C-A	MRX10	Q05648	414 aa		11.44	□□□□□ -0.58
LSM3	YLR438C-A	TMS1	Q12116	473 aa		11.44	□□□□□ -0.58
LSM3	YLR438C-A	YAL064W-B	O13512	126 aa		11.43	□□□□□ -0.58
LSM3	YLR438C-A	RPB8	P20436	146 aa		11.43	□□□□□ -0.58
LSM3	YLR438C-A	RPS26A	P39938	119 aa	Known RBP	11.43	□□□□□ -0.58
LSM3	YLR438C-A	RPS26B	P39939	119 aa	Known RBP	11.43	□□□□□ -0.58
LSM3	YLR438C-A	VNX1	P42839	908 aa		11.43	□□□□□ -0.58
LSM3	YLR438C-A	SFH5	P47008	294 aa		11.43	□□□□□ -0.58
LSM3	YLR438C-A	YGR066C	P53242	292 aa		11.43	□□□□□ -0.58
LSM3	YLR438C-A	SCS7	Q03529	384 aa		11.43	□□□□□ -0.58
LSM3	YLR438C-A	YOR343C	Q12484	108 aa		11.43	□□□□□ -0.58
LSM3	YLR438C-A	YGL041W-A	P0C5N3	154 aa		11.42	□□□□□ -0.58
LSM3	YLR438C-A	MRPL16	P38064	232 aa		11.42	□□□□□ -0.58
LSM3	YLR438C-A	PTI1	P39927	425 aa	Predicted RBP	11.42	□□□□□ -0.58
LSM3	YLR438C-A	EFM3	P47163	339 aa		11.42	□□□□□ -0.58
LSM3	YLR438C-A	LYS5	P50113	272 aa		11.42	□□□□□ -0.58
LSM3	YLR438C-A	BRR6	P53062	197 aa		11.42	□□□□□ -0.58
LSM3	YLR438C-A	YGR126W	P53274	230 aa		11.42	□□□□□ -0.58
LSM3	YLR438C-A	MRPL1	Q04599	285 aa		11.42	□□□□□ -0.58
LSM3	YLR438C-A	RBD2	Q12270	262 aa		11.42	□□□□□ -0.58
LSM3	YLR438C-A	GLT1	Q12680	2145 aa	Known RBP	11.41	□□□□□ -0.58
LSM3	YLR438C-A	SEC12	P11655	471 aa		11.41	□□□□□ -0.58
LSM3	YLR438C-A	TAL1	P15019	335 aa	Known RBP	11.41	□□□□□ -0.58
LSM3	YLR438C-A	GAS1	P22146	559 aa	Known RBP	11.41	□□□□□ -0.58
LSM3	YLR438C-A	PAD1	P33751	242 aa	Known RBP RIP-Chip data	11.41	□□□□□ -0.58	not detected
LSM3	YLR438C-A	CHK1	P38147	527 aa		11.41	□□□□□ -0.58
LSM3	YLR438C-A	MLH1	P38920	769 aa		11.41	□□□□□ -0.58
LSM3	YLR438C-A	YER184C	P39961	794 aa		11.41	□□□□□ -0.58
LSM3	YLR438C-A	IES5	P40060	125 aa		11.41	□□□□□ -0.58
LSM3	YLR438C-A	HIS6	P40545	261 aa		11.41	□□□□□ -0.58
LSM3	YLR438C-A	NUP116	Q02630	1113 aa		11.41	□□□□□ -0.58
LSM3	YLR438C-A	PRP3	Q03338	469 aa	Predicted RBP	11.41	□□□□□ -0.58
LSM3	YLR438C-A	EMG1	Q06287	252 aa	Known RBP	11.41	□□□□□ -0.58
LSM3	YLR438C-A	Q0144	Q9ZZW2	109 aa		11.41	□□□□□ -0.58
LSM3	YLR438C-A	CTA1	P15202	515 aa		11.4	□□□□□ -0.58
LSM3	YLR438C-A	MDH1	P17505	334 aa	Known RBP RIP-Chip data	11.4	□□□□□ -0.58	not detected
LSM3	YLR438C-A	SCO1	P23833	295 aa		11.4	□□□□□ -0.58
LSM3	YLR438C-A	SHE1	P38200	338 aa		11.4	□□□□□ -0.58
LSM3	YLR438C-A	DDI1	P40087	428 aa		11.4	□□□□□ -0.58
LSM3	YLR438C-A	FMC1	P40491	155 aa		11.4	□□□□□ -0.58
LSM3	YLR438C-A	POP1	P41812	875 aa		11.4	□□□□□ -0.58
LSM3	YLR438C-A	IRC5	P43610	853 aa		11.4	□□□□□ -0.58
LSM3	YLR438C-A	MNN5	P46982	586 aa		11.4	□□□□□ -0.58
LSM3	YLR438C-A	BPL1	P48445	690 aa	Predicted RBP	11.4	□□□□□ -0.58
LSM3	YLR438C-A	YPR147C	Q06522	304 aa	Known RBP	11.4	□□□□□ -0.58
LSM3	YLR438C-A	RKM1	Q08961	583 aa	Predicted RBP	11.4	□□□□□ -0.58
LSM3	YLR438C-A	FPS1	P23900	669 aa		11.39	□□□□□ -0.59
LSM3	YLR438C-A	ATS1	P31386	333 aa		11.39	□□□□□ -0.59
LSM3	YLR438C-A	MAL32	P38158	584 aa		11.39	□□□□□ -0.59
LSM3	YLR438C-A	YEL057C	P39983	233 aa		11.39	□□□□□ -0.59
LSM3	YLR438C-A	MAL12	P53341	584 aa		11.39	□□□□□ -0.59
LSM3	YLR438C-A	TAZ1	Q06510	381 aa		11.39	□□□□□ -0.59
LSM3	YLR438C-A	YOR238W	Q08634	303 aa		11.39	□□□□□ -0.59
LSM3	YLR438C-A	PBS2	P08018	668 aa		11.38	□□□□□ -0.59
LSM3	YLR438C-A	NFT1	P0CE68	1218 aa		11.38	□□□□□ -0.59
LSM3	YLR438C-A	UTR1	P21373	530 aa		11.38	□□□□□ -0.59
LSM3	YLR438C-A	BAP2	P38084	609 aa		11.38	□□□□□ -0.59
LSM3	YLR438C-A	RIX1	P38883	763 aa	Predicted RBP	11.38	□□□□□ -0.59
LSM3	YLR438C-A	SDP1	P40479	209 aa		11.38	□□□□□ -0.59
LSM3	YLR438C-A	VOA1	P53262	265 aa		11.38	□□□□□ -0.59
LSM3	YLR438C-A	SRP1	Q02821	542 aa	Known RBP	11.38	□□□□□ -0.59
LSM3	YLR438C-A	MAK3	Q03503	176 aa		11.38	□□□□□ -0.59
LSM3	YLR438C-A	FMP45	Q07651	309 aa		11.38	□□□□□ -0.59
LSM3	YLR438C-A	YPL272C	Q08984	517 aa		11.38	□□□□□ -0.59
LSM3	YLR438C-A	YGR161W-C	Q3E744	92 aa		11.38	□□□□□ -0.59
LSM3	YLR438C-A	MDH2	P22133	377 aa		11.37	□□□□□ -0.59
LSM3	YLR438C-A	NFS1	P25374	497 aa		11.37	□□□□□ -0.59
LSM3	YLR438C-A	ADH7	P25377	361 aa		11.37	□□□□□ -0.59
LSM3	YLR438C-A	YCL002C	P25565	263 aa		11.37	□□□□□ -0.59
LSM3	YLR438C-A	RFC4	P40339	323 aa	Known RBP	11.37	□□□□□ -0.59
LSM3	YLR438C-A	NAS2	P40555	220 aa		11.37	□□□□□ -0.59
LSM3	YLR438C-A	VBA4	Q04602	768 aa	Known RBP	11.37	□□□□□ -0.59
LSM3	YLR438C-A	YDL114W	Q07530	308 aa		11.37	□□□□□ -0.59
LSM3	YLR438C-A	IPP1	P00817	287 aa	Known RBP	11.36	□□□□□ -0.59
LSM3	YLR438C-A	KIN28	P06242	306 aa		11.36	□□□□□ -0.59
LSM3	YLR438C-A	STE12	P13574	688 aa		11.36	□□□□□ -0.59
LSM3	YLR438C-A	RPL5	P26321	297 aa	Known RBP	11.36	□□□□□ -0.59
LSM3	YLR438C-A	ERG9	P29704	444 aa		11.36	□□□□□ -0.59
LSM3	YLR438C-A	YIL169C	P40442	995 aa		11.36	□□□□□ -0.59
LSM3	YLR438C-A	YIL165C	P40446	119 aa		11.36	□□□□□ -0.59
LSM3	YLR438C-A	MRPL51	Q06090	140 aa	Predicted RBP	11.36	□□□□□ -0.59
LSM3	YLR438C-A	YLR173W	Q06247	608 aa		11.36	□□□□□ -0.59
LSM3	YLR438C-A	NIP7	Q08962	181 aa	Known RBP	11.36	□□□□□ -0.59
LSM3	YLR438C-A	CPR2	P23285	205 aa		11.35	□□□□□ -0.59
LSM3	YLR438C-A	ECT1	P33412	323 aa		11.35	□□□□□ -0.59
LSM3	YLR438C-A	COS9	P36034	407 aa		11.35	□□□□□ -0.59
LSM3	YLR438C-A	SDS22	P36047	338 aa		11.35	□□□□□ -0.59
LSM3	YLR438C-A	NVJ1	P38881	321 aa		11.35	□□□□□ -0.59
LSM3	YLR438C-A	NOG1	Q02892	647 aa	Known RBP	11.35	□□□□□ -0.59
LSM3	YLR438C-A	BNA7	Q04066	261 aa		11.35	□□□□□ -0.59
LSM3	YLR438C-A	IPK1	Q06667	281 aa		11.35	□□□□□ -0.59
LSM3	YLR438C-A	YDL218W	Q07629	317 aa		11.35	□□□□□ -0.59

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