RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	UBX6	P47049	396 aa		4.24	□□□□□ -1.73
APS1	YLR170C	SPC19	Q03954	165 aa		4.24	□□□□□ -1.73
APS1	YLR170C	RDR1	Q08904	546 aa		4.24	□□□□□ -1.73
APS1	YLR170C	YDL109C	Q12103	647 aa		4.24	□□□□□ -1.73
APS1	YLR170C	RPL7B	Q12213	244 aa	Known RBP	4.24	□□□□□ -1.73
APS1	YLR170C	SWM1	Q12379	170 aa		4.24	□□□□□ -1.73
APS1	YLR170C	YOR343C	Q12484	108 aa		4.24	□□□□□ -1.73
APS1	YLR170C	MHF1	Q3E835	90 aa		4.24	□□□□□ -1.73
APS1	YLR170C	YHR214C-D	P0CX93	97 aa		4.23	□□□□□ -1.73
APS1	YLR170C	NUP1	P20676	1076 aa		4.23	□□□□□ -1.73
APS1	YLR170C	HSP30	P25619	332 aa		4.23	□□□□□ -1.73
APS1	YLR170C	OAC1	P32332	324 aa		4.23	□□□□□ -1.73
APS1	YLR170C	PUP2	P32379	260 aa		4.23	□□□□□ -1.73
APS1	YLR170C	PRP21	P32524	280 aa	Predicted RBP	4.23	□□□□□ -1.73
APS1	YLR170C	JEN1	P36035	616 aa		4.23	□□□□□ -1.73
APS1	YLR170C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
APS1	YLR170C	ARN2	P38724	620 aa		4.23	□□□□□ -1.73
APS1	YLR170C	EGD2	P38879	174 aa	Known RBP	4.23	□□□□□ -1.73
APS1	YLR170C	IPT1	P38954	527 aa		4.23	□□□□□ -1.73
APS1	YLR170C	YJL193W	P39542	402 aa		4.23	□□□□□ -1.73
APS1	YLR170C	YER010C	P40011	234 aa		4.23	□□□□□ -1.73
APS1	YLR170C	SLD3	P53135	668 aa		4.23	□□□□□ -1.73
APS1	YLR170C	TYW3	P53177	273 aa		4.23	□□□□□ -1.73
APS1	YLR170C	RPN14	P53196	417 aa		4.23	□□□□□ -1.73
APS1	YLR170C	HOT1	Q03213	719 aa		4.23	□□□□□ -1.73
APS1	YLR170C	OST6	Q03723	332 aa		4.23	□□□□□ -1.73
APS1	YLR170C	YLR345W	Q06137	509 aa		4.23	□□□□□ -1.73
APS1	YLR170C	NTG2	Q08214	380 aa		4.23	□□□□□ -1.73
APS1	YLR170C	SPC3	Q12133	184 aa		4.23	□□□□□ -1.73
APS1	YLR170C	HER1	Q12276	1246 aa		4.23	□□□□□ -1.73
APS1	YLR170C	PST2	Q12335	198 aa	Known RBP	4.23	□□□□□ -1.73
APS1	YLR170C	PNS1	Q12412	539 aa		4.23	□□□□□ -1.73
APS1	YLR170C	MTR10	Q99189	972 aa		4.23	□□□□□ -1.73
APS1	YLR170C	SOD2	P00447	233 aa		4.22	□□□□□ -1.73
APS1	YLR170C	IPP1	P00817	287 aa	Known RBP	4.22	□□□□□ -1.73
APS1	YLR170C	PEP4	P07267	405 aa	Known RBP	4.22	□□□□□ -1.73
APS1	YLR170C	SAM35	P14693	329 aa		4.22	□□□□□ -1.73
APS1	YLR170C	PHO80	P20052	293 aa		4.22	□□□□□ -1.73
APS1	YLR170C	UTR1	P21373	530 aa		4.22	□□□□□ -1.73
APS1	YLR170C	BUD5	P25300	642 aa	Predicted RBP	4.22	□□□□□ -1.73
APS1	YLR170C	RAD51	P25454	400 aa		4.22	□□□□□ -1.73
APS1	YLR170C	SLC1	P33333	303 aa		4.22	□□□□□ -1.73
APS1	YLR170C	TIF3	P34167	436 aa	Known RBP	4.22	□□□□□ -1.73
APS1	YLR170C	SHM2	P37291	469 aa	Known RBP	4.22	□□□□□ -1.73
APS1	YLR170C	PTC7	P38797	343 aa		4.22	□□□□□ -1.73
APS1	YLR170C	SBE22	P38814	852 aa		4.22	□□□□□ -1.73
APS1	YLR170C	YHR180W	P38868	163 aa		4.22	□□□□□ -1.73
APS1	YLR170C	CHL4	P38907	458 aa		4.22	□□□□□ -1.73
APS1	YLR170C	MLH1	P38920	769 aa		4.22	□□□□□ -1.73
APS1	YLR170C	YEL057C	P39983	233 aa		4.22	□□□□□ -1.73
APS1	YLR170C	PDS1	P40316	373 aa	Predicted RBP	4.22	□□□□□ -1.73
APS1	YLR170C	NTA1	P40354	457 aa		4.22	□□□□□ -1.73
APS1	YLR170C	MPH1	P40562	993 aa		4.22	□□□□□ -1.73
APS1	YLR170C	PHB1	P40961	287 aa		4.22	□□□□□ -1.73
APS1	YLR170C	MNN5	P46982	586 aa		4.22	□□□□□ -1.73
APS1	YLR170C	OGG1	P53397	376 aa	Predicted RBP	4.22	□□□□□ -1.73
APS1	YLR170C	SNF12	P53628	566 aa		4.22	□□□□□ -1.73
APS1	YLR170C	YNR062C	P53748	327 aa		4.22	□□□□□ -1.73
APS1	YLR170C	COS1	P53822	381 aa		4.22	□□□□□ -1.73
APS1	YLR170C	PDR16	P53860	351 aa	Known RBP	4.22	□□□□□ -1.73
APS1	YLR170C	APM1	Q00776	475 aa	Predicted RBP	4.22	□□□□□ -1.73
APS1	YLR170C	YPL039W	Q03080	316 aa		4.22	□□□□□ -1.73
APS1	YLR170C	TLG1	Q03322	224 aa		4.22	□□□□□ -1.73
APS1	YLR170C	SCS7	Q03529	384 aa		4.22	□□□□□ -1.73
APS1	YLR170C	YMD8	Q03697	442 aa		4.22	□□□□□ -1.73
APS1	YLR170C	SNX41	Q04053	625 aa		4.22	□□□□□ -1.73
APS1	YLR170C	VBA4	Q04602	768 aa	Known RBP	4.22	□□□□□ -1.73
APS1	YLR170C	RSA3	Q05942	220 aa	Known RBP	4.22	□□□□□ -1.73
APS1	YLR170C	IRC19	Q07843	230 aa		4.22	□□□□□ -1.73
APS1	YLR170C	UIP4	Q08926	304 aa		4.22	□□□□□ -1.73
APS1	YLR170C	TRM10	Q12400	293 aa		4.22	□□□□□ -1.73
APS1	YLR170C	CDC9	P04819	755 aa		4.21	□□□□□ -1.74
APS1	YLR170C	SNF6	P18888	332 aa		4.21	□□□□□ -1.74
APS1	YLR170C	RPB8	P20436	146 aa		4.21	□□□□□ -1.74
APS1	YLR170C	VPH2	P32341	215 aa		4.21	□□□□□ -1.74
APS1	YLR170C	SSE2	P32590	693 aa	Known RBP	4.21	□□□□□ -1.74
APS1	YLR170C	SUR1	P33300	382 aa		4.21	□□□□□ -1.74
APS1	YLR170C	MDL1	P33310	695 aa		4.21	□□□□□ -1.74
APS1	YLR170C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
APS1	YLR170C	YKL077W	P36081	392 aa		4.21	□□□□□ -1.74
APS1	YLR170C	YMR262W	P38430	313 aa		4.21	□□□□□ -1.74
APS1	YLR170C	YER184C	P39961	794 aa		4.21	□□□□□ -1.74
APS1	YLR170C	HIS6	P40545	261 aa		4.21	□□□□□ -1.74
APS1	YLR170C	REE1	P40893	198 aa		4.21	□□□□□ -1.74
APS1	YLR170C	MSS2	P40990	351 aa		4.21	□□□□□ -1.74
APS1	YLR170C	MSY1	P48527	492 aa		4.21	□□□□□ -1.74
APS1	YLR170C	BSC5	P53755	489 aa		4.21	□□□□□ -1.74
APS1	YLR170C	SRP1	Q02821	542 aa	Known RBP	4.21	□□□□□ -1.74
APS1	YLR170C	FDC1	Q03034	503 aa		4.21	□□□□□ -1.74
APS1	YLR170C	SDC1	Q03323	175 aa		4.21	□□□□□ -1.74
APS1	YLR170C	DML1	Q03652	475 aa		4.21	□□□□□ -1.74
APS1	YLR170C	SNO4	Q04902	237 aa		4.21	□□□□□ -1.74
APS1	YLR170C	HRI1	Q05905	244 aa	Known RBP	4.21	□□□□□ -1.74
APS1	YLR170C	YPR147C	Q06522	304 aa	Known RBP	4.21	□□□□□ -1.74
APS1	YLR170C	MLC2	Q06580	163 aa		4.21	□□□□□ -1.74
APS1	YLR170C	HSP33	Q08914	237 aa	Known RBP	4.21	□□□□□ -1.74
APS1	YLR170C	NIP7	Q08962	181 aa	Known RBP	4.21	□□□□□ -1.74
APS1	YLR170C	HSP32	Q08992	237 aa		4.21	□□□□□ -1.74
APS1	YLR170C	MED11	Q99278	115 aa		4.21	□□□□□ -1.74
APS1	YLR170C	RPS13	P05756	151 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 128 ms