RNA–Protein interactions for RNA: YLR073C

RFU1, Transcript of Protein that inhibits Doa4p deubiquitinating activity, yeast

Gene RFU1, Length 603 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFU1	YLR073C	YAL037W	P39728	267 aa		4.16	□□□□□ -1.74
RFU1	YLR073C	ERG28	P40030	148 aa		4.16	□□□□□ -1.74
RFU1	YLR073C	TFG2	P41896	400 aa	Predicted RBP	4.16	□□□□□ -1.74
RFU1	YLR073C	SWP82	P43554	623 aa		4.16	□□□□□ -1.74
RFU1	YLR073C	TAX4	P47030	604 aa		4.16	□□□□□ -1.74
RFU1	YLR073C	VPS73	P53142	486 aa	Known RBP	4.16	□□□□□ -1.74
RFU1	YLR073C	SWC4	P53201	476 aa		4.16	□□□□□ -1.74
RFU1	YLR073C	YGR168C	P53293	376 aa		4.16	□□□□□ -1.74
RFU1	YLR073C	YNL092W	P53934	400 aa		4.16	□□□□□ -1.74
RFU1	YLR073C	TPO1	Q07824	586 aa		4.16	□□□□□ -1.74
RFU1	YLR073C	YOR365C	Q08844	703 aa		4.16	□□□□□ -1.74
RFU1	YLR073C	SIA1	Q12212	622 aa		4.16	□□□□□ -1.74
RFU1	YLR073C	SWM1	Q12379	170 aa		4.16	□□□□□ -1.74
RFU1	YLR073C	LSO2	Q3E772	92 aa	Known RBP	4.16	□□□□□ -1.74
RFU1	YLR073C	BI3	Q9ZZW7	517 aa		4.16	□□□□□ -1.74
RFU1	YLR073C	ADH2	P00331	348 aa	Known RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	SCEI	P03882	235 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	RPP2A	P05319	106 aa	Known RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	TUB3	P09734	445 aa	Known RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	RPS4A	P0CX35	261 aa	Known RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	RPS4B	P0CX36	261 aa	Known RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	RPB8	P20436	146 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	SCL1	P21243	252 aa	Known RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	CHA1	P25379	360 aa	Known RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	AIM26	P32858	118 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	CTP1	P38152	299 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	BMT2	P38278	337 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	SDH8	P38345	138 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	TDA11	P38854	504 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	CCT2	P39076	527 aa	Known RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	YEL028W	P39989	153 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	YNL194C	P40169	301 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	POG1	P40473	351 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	YJR030C	P47101	745 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	YDL186W	P48568	277 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	CWC23	P52868	283 aa	Predicted RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	TIM13	P53299	105 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	NOP19	P53317	196 aa	Predicted RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	MMT1	Q03218	510 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	VPS60	Q03390	229 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	CTK1	Q03957	528 aa	Known RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	EMI1	Q04406	187 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	PEX10	Q05568	337 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	BER1	Q06688	274 aa	Known RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	SWC7	Q06707	132 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	YPD1	Q07688	167 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	GEP3	Q08622	556 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	MUM3	Q08750	479 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	GRE1	Q08969	168 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	VPS68	Q12016	184 aa		4.15	□□□□□ -1.75
RFU1	YLR073C	TPT1	Q12272	230 aa	Known RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	NOT5	Q12514	560 aa	Predicted RBP	4.15	□□□□□ -1.75
RFU1	YLR073C	YMR31	P19955	123 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	VMA5	P31412	392 aa	Known RBP	4.14	□□□□□ -1.75
RFU1	YLR073C	PRP21	P32524	280 aa	Predicted RBP	4.14	□□□□□ -1.75
RFU1	YLR073C	RPC34	P32910	317 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	TAF14	P35189	244 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	RPL32	P38061	130 aa	Known RBP	4.14	□□□□□ -1.75
RFU1	YLR073C	INM1	P38710	295 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	SBE22	P38814	852 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	HAT2	P39984	401 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	YMR134W	P40207	237 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	YIL054W	P40524	105 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	ATG27	P46989	271 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	YGL117W	P53133	265 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	ZRG17	P53735	605 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	RVB1	Q03940	463 aa	Known RBP	4.14	□□□□□ -1.75
RFU1	YLR073C	YDR109C	Q04585	715 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	ARR3	Q06598	404 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	TEN1	Q07921	160 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	PLB3	Q08108	686 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	ATG9	Q12142	997 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	YOR338W	Q99326	363 aa		4.14	□□□□□ -1.75
RFU1	YLR073C	SEC16	P48415	2195 aa	Known RBP	4.14	□□□□□ -1.75
RFU1	YLR073C	QCR7	P00128	127 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	COR1	P07256	457 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	PCT1	P13259	424 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	SLM5	P25345	492 aa	Known RBP	4.13	□□□□□ -1.75
RFU1	YLR073C	CYS4	P32582	507 aa	Known RBP	4.13	□□□□□ -1.75
RFU1	YLR073C	YPK3	P38070	525 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	LYS1	P38998	373 aa	RIP-Chip data	4.13	□□□□□ -1.75	not detected
RFU1	YLR073C	FRT2	P39734	528 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	ECM10	P39987	644 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	LCP5	P40079	357 aa	Predicted RBP	4.13	□□□□□ -1.75
RFU1	YLR073C	JLP2	P40206	208 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	GAT2	P40209	560 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	COA1	P40452	197 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	POP1	P41812	875 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	RRT5	P43607	289 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	YIP3	P53633	176 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	CWC25	P53854	179 aa	Known RBP	4.13	□□□□□ -1.75
RFU1	YLR073C	ERG13	P54839	491 aa	Known RBP	4.13	□□□□□ -1.75
RFU1	YLR073C	PRP38	Q00723	242 aa	Predicted RBP	4.13	□□□□□ -1.75
RFU1	YLR073C	SKI8	Q02793	397 aa	Predicted RBP	4.13	□□□□□ -1.75
RFU1	YLR073C	NRG1	Q03125	231 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	GRX8	Q05926	109 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	RSA1	Q08932	381 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	CSM4	Q08955	156 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	PFA4	Q12006	378 aa		4.13	□□□□□ -1.75
RFU1	YLR073C	OCA6	Q12454	224 aa		4.13	□□□□□ -1.75

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