RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C FUS3P16892 353 aaKnown RBP10.2□□□□□ -0.78
SPT8YLR055C DTR1P38125 572 aa10.2□□□□□ -0.78
SPT8YLR055C THI2P38141 450 aa10.2□□□□□ -0.78
SPT8YLR055C PTH1P38876 190 aaKnown RBP10.2□□□□□ -0.78
SPT8YLR055C ALP1P38971 573 aa10.2□□□□□ -0.78
SPT8YLR055C LYS1P38998 373 aaRIP-Chip data10.2□□□□□ -0.78not detected
SPT8YLR055C RAD17P48581 401 aa10.2□□□□□ -0.78
SPT8YLR055C DOC1P53068 250 aa10.2□□□□□ -0.78
SPT8YLR055C RHO3Q00245 231 aaKnown RBP10.2□□□□□ -0.78
SPT8YLR055C TPO4Q12256 659 aa10.2□□□□□ -0.78
SPT8YLR055C SNU23Q12368 194 aaPredicted RBP10.2□□□□□ -0.78
SPT8YLR055C YGR161W-CQ3E744 92 aa10.2□□□□□ -0.78
SPT8YLR055C REP2P03872 296 aa10.19□□□□□ -0.78
SPT8YLR055C STE7P06784 515 aa10.19□□□□□ -0.78
SPT8YLR055C YOL162WP0CF19 215 aa10.19□□□□□ -0.78
SPT8YLR055C SEC12P11655 471 aa10.19□□□□□ -0.78
SPT8YLR055C DOA4P32571 926 aa10.19□□□□□ -0.78
SPT8YLR055C YKL077WP36081 392 aa10.19□□□□□ -0.78
SPT8YLR055C MAD2P40958 196 aa10.19□□□□□ -0.78
SPT8YLR055C KAP120Q02932 1032 aa10.19□□□□□ -0.78
SPT8YLR055C HLR1Q04429 423 aa10.19□□□□□ -0.78
SPT8YLR055C SKS1Q12505 502 aa10.19□□□□□ -0.78
SPT8YLR055C ARG80P07249 177 aa10.19□□□□□ -0.78
SPT8YLR055C PDA1P16387 420 aaKnown RBP10.19□□□□□ -0.78
SPT8YLR055C ITR1P30605 584 aa10.19□□□□□ -0.78
SPT8YLR055C MRT4P33201 236 aaKnown RBP10.19□□□□□ -0.78
SPT8YLR055C SFC1P33303 322 aa10.19□□□□□ -0.78
SPT8YLR055C MRPL36P36531 177 aa10.19□□□□□ -0.78
SPT8YLR055C CAT5P41735 233 aa10.19□□□□□ -0.78
SPT8YLR055C UBC9P50623 157 aaPredicted RBP10.19□□□□□ -0.78
SPT8YLR055C YKR011CQ02209 353 aa10.19□□□□□ -0.78
SPT8YLR055C YMR310CQ04867 317 aaPredicted RBP10.19□□□□□ -0.78
SPT8YLR055C CRT10Q08226 957 aa10.19□□□□□ -0.78
SPT8YLR055C INP53Q12271 1107 aa10.19□□□□□ -0.78
SPT8YLR055C YDR262WQ12331 272 aa10.19□□□□□ -0.78
SPT8YLR055C WHI5Q12416 295 aa10.19□□□□□ -0.78
SPT8YLR055C FRE6Q12473 712 aa10.19□□□□□ -0.78
SPT8YLR055C RNQ1P25367 405 aa10.18□□□□□ -0.78
SPT8YLR055C YCR100CP25606 316 aa10.18□□□□□ -0.78
SPT8YLR055C CDC13P32797 924 aaKnown RBP10.18□□□□□ -0.78
SPT8YLR055C PDC2P32896 925 aa10.18□□□□□ -0.78
SPT8YLR055C SRY1P36007 326 aa10.18□□□□□ -0.78
SPT8YLR055C BNA4P38169 460 aa10.18□□□□□ -0.78
SPT8YLR055C RRN10P38204 145 aa10.18□□□□□ -0.78
SPT8YLR055C SDH8P38345 138 aa10.18□□□□□ -0.78
SPT8YLR055C AIM46P38885 310 aa10.18□□□□□ -0.78
SPT8YLR055C SSO2P39926 295 aa10.18□□□□□ -0.78
SPT8YLR055C GID8P40208 455 aa10.18□□□□□ -0.78
SPT8YLR055C CAF16P43569 289 aa10.18□□□□□ -0.78
SPT8YLR055C EAF1Q06337 982 aa10.18□□□□□ -0.78
SPT8YLR055C PIN2Q12057 282 aa10.18□□□□□ -0.78
SPT8YLR055C YOR114WQ12219 294 aa10.18□□□□□ -0.78
SPT8YLR055C YLR108CQ12259 485 aa10.18□□□□□ -0.78
SPT8YLR055C YLR111WQ12528 110 aa10.18□□□□□ -0.78
SPT8YLR055C LSO2Q3E772 92 aaKnown RBP10.18□□□□□ -0.78
SPT8YLR055C RPP1AP05318 106 aaPredicted RBP10.17□□□□□ -0.78
SPT8YLR055C KIN28P06242 306 aa10.17□□□□□ -0.78
SPT8YLR055C AAC3P18238 307 aa10.17□□□□□ -0.78
SPT8YLR055C NAM9P27929 486 aa10.17□□□□□ -0.78
SPT8YLR055C CWP1P28319 239 aa10.17□□□□□ -0.78
SPT8YLR055C TCM62P38228 572 aaKnown RBP10.17□□□□□ -0.78
SPT8YLR055C DMA1P38823 416 aa10.17□□□□□ -0.78
SPT8YLR055C RGA1P39083 1007 aa10.17□□□□□ -0.78
SPT8YLR055C LRO1P40345 661 aa10.17□□□□□ -0.78
SPT8YLR055C RHO4Q00246 291 aa10.17□□□□□ -0.78
SPT8YLR055C CTL1Q03220 320 aaKnown RBP10.17□□□□□ -0.78
SPT8YLR055C DCR2Q05924 578 aa10.17□□□□□ -0.78
SPT8YLR055C RSC58Q07979 502 aa10.17□□□□□ -0.78
SPT8YLR055C YOR289WQ12012 251 aaPredicted RBP10.17□□□□□ -0.78
SPT8YLR055C NRP1P32770 719 aaKnown RBP RIP-Chip data10.17□□□□□ -0.78not detected
SPT8YLR055C ORC2P32833 620 aa10.17□□□□□ -0.78
SPT8YLR055C MET30P39014 640 aa10.17□□□□□ -0.78
SPT8YLR055C KEI1Q06346 221 aa10.17□□□□□ -0.78
SPT8YLR055C PNO1Q99216 274 aaKnown RBP10.17□□□□□ -0.78
SPT8YLR055C DPM1P14020 267 aaKnown RBP10.16□□□□□ -0.78
SPT8YLR055C MTH1P35198 433 aa10.16□□□□□ -0.78
SPT8YLR055C NSG1P38837 291 aa10.16□□□□□ -0.78
SPT8YLR055C YEL068CP39977 110 aa10.16□□□□□ -0.78
SPT8YLR055C SDP1P40479 209 aa10.16□□□□□ -0.78
SPT8YLR055C IDS2P46958 469 aa10.16□□□□□ -0.78
SPT8YLR055C LOH1P47055 219 aa10.16□□□□□ -0.78
SPT8YLR055C IBA57P47158 497 aa10.16□□□□□ -0.78
SPT8YLR055C CDH1P53197 566 aa10.16□□□□□ -0.78
SPT8YLR055C MTQ2Q03920 221 aaPredicted RBP10.16□□□□□ -0.78
SPT8YLR055C RRP40Q08285 240 aaKnown RBP10.16□□□□□ -0.78
SPT8YLR055C TMS1Q12116 473 aa10.16□□□□□ -0.78
SPT8YLR055C SOD2P00447 233 aa10.15□□□□□ -0.78
SPT8YLR055C FUR1P18562 216 aaKnown RBP10.15□□□□□ -0.78
SPT8YLR055C YCR061WP25639 631 aa10.15□□□□□ -0.78
SPT8YLR055C PMT2P31382 759 aa10.15□□□□□ -0.78
SPT8YLR055C ATS1P31386 333 aa10.15□□□□□ -0.78
SPT8YLR055C YMC1P32331 307 aa10.15□□□□□ -0.78
SPT8YLR055C PAU2P32612 120 aa10.15□□□□□ -0.78
SPT8YLR055C YBR238CP38330 731 aaKnown RBP10.15□□□□□ -0.78
SPT8YLR055C YHR097CP38809 366 aaKnown RBP10.15□□□□□ -0.78
SPT8YLR055C TOS2P50078 622 aa10.15□□□□□ -0.78
SPT8YLR055C SAY1P53324 424 aa10.15□□□□□ -0.78
SPT8YLR055C ASI3P53983 676 aa10.15□□□□□ -0.78
SPT8YLR055C ECT1P33412 323 aa10.14□□□□□ -0.79
SPT8YLR055C FMP46P36141 133 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms