RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	YPR1	Q12458	312 aa		3.21	□□□□□ -1.9
PEX1	YKL197C	HKR1	P41809	1802 aa		3.21	□□□□□ -1.9
PEX1	YKL197C	COX2	P00410	251 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	CUP2	P15315	225 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	MRPL44	P19956	98 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	SAG1	P20840	650 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	PRE8	P23639	250 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	PET18	P25362	215 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	RAD14	P28519	371 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	PEX4	P29340	183 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	COS8	P38723	381 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	RPF1	P38805	295 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	PFS1	P38872	237 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	SEO1	P39709	593 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	GLC8	P41818	229 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	PYK2	P52489	506 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	TAD1	P53065	400 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	SWC4	P53201	476 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	SMX3	P54999	86 aa	Predicted RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	DAD3	P69850	94 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	OSH6	Q02201	448 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	YML037C	Q03703	340 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	MRPL35	Q06678	367 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	IWR1	Q07532	353 aa	Predicted RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	NMD4	Q12129	218 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	YRA1	Q12159	226 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	RDL1	Q12305	139 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	WTM1	Q12363	437 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	PTC5	Q12511	572 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	RMP1	Q12530	201 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	NHP6B	P11633	99 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	MAG1	P22134	296 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	EXG1	P23776	448 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	IDH2	P28241	369 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	EHD3	P28817	500 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	APE2	P32454	952 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	CAT2	P32796	670 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	LDB7	P38210	180 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	SLM4	P38247	162 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	MMS21	P38632	267 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	SET5	P38890	526 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	RPA34	P47006	233 aa	Predicted RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	ZAP1	P47043	880 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	SBH2	P52871	88 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	VPS73	P53142	486 aa	Known RBP	3.2	□□□□□ -1.9
PEX1	YKL197C	JLP1	Q12358	412 aa		3.2	□□□□□ -1.9
PEX1	YKL197C	CBP1	P07252	654 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	GCR1	P07261	785 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	PTC6	P25646	442 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	PPA2	P28239	310 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	YPT7	P32939	208 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	RIB5	P38145	238 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	TCM62	P38228	572 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	TRM5	P38793	499 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	VPS52	P39904	641 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	DIM1	P41819	318 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	GUF1	P46943	645 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	YJL118W	P47022	219 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	BIT61	P47041	543 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	IDP3	P53982	420 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	YMR160W	Q03823	816 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	DOT1	Q04089	582 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	YML096W	Q04489	525 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	YPR196W	Q06595	470 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	FSF1	Q12029	327 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	RIB3	Q99258	208 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	THP2	O13539	261 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	YPT1	P01123	206 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	NAM2	P11325	894 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	HEM15	P16622	393 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	PHO80	P20052	293 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	MBR1	P23493	339 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	STP22	P25604	385 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	CPR3	P25719	182 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	RFA3	P26755	122 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	MRPL9	P31334	269 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	SKG6	P32900	734 aa	Predicted RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	LSM4	P40070	187 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	YIR016W	P40572	265 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	PMT4	P46971	762 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	YPT11	P48559	417 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	MGA1	P53050	456 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	YNL260C	P53846	198 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	CRZ1	P53968	678 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	PFA5	Q03289	374 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	CTK1	Q03957	528 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	RRP45	Q05636	305 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	YHC1	Q05900	231 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	SRL2	Q12020	392 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	POM33	Q12164	279 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	RKM5	Q12367	367 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	YKL183C-A	Q3E765	70 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	MEX67	Q99257	599 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	RPL9A	P05738	191 aa	Known RBP	3.19	□□□□□ -1.9
PEX1	YKL197C	YER152C	P10356	443 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	YPT53	P36019	220 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	FRE2	P36033	711 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	YKR051W	P36142	418 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	YBR013C	P38215	129 aa		3.19	□□□□□ -1.9
PEX1	YKL197C	RCK1	P38622	512 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 331.7 ms