RNA–Protein interactions for RNA: YKL054C

DEF1, Transcript of RNAPII degradation factor, yeastyeast

Gene DEF1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEF1YKL054C YJR141WP47172 347 aaPredicted RBP5.31□□□□□ -1.56
DEF1YKL054C MAL13P53338 473 aa5.31□□□□□ -1.56
DEF1YKL054C PRP38Q00723 242 aaPredicted RBP5.31□□□□□ -1.56
DEF1YKL054C YOL073CQ08232 322 aa5.31□□□□□ -1.56
DEF1YKL054C POM33Q12164 279 aa5.31□□□□□ -1.56
DEF1YKL054C YDL009CQ12210 107 aa5.31□□□□□ -1.56
DEF1YKL054C TPT1Q12272 230 aaKnown RBP5.31□□□□□ -1.56
DEF1YKL054C RDL1Q12305 139 aaKnown RBP5.31□□□□□ -1.56
DEF1YKL054C TEF1P02994 458 aaKnown RBP5.3□□□□□ -1.56
DEF1YKL054C MCH2P36032 473 aa5.3□□□□□ -1.56
DEF1YKL054C SPC34P36131 295 aa5.3□□□□□ -1.56
DEF1YKL054C PAC2P39937 518 aa5.3□□□□□ -1.56
DEF1YKL054C BMT5P40493 336 aa5.3□□□□□ -1.56
DEF1YKL054C ASG7P46993 209 aa5.3□□□□□ -1.56
DEF1YKL054C LSM1P47017 172 aaKnown RBP5.3□□□□□ -1.56
DEF1YKL054C ADO1P47143 340 aaKnown RBP5.3□□□□□ -1.56
DEF1YKL054C VAC7P53950 1165 aa5.3□□□□□ -1.56
DEF1YKL054C ECI1Q05871 280 aa5.3□□□□□ -1.56
DEF1YKL054C RPN6Q12377 434 aa5.3□□□□□ -1.56
DEF1YKL054C YLR111WQ12528 110 aa5.3□□□□□ -1.56
DEF1YKL054C MEX67Q99257 599 aaKnown RBP5.3□□□□□ -1.56
DEF1YKL054C EXG1P23776 448 aaKnown RBP5.29□□□□□ -1.56
DEF1YKL054C GIT1P25346 518 aa5.29□□□□□ -1.56
DEF1YKL054C HRR25P29295 494 aaKnown RBP5.29□□□□□ -1.56
DEF1YKL054C YMC1P32331 307 aa5.29□□□□□ -1.56
DEF1YKL054C QRI5P32344 111 aa5.29□□□□□ -1.56
DEF1YKL054C FRE2P36033 711 aa5.29□□□□□ -1.56
DEF1YKL054C CSM2P40465 213 aa5.29□□□□□ -1.56
DEF1YKL054C MIC26P50087 233 aa5.29□□□□□ -1.56
DEF1YKL054C YNL095CP53932 642 aa5.29□□□□□ -1.56
DEF1YKL054C BET5Q03630 159 aa5.29□□□□□ -1.56
DEF1YKL054C ILV1P00927 576 aaKnown RBP5.29□□□□□ -1.56
DEF1YKL054C CAP2P13517 287 aa5.29□□□□□ -1.56
DEF1YKL054C RAD5P32849 1169 aaPredicted RBP5.29□□□□□ -1.56
DEF1YKL054C POP7P38291 140 aa5.29□□□□□ -1.56
DEF1YKL054C YPC1P38298 316 aa5.29□□□□□ -1.56
DEF1YKL054C YHK8P38776 514 aa5.29□□□□□ -1.56
DEF1YKL054C YPT35P38815 214 aaKnown RBP5.29□□□□□ -1.56
DEF1YKL054C COX15P40086 486 aa5.29□□□□□ -1.56
DEF1YKL054C CTK3P46963 296 aaPredicted RBP5.29□□□□□ -1.56
DEF1YKL054C YJR149WP47177 404 aa5.29□□□□□ -1.56
DEF1YKL054C TAF10Q12030 206 aa5.29□□□□□ -1.56
DEF1YKL054C TMS1Q12116 473 aa5.29□□□□□ -1.56
DEF1YKL054C DCN1Q12395 269 aa5.29□□□□□ -1.56
DEF1YKL054C RPS24AP0CX31 135 aaKnown RBP5.28□□□□□ -1.56
DEF1YKL054C RPS24BP0CX32 135 aaKnown RBP5.28□□□□□ -1.56
DEF1YKL054C NAM9P27929 486 aa5.28□□□□□ -1.56
DEF1YKL054C ITR2P30606 609 aa5.28□□□□□ -1.56
DEF1YKL054C TIR2P33890 251 aa5.28□□□□□ -1.56
DEF1YKL054C YKL075CP36083 450 aa5.28□□□□□ -1.56
DEF1YKL054C PMT4P46971 762 aa5.28□□□□□ -1.56
DEF1YKL054C UBC13P52490 153 aa5.28□□□□□ -1.56
DEF1YKL054C ALG13P53178 202 aa5.28□□□□□ -1.56
DEF1YKL054C GND2P53319 492 aa5.28□□□□□ -1.56
DEF1YKL054C ERG13P54839 491 aaKnown RBP5.28□□□□□ -1.56
DEF1YKL054C STP1Q00947 519 aa5.28□□□□□ -1.56
DEF1YKL054C YAP7Q08182 245 aa5.28□□□□□ -1.56
DEF1YKL054C SME1Q12330 94 aaPredicted RBP5.28□□□□□ -1.56
DEF1YKL054C LSO2Q3E772 92 aaKnown RBP5.28□□□□□ -1.56
DEF1YKL054C POM152P39685 1337 aa5.28□□□□□ -1.56
DEF1YKL054C TFS1P14306 219 aa5.28□□□□□ -1.56
DEF1YKL054C YCR100CP25606 316 aa5.28□□□□□ -1.56
DEF1YKL054C GEP4P38812 185 aa5.28□□□□□ -1.56
DEF1YKL054C WWM1P43582 211 aaKnown RBP5.28□□□□□ -1.56
DEF1YKL054C SNX41Q04053 625 aa5.28□□□□□ -1.56
DEF1YKL054C TAZ1Q06510 381 aa5.28□□□□□ -1.56
DEF1YKL054C PFA4Q12006 378 aa5.28□□□□□ -1.56
DEF1YKL054C YCT1Q12235 531 aa5.28□□□□□ -1.56
DEF1YKL054C REP1P03871 373 aa5.27□□□□□ -1.57
DEF1YKL054C PHD1P36093 366 aa5.27□□□□□ -1.57
DEF1YKL054C ATG12P38316 186 aa5.27□□□□□ -1.57
DEF1YKL054C MET30P39014 640 aa5.27□□□□□ -1.57
DEF1YKL054C ODC1Q03028 310 aa5.27□□□□□ -1.57
DEF1YKL054C PEX12Q04370 399 aa5.27□□□□□ -1.57
DEF1YKL054C GLO2Q05584 274 aa5.27□□□□□ -1.57
DEF1YKL054C MHR1Q06630 226 aa5.27□□□□□ -1.57
DEF1YKL054C ESA1Q08649 445 aa5.27□□□□□ -1.57
DEF1YKL054C PER33Q12144 273 aa5.27□□□□□ -1.57
DEF1YKL054C QCR2P07257 368 aa5.27□□□□□ -1.57
DEF1YKL054C HEM1P09950 548 aaPredicted RBP5.27□□□□□ -1.57
DEF1YKL054C SNA3P14359 133 aa5.27□□□□□ -1.57
DEF1YKL054C CBS2P14905 389 aa5.27□□□□□ -1.57
DEF1YKL054C SLY1P22213 666 aa5.27□□□□□ -1.57
DEF1YKL054C TIP1P27654 210 aaPredicted RBP5.27□□□□□ -1.57
DEF1YKL054C FZO1P38297 855 aa5.27□□□□□ -1.57
DEF1YKL054C TDA11P38854 504 aa5.27□□□□□ -1.57
DEF1YKL054C GOR1P53839 350 aa5.27□□□□□ -1.57
DEF1YKL054C YLR460CP54007 376 aa5.27□□□□□ -1.57
DEF1YKL054C SNO1Q03144 224 aa5.27□□□□□ -1.57
DEF1YKL054C YDR209CQ03480 137 aa5.27□□□□□ -1.57
DEF1YKL054C MRPL51Q06090 140 aaPredicted RBP5.27□□□□□ -1.57
DEF1YKL054C IRC10Q08118 586 aa5.27□□□□□ -1.57
DEF1YKL054C JLP1Q12358 412 aa5.27□□□□□ -1.57
DEF1YKL054C WTM1Q12363 437 aaKnown RBP5.27□□□□□ -1.57
DEF1YKL054C BI2P03873 423 aa5.26□□□□□ -1.57
DEF1YKL054C ASP3-2P0CX77 362 aa5.26□□□□□ -1.57
DEF1YKL054C ASP3-3P0CX78 362 aa5.26□□□□□ -1.57
DEF1YKL054C ASP3-4P0CX79 362 aa5.26□□□□□ -1.57
DEF1YKL054C ASP3-1P0CZ17 362 aa5.26□□□□□ -1.57
DEF1YKL054C YBP1P38315 674 aa5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 81 ms